CuGenDBv2

Gene ID	CsGy3G009890
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	TF-B3 domain-containing protein
Genome location	Gy14Chr3:7907741..7911038
RNA-Seq Expression	CsGy3G009890
Synteny	CsGy3G009890
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR003340 - B3 DNA binding domain IPR015300 - DNA-binding pseudobarrel domain superfamily IPR044837 - B3 domain-containing protein REM16-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011650806.1 B3 domain-containing protein Os04g0386900 [Cucumis sativus]

9.17e-104

100

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

XP_022941967.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata]

4.43e-77

75.51

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQS  KPP E   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+IPAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDA VFEL+ECSSS++KFRVQIL GDIP ELH+KFSGE++ TPI +D
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

XP_022974195.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima]

2.67e-78

76.87

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQS  KPPTE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+IPAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDA VFEL+ECSSS+LKFRVQIL GDIP ELH+KFSGE++ TPI +D
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

XP_023539026.1 B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo]

1.09e-77

75.51

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQS  KPPTE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ +PAKFHS+LPAI+IPAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDA VFEL+ECSSS++KFRVQIL GDIP ELH+KFSGE++ TPI +D
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

XP_038903804.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida]

1.63e-88

86.39

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQS RKPPTELPTMEPQ+GE +PLSGKPYHAFILSKSHVAPI +LVLPAKFHSILPAIVIPAVL C+GKKW IDY+GNRRGKALD+KQWRKFVNDN LKS
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDA VFEL+ECSSSILKFRVQIL GDIP +LHDKFSGETK+TPI+L+
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3V3 TF-B3 domain-containing protein

4.44e-104

100

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

A0A5D3D009 B3 domain-containing protein

1.24e-66

97.06

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Query:  VLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIH
        VLPAKFHSILPAIVIPAVLLCRGKKWKIDY+GNRRGKALDSKQWRKFVNDNCLKSGDA VFELLECSSSILKFRVQIL GDIPLELHDKFSGETKETPIH
Subjt:  VLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIH

Query:  LD
        LD
Subjt:  LD

A0A6J1D033 B3 domain-containing protein Os04g0386900-like

1.68e-74

72.79

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQS  KPP+E  TMEP+N E  PLS KP+H  IL+KSHVAPIYN+ LPAKFHS+LPAIVI  VL C GK+W +DY+GNRRGK+LD++ WRKFVNDN LKS
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDA VFEL+ECSSS LKFRVQIL GDIP++LHDKFSGE+K+TPI +D
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

A0A6J1FTK2 B3 domain-containing protein Os04g0386900-like

2.14e-77

75.51

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQS  KPP E   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+IPAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDA VFEL+ECSSS++KFRVQIL GDIP ELH+KFSGE++ TPI +D
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

A0A6J1IDC2 B3 domain-containing protein Os04g0386900-like

1.29e-78

76.87

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Query:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS
        MQS  KPPTE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+IPAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        GDA VFEL+ECSSS+LKFRVQIL GDIP ELH+KFSGE++ TPI +D
Subjt:  GDAIVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

SwissProt top hits

e value

%identity

Alignment

Q7XLP4 B3 domain-containing protein Os04g0386900

1.1e-19

38.62

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Query:  KPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIV
        +PP   P    ++G  +PL GKPY   I+ KSHV P + +V+P  F  +LP+   PA L  RG+ W + + G R  + L++  WR F  DN L+ GD  V
Subjt:  KPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIV

Query:  FELL---ECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD
        FELL         ++FRVQ+L  +IP  +  +  G T  TPI +D
Subjt:  FELL---ECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

Q9LHY9 B3 domain-containing protein Os06g0112300

2.8e-12

35.46

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Query:  PPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSIL--PAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAI
        PP    + E     T   +G P+   +++KSH+ P + + +P +F   L  P     AVL   GK W   Y G+ + K LD+  W +F  DN L  GDA 
Subjt:  PPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSIL--PAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAI

Query:  VFELLEC-SSSILKFRVQILSGDIPLELHDKFSGETKETPI
        VFEL+   ++  L+F+VQIL G +P E+     G T + PI
Subjt:  VFELLEC-SSSILKFRVQILSGDIPLELHDKFSGETKETPI

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCAGTCAGCAAGGAAACCTCCGACAGAGCTTCCAACAATGGAGCCGCAAAATGGAGAAACTATGCCACTTTCGGGCAAACCCTACCATGCTTTTATTCTTTCTAAATC
GCATGTTGCTCCCATATATAATTTGGTTTTACCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCTGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAG
ATTATCATGGAAACCGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCTGGAGATGCTATTGTATTTGAGCTCTTGGAG
TGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGTGGTGACATACCTTTGGAGCTGCACGACAAGTTTAGTGGGGAGACAAAAGAGACTCCCATACACCTTGA
CTAG

mRNA sequence

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TTCACGTCATCTCGCAAGAATGAATGATCTGAAGAAAATACGGCGACTGATTGTCTCTCCATCTGCTTCCTTCGAGCCCACAGGTTTTTCCCCCTACCTGTAATCGGCAA
TTCATACGTTGTCCCATTTGTAAGCTTCTGCAAGTGATTTGTACTGAAAAAAGGTCCGCAGATGCAGTCAGCAAGGAAACCTCCGACAGAGCTTCCAACAATGGAGCCGC
AAAATGGAGAAACTATGCCACTTTCGGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTTTTACCGGCTAAATTTCATTCT
ATTTTACCTGCTATTGTCATCCCTGCTGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATCATGGAAACCGACGTGGTAAGGCACTCGATTCAAAACAGTGGAG
GAAATTTGTTAATGATAATTGTCTCAAATCTGGAGATGCTATTGTATTTGAGCTCTTGGAGTGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGTGGTGACA
TACCTTTGGAGCTGCACGACAAGTTTAGTGGGGAGACAAAAGAGACTCCCATACACCTTGACTAGCTTCCCTTTCAGTGGTTTCGTAGTTTTCTCAAAAGTCCTGACTTG
TTGACATCATATTGCGGCTCTAGAATCAGACAGCCTATTTGATAATTTTAGTTCTTTAACCAAGATGGTTCTGGTGCTGCAATGAAGTTGTGCTTCCTCATGAGACGTGC
AATGCATTATGTTATTTGTGTTCTTATGCCAAATGCACCAGGGTATATAGTTAACATGTAGATCCATTTTTCATTGTCATGACCCACACATCTTCATATTGTTGTTAAAT
CTTGAATCTCAATCTGCTTTCCACTTTGTATTTCTTCAACCTTCTGCTCTGAAATCTAGATTGCATAAATTGTCCCAACGTCATCATCGTTTTGCATTGATACAGCCATT
GTTTGGCAATTGTTTCTATTTTGATGTGAGAACTTTCAGAAATCTAGATTGTCCACCGATGCACGGTGACCTTTGTGTGTAGACATTTTCTTTGATGTGATAATGGTCAA
GCCATACAATATCAC

Protein sequence

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MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLE
CSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD

CsGy3G009890 (gene) of Cucumber (Gy14) v2.1 genome