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CsGy3G010070 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G010070
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationGy14Chr3:8008529..8009420
RNA-Seq ExpressionCsGy3G010070
SyntenyCsGy3G010070
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134355.1 late embryogenesis abundant protein 6 [Cucumis sativus]8.18e-72100Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM
        MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM

Query:  VGAPGTVDMAGAPSPVNKKLL
        VGAPGTVDMAGAPSPVNKKLL
Subjt:  VGAPGTVDMAGAPSPVNKKLL

XP_008438228.1 PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]1.90e-6694.31Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  VPVAPGM
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

XP_022924652.1 late embryogenesis abundant protein 6-like [Cucurbita moschata]7.14e-4777.87Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT
        MQAVR+KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FV+PG GTTT    +V  APG+T
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDMAG P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

XP_023526293.1 late embryogenesis abundant protein 6-like isoform X2 [Cucurbita pepo subsp. pepo]1.01e-4677.87Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT
        MQAVR+KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+THTN FV+PG GTTT     V  APG+T
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDM G P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

XP_038878054.1 late embryogenesis abundant protein 6-like [Benincasa hispida]4.60e-5382.79Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLP-DYSVPVAPGMT
        MQAV++KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEM KYA+THT+TFV+PGGT  L     + VAPG+T
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLP-DYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        +V APGTV+MAGAP PVNKKLL
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein3.96e-72100Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM
        MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM

Query:  VGAPGTVDMAGAPSPVNKKLL
        VGAPGTVDMAGAPSPVNKKLL
Subjt:  VGAPGTVDMAGAPSPVNKKLL

A0A1S3AWI7 uncharacterized protein LOC1034833979.19e-6794.31Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  VPVAPGM
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

A0A5A7U624 Late embryogenesis abundant protein9.19e-6794.31Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  VPVAPGM
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

A0A6J1ED39 late embryogenesis abundant protein 6-like3.46e-4777.87Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT
        MQAVR+KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FV+PG GTTT    +V  APG+T
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDMAG P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

A0A6J1IRE5 late embryogenesis abundant protein 6-like1.40e-4677.05Show/hide
Query:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT
        MQAVR+KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FV+PG GTTT    +V  APG+T
Subjt:  MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDM G P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 61.2e-0545.57Show/hide
Query:  MQAVREKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ ++K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVREKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH

Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein8.8e-0745.57Show/hide
Query:  MQAVREKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ ++K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVREKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCAGTTAGGGAGAAGCTACACGATATGAGCGTCATGCGTAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGA
AGTGGCTCATGAGGTAAGATTGGCACGAGAGGCTGAAGCTGCGATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTC
ACACCAATACCTTTGTGTCTCCTGGTGGAACCACCACCCTTCCTGATTACTCCGTACCAGTAGCTCCCGGCATGACTATGGTTGGAGCCCCTGGCACCGTCGACATGGCC
GGAGCTCCTTCTCCCGTTAATAAGAAGTTACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCAGTTAGGGAGAAGCTACACGATATGAGCGTCATGCGTAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGA
AGTGGCTCATGAGGTAAGATTGGCACGAGAGGCTGAAGCTGCGATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTC
ACACCAATACCTTTGTGTCTCCTGGTGGAACCACCACCCTTCCTGATTACTCCGTACCAGTAGCTCCCGGCATGACTATGGTTGGAGCCCCTGGCACCGTCGACATGGCC
GGAGCTCCTTCTCCCGTTAATAAGAAGTTACTGTAA
Protein sequenceShow/hide protein sequence
MQAVREKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTMVGAPGTVDMA
GAPSPVNKKLL