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CsGy3G012290 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G012290
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionHR-like lesion-inducer
Genome locationGy14Chr3:9298625..9300771
RNA-Seq ExpressionCsGy3G012290
SyntenyCsGy3G012290
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008637 - HR-like lesion-inducer


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049272.1 uncharacterized protein E6C27_scaffold171G005120 [Cucumis melo var. makuwa]6.91e-1785.19Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKVAVLRRNLSSKL 
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
KGN56911.2 hypothetical protein Csa_009884 [Cucumis sativus]1.50e-65100Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVAVLRRNLSSKLGLLYLILMSDMWLVFHYLSKGLELFYLFWAQELELIFCFFTWLLSLRFFS
        MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVAVLRRNLSSKLGLLYLILMSDMWLVFHYLSKGLELFYLFWAQELELIFCFFTWLLSLRFFS
Subjt:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVAVLRRNLSSKLGLLYLILMSDMWLVFHYLSKGLELFYLFWAQELELIFCFFTWLLSLRFFS

Query:  ISSTLVY
        ISSTLVY
Subjt:  ISSTLVY
TYK17285.1 uncharacterized protein E5676_scaffold434G001390 [Cucumis melo var. makuwa]7.42e-1785.19Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKVAVLRRNLSSKL 
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
XP_008438551.1 PREDICTED: uncharacterized protein LOC103483616 isoform X2 [Cucumis melo]6.91e-1785.19Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKVAVLRRNLSSKL 
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
XP_038877357.1 uncharacterized protein LOC120069646 [Benincasa hispida]4.04e-1785.19Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
        MGFFS LGRLLFAS FILSA QMFN   NNGGPAA E SSKVAVLRRNLSSKLG
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
TrEMBL top hitse value%identityAlignment
A0A0A0L767 Uncharacterized protein3.29e-16100Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKV
        MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKV
Subjt:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKV
A0A1S3AXB3 uncharacterized protein LOC103483616 isoform X23.35e-1785.19Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKVAVLRRNLSSKL 
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
A0A1S3AXB4 uncharacterized protein LOC103483616 isoform X13.59e-1785.19Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKVAVLRRNLSSKL 
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
A0A5A7U0G2 Uncharacterized protein3.35e-1785.19Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKVAVLRRNLSSKL 
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
A0A5D3D0P1 Uncharacterized protein3.59e-1785.19Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKVAVLRRNLSSKL 
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKVAVLRRNLSSKLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04340.1 HR-like lesion-inducing protein-related1.7e-0961.82Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNN---NGGPAAVELSSKVAVLRRNLSSKLGL
        MGFFS LGR+LFAS FILSA QMFN+   +GGPAA EL+ K+ + + +LSS LG+
Subjt:  MGFFSALGRLLFASFFILSACQMFNN---NGGPAAVELSSKVAVLRRNLSSKLGL
AT5G43460.1 HR-like lesion-inducing protein-related2.0e-1065.38Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVAVLRRNLSSKLGL
        MGFFS LGR+LFAS FILSA QMF N+GGPAA EL+ K+ +++ +LSS+LG+
Subjt:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVAVLRRNLSSKLGL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTTCTCCGCCCTTGGACGCCTCCTCTTTGCCTCCTTCTTCATCCTCTCTGCTTGTCAGATGTTTAACAATAATGGTGGGCCAGCAGCTGTGGAATTGTCTTC
AAAGGTAGCTGTTCTGAGGAGAAATTTATCATCCAAGTTGGGGTTGCTATACCTGATATTGATGTCAGACATGTGGTTGGTCTTTCATTATCTCTCAAAGGGATTGGAGC
TCTTCTATTTGTTTTGGGCTCAAGAGTTGGAGCTTATCTTTTGCTTCTTTACTTGGCTATTATCACTCCGGTTCTTTTCGATTTCTTCAACCTTAGTCTACTGA
mRNA sequenceShow/hide mRNA sequence
CAGCCGACTAAAAAGATATAGACTCGAGGATTTAGAGATTTTTTTAGAAAAATAAATTTGATTTGATGGTTTGAAATTTGAAATTTTGGGAAGTGGTGTGACACTCCAAA
TTCCTTTTTGTAGGTCCTCATTTATAACTGTGTTTTGCCATCAATTTTTTTTGCCTCTAAGAGTTGCGAGCCAGATTACCTTTGTCCATTTTCAAATATGGGATTCTTCT
CCGCCCTTGGACGCCTCCTCTTTGCCTCCTTCTTCATCCTCTCTGCTTGTCAGATGTTTAACAATAATGGTGGGCCAGCAGCTGTGGAATTGTCTTCAAAGGTAGCTGTT
CTGAGGAGAAATTTATCATCCAAGTTGGGGTTGCTATACCTGATATTGATGTCAGACATGTGGTTGGTCTTTCATTATCTCTCAAAGGGATTGGAGCTCTTCTATTTGTT
TTGGGCTCAAGAGTTGGAGCTTATCTTTTGCTTCTTTACTTGGCTATTATCACTCCGGTTCTTTTCGATTTCTTCAACCTTAGTCTACTGAAACCTACTTTTGGTATCAT
GTTAAGTGATTTCTTAGAGCACATTGCACTTTTTGGTGCTCTCCTTTTCTTCATAGGGATGAAGGGCACAAGTCCAAAGAAGCACTCAAAAAAGAAGACCCAAAAACAAA
AAGCAAAAGCAAAAGCACATTAGATTTGTCAAAAGCAAAGATTGGCCATTGGATTGGATTAATTTGCTGTCATTCAGTTCTTAGATTTACACACATTTTCACCATTGATG
CAAAAGTTTTGTTTTTGATTTTTTGGATATATGTTTTGTTTTTCATTGATGCCAAATAGCTTGAATGAGTAGTTATGTTCAATTTGAGCGGCATTAAGGACTTTGTACTT
CTAGCTAAGTTTTGTTATGGCATTGTCTTTATTCTTCTTAATTGAAAATCAAATCTGATTTAGCATTTGTGGTGTTTTATTGCTTCCTTAGCAAATTTAACCTAACCTCT
CTTGACTTAGTTTTCCTTTTATAGCTATTTTGTTCTTTTTATTTTTTAAAATTAAAATTAAGTCAATAAATACTACTTTTCACCCTA
Protein sequenceShow/hide protein sequence
MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVAVLRRNLSSKLGLLYLILMSDMWLVFHYLSKGLELFYLFWAQELELIFCFFTWLLSLRFFSISSTLVY