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CsGy3G011055 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G011055
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionF-box domain-containing protein
Genome locationGy14Chr3:8637769..8638360
RNA-Seq ExpressionCsGy3G011055
SyntenyCsGy3G011055
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134006.3 putative F-box protein PP2-B12 [Cucumis sativus]6.35e-1242.45Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE
         YFVFKL ED +    F+ RPVSLEVHFEG EV EDG K++I                                DG +            KGGLIVEGIE
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE

Query:  IRPKYD
        IRPKYD
Subjt:  IRPKYD

XP_004134378.3 putative F-box protein PP2-B12 [Cucumis sativus]1.22e-1949.52Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTK-------------------------------------------KMIDGIVKGGLIVEGIEI
         YFVFK KE  FQHD F T+PVSLEV+FEGEEVGEDGTK                                           K IDGI+KGGLIVEGIEI
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTK-------------------------------------------KMIDGIVKGGLIVEGIEI

Query:  RPKYD
        RPKYD
Subjt:  RPKYD

XP_008438376.1 PREDICTED: putative F-box protein PP2-B12 [Cucumis melo]8.87e-1140.57Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE
         YFVFKL  D +    F+ RPVSLEVHFEG EV E+GTK++I                                DG +            KGGLIVEGI+
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE

Query:  IRPKYD
        IRPKYD
Subjt:  IRPKYD

XP_011650883.2 putative F-box protein PP2-B12 [Cucumis sativus]4.55e-1140.95Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI-------------------------------------------DGIVKGGLIVEGIEI
         YFVFKL ED F    FET PVSLEVHFEG EV ED  K++I                                           D + KGGLIVEG+EI
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI-------------------------------------------DGIVKGGLIVEGIEI

Query:  RPKYD
        RPKY+
Subjt:  RPKYD

XP_038905036.1 LOW QUALITY PROTEIN: putative F-box protein PP2-B12 [Benincasa hispida]1.20e-0839.62Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DG------------IVKGGLIVEGIE
         YFVF L E+ +    F+ RPVSLEVHFEG EV E+G K++I                                DG            I KGGLIVEGIE
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DG------------IVKGGLIVEGIE

Query:  IRPKYD
        IRPK D
Subjt:  IRPKYD

TrEMBL top hitse value%identityAlignment
A0A0A0L445 F-box domain-containing protein4.51e-1948.57Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTK-------------------------------------------KMIDGIVKGGLIVEGIEI
         YFVFK KE  FQHD F T+PVSLEV+FEGEEVGEDGTK                                           K IDGI+KGGLIVEGIEI
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTK-------------------------------------------KMIDGIVKGGLIVEGIEI

Query:  RPKYD
         PKYD
Subjt:  RPKYD

A0A0A0L6T0 F-box domain-containing protein3.07e-1242.45Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE
         YFVFKL ED +    F+ RPVSLEVHFEG EV EDG K++I                                DG +            KGGLIVEGIE
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE

Query:  IRPKYD
        IRPKYD
Subjt:  IRPKYD

A0A0A0L9G5 F-box domain-containing protein2.20e-1140.95Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI-------------------------------------------DGIVKGGLIVEGIEI
         YFVFKL ED F    FET PVSLEVHFEG EV ED  K++I                                           D + KGGLIVEG+EI
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI-------------------------------------------DGIVKGGLIVEGIEI

Query:  RPKYD
        RPKY+
Subjt:  RPKYD

A0A1S3AW73 putative F-box protein PP2-B124.29e-1140.57Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE
         YFVFKL  D +    F+ RPVSLEVHFEG EV E+GTK++I                                DG +            KGGLIVEGI+
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE

Query:  IRPKYD
        IRPKYD
Subjt:  IRPKYD

A0A5A7U6B1 Putative F-box protein PP2-B124.29e-1140.57Show/hide
Query:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE
         YFVFKL  D +    F+ RPVSLEVHFEG EV E+GTK++I                                DG +            KGGLIVEGI+
Subjt:  TYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMI--------------------------------DGIV------------KGGLIVEGIE

Query:  IRPKYD
        IRPKYD
Subjt:  IRPKYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACACTTATTTTGTGTTCAAGCTTAAGGAAGACGGTTTCCAGCACGATGAGTTTGAAACAAGACCTGTTTCATTAGAAGTTCATTTTGAAGGAGAAGAGGTTGGAGA
AGATGGAACGAAGAAAATGATTGATGGCATAGTCAAAGGTGGGTTAATTGTTGAAGGAATTGAGATTAGACCTAAATATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACACTTATTTTGTGTTCAAGCTTAAGGAAGACGGTTTCCAGCACGATGAGTTTGAAACAAGACCTGTTTCATTAGAAGTTCATTTTGAAGGAGAAGAGGTTGGAGA
AGATGGAACGAAGAAAATGATTGATGGCATAGTCAAAGGTGGGTTAATTGTTGAAGGAATTGAGATTAGACCTAAATATGATTAG
Protein sequenceShow/hide protein sequence
MYTYFVFKLKEDGFQHDEFETRPVSLEVHFEGEEVGEDGTKKMIDGIVKGGLIVEGIEIRPKYD