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CsGy3G009825 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G009825
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionChromo domain protein LHP1-like
Genome locationGy14Chr3:7868761..7869587
RNA-Seq ExpressionCsGy3G009825
SyntenyCsGy3G009825
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB70623.1 hypothetical protein L484_023808 [Morus notabilis]3.13e-1850Show/hide
Query:  GPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGLLFLVLY
        GPSP+VP + VG LG++I WP L S+WE + P+L+LG  +A++LL L+LL+H LS +FP L +S   +    +S  G   DGFGFG   ++L LLFLVLY
Subjt:  GPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGLLFLVLY

Query:  YL
         L
Subjt:  YL

KAA0049056.1 chromo domain protein LHP1-like [Cucumis melo var. makuwa]1.09e-5795.41Show/hide
Query:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
        MGY T+GPSPVVPCIIVGFLG+IIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASS TFAVQHSSSPGYDADGFGFGSGAL LGL
Subjt:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL

Query:  LFLVLYYLL
        LFLVLYYLL
Subjt:  LFLVLYYLL

KAG6582549.1 hypothetical protein SDJN03_22551, partial [Cucurbita argyrosperma subsp. sororia]6.89e-2957.8Show/hide
Query:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
        MG+ TAGPSP+VPCIIVGFLGMIIFWPTL SIWES+E LLEL                                 V H+S+PGYD+DGFGFGSG L LGL
Subjt:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL

Query:  LFLVLYYLL
        LFLVLY LL
Subjt:  LFLVLYYLL

KGN56618.1 hypothetical protein Csa_011306 [Cucumis sativus]2.57e-67100Show/hide
Query:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
        MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
Subjt:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL

Query:  LFLVLYYLL
        LFLVLYYLL
Subjt:  LFLVLYYLL

TYK17507.1 chromo domain protein LHP1-like [Cucumis melo var. makuwa]1.11e-5795.41Show/hide
Query:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
        MGY T+GPSPVVPCIIVGFLG+IIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASS TFAVQHSSSPGYDADGFGFGSGAL LGL
Subjt:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL

Query:  LFLVLYYLL
        LFLVLYYLL
Subjt:  LFLVLYYLL

TrEMBL top hitse value%identityAlignment
A0A0A0L4E9 Uncharacterized protein1.25e-67100Show/hide
Query:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
        MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
Subjt:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL

Query:  LFLVLYYLL
        LFLVLYYLL
Subjt:  LFLVLYYLL

A0A2P5EPJ7 Uncharacterized protein2.45e-1854.81Show/hide
Query:  GPSPVVPCIIVGFLGMIIFWPTLSSIW-ESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGLLFLVL
        GPSP+VP ++VG LG+II  P L S+W + I PLLE+G  VA+++L LLLLVH +S  FP    SSS FA   +S   YD DGF  G    LL LLFLVL
Subjt:  GPSPVVPCIIVGFLGMIIFWPTLSSIW-ESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGLLFLVL

Query:  YYLL
        Y LL
Subjt:  YYLL

A0A5A7U472 Chromo domain protein LHP1-like5.28e-5895.41Show/hide
Query:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
        MGY T+GPSPVVPCIIVGFLG+IIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASS TFAVQHSSSPGYDADGFGFGSGAL LGL
Subjt:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL

Query:  LFLVLYYLL
        LFLVLYYLL
Subjt:  LFLVLYYLL

A0A5D3D0R0 Chromo domain protein LHP1-like5.39e-5895.41Show/hide
Query:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL
        MGY T+GPSPVVPCIIVGFLG+IIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASS TFAVQHSSSPGYDADGFGFGSGAL LGL
Subjt:  MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGL

Query:  LFLVLYYLL
        LFLVLYYLL
Subjt:  LFLVLYYLL

W9R577 Uncharacterized protein1.51e-1850Show/hide
Query:  GPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGLLFLVLY
        GPSP+VP + VG LG++I WP L S+WE + P+L+LG  +A++LL L+LL+H LS +FP L +S   +    +S  G   DGFGFG   ++L LLFLVLY
Subjt:  GPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGLLFLVLY

Query:  YL
         L
Subjt:  YL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATATGCTACTGCAGGTCCATCTCCTGTTGTACCTTGTATCATAGTTGGATTTCTGGGGATGATAATATTTTGGCCTACTCTTTCATCCATCTGGGAAAGCATAGA
GCCTCTACTTGAACTGGGCATTTGGGTTGCAGTGATTCTTCTTTTCCTCTTACTGCTTGTACACTTTCTTTCTATATTCTTTCCCGTTCTTCATGCTTCTTCATCCACTT
TTGCAGTTCAGCATTCCAGCAGCCCTGGCTACGATGCTGATGGATTCGGTTTCGGGTCAGGAGCATTGCTTCTAGGTCTTCTCTTCCTTGTCCTCTATTATCTGTTGTAA
mRNA sequenceShow/hide mRNA sequence
TTCTTATGGTACCTGATTATCCATCTTACTTGGCATAGACTAGACCATCATGACCCACAAAGATACATACATTGTCTCCTTTCTATTTCTTTCAATTGATAAGTAATTAG
TTACTCATCAAGCTTTAAACAGTTTGCTCGGGTTGGCATCCAATCCAACCTATATTCTCTATAAGACGTGATTAAATAAACTGAAATTCTCTAGTCTTCGTCATTGATCA
ACTAATATGCTGACCTTCACAAAGCATGAAAAGAAGCGAAGCTTTTCCAAAGTCACTCCTACCACCAACAAACAGCCTTTTCCCCTCTCAATATCACTCTTTTGCAACCC
AAAGTTCTGATTCAGAGAAAGATAATGGGATATGCTACTGCAGGTCCATCTCCTGTTGTACCTTGTATCATAGTTGGATTTCTGGGGATGATAATATTTTGGCCTACTCT
TTCATCCATCTGGGAAAGCATAGAGCCTCTACTTGAACTGGGCATTTGGGTTGCAGTGATTCTTCTTTTCCTCTTACTGCTTGTACACTTTCTTTCTATATTCTTTCCCG
TTCTTCATGCTTCTTCATCCACTTTTGCAGTTCAGCATTCCAGCAGCCCTGGCTACGATGCTGATGGATTCGGTTTCGGGTCAGGAGCATTGCTTCTAGGTCTTCTCTTC
CTTGTCCTCTATTATCTGTTGTAATCCTATCCTAGTACTAGCATAATATAGCTTTTTCTTATCACTTCCACATGTATGCTTTTGTATACATATTCAGTTATCCATCTCTC
TTGCTAGTAGGCAAAGTGACTTACTTTGACCAACAAGAGAACAAGCCCTCTCCATGG
Protein sequenceShow/hide protein sequence
MGYATAGPSPVVPCIIVGFLGMIIFWPTLSSIWESIEPLLELGIWVAVILLFLLLLVHFLSIFFPVLHASSSTFAVQHSSSPGYDADGFGFGSGALLLGLLFLVLYYLL