CuGenDBv2

Gene ID	CsGy3G012830
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	vegetative cell wall protein gp1
Genome location	Gy14Chr3:9621276..9622016
RNA-Seq Expression	CsGy3G012830
Synteny	CsGy3G012830
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597407.1 hypothetical protein SDJN03_10587, partial [Cucurbita argyrosperma subsp. sororia]

6.55e-56

66.3

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Query:  MSYASLFSFTLIRKTLPSYYPSSS--NFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE
        MS  S FSFTLIRKTLP YY SSS  N  I  FL SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP +TP 
Subjt:  MSYASLFSFTLIRKTLPSYYPSSS--NFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE

Query:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        P+FP    P+PPGP+ P PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEILTS S P
Subjt:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

KGN56930.1 hypothetical protein Csa_011403 [Cucumis sativus]

4.86e-120

97.89

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Query:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMSY SLFSFTLIRKTLPSYYP SSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFP+IRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
        PEPEFPP PPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
Subjt:  PEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

TYK17238.1 hypothetical protein E5676_scaffold434G00890 [Cucumis melo var. makuwa]

4.97e-97

84.82

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Query:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS  SLFSFTLI KTLPSYYPSSSNF + P LFSHSQFL FNEY  SLS S+LSGDSPEFPK RPVPPPS PLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPEFP-PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
        PEP+FP P PPGPEFPKPP PSPPGIDVP+PPR+PP+IEPPWPGSPVP PEILPPSPPEE+PPRPP PPRPFGPEILTS SP  FV  TYI
Subjt:  PEPEFP-PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

XP_022949559.1 vegetative cell wall protein gp1 [Cucurbita moschata]

5.32e-55

65.03

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Query:  MSYASLFSFTLIRKTLPSYYPSSSNF-AINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEP
        MS  S FSFTLIRKTLP YY SSS+   + P   SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSYASLFSFTLIRKTLPSYYPSSSNF-AINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  EFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        +FP    P+PPGP+ P PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEILTS S P
Subjt:  EFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

XP_022975412.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]

1.62e-56

66.85

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Query:  MSYASLFSFTLIRKTLPSYYPSSS--NFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE
        MS  S FSFTLIRKTLP YY SSS  N  I  FL SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP ITP 
Subjt:  MSYASLFSFTLIRKTLPSYYPSSS--NFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE

Query:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        P+FP    P+PPGP+FP PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEI TS S P
Subjt:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4M0 Uncharacterized protein

2.35e-120

97.89

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Query:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMSY SLFSFTLIRKTLPSYYP SSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFP+IRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
        PEPEFPP PPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
Subjt:  PEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

A0A2P6QPT4 Uncharacterized protein

2.27e-10

38.66

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Query:  MSYASLFSFTLIRKTLP--SYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPV---PP------PSFPLEIPQFSPPPEID--PS
        MS  S  SFTLI++T+P  S   +S++ +  P L S    + F   P  L  + LSG   E+P   P    PP      PS P E+P  S  PE+D   +
Subjt:  MSYASLFSFTLIRKTLP--SYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPV---PP------PSFPLEIPQFSPPPEID--PS

Query:  TPSELPSITPEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPP---EIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        TP   P ++P P  PP+ PGP          PG D P+PP KPP   ++  P+P +P+P P+ LPP PP+ VPP PP      GPEI+   +PP
Subjt:  TPSELPSITPEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPP---EIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

A0A5D3D162 Uncharacterized protein

2.41e-97

84.82

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Query:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS  SLFSFTLI KTLPSYYPSSSNF + P LFSHSQFL FNEY  SLS S+LSGDSPEFPK RPVPPPS PLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPEFP-PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
        PEP+FP P PPGPEFPKPP PSPPGIDVP+PPR+PP+IEPPWPGSPVP PEILPPSPPEE+PPRPP PPRPFGPEILTS SP  FV  TYI
Subjt:  PEPEFP-PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

A0A6J1GD64 vegetative cell wall protein gp1

2.58e-55

65.03

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Query:  MSYASLFSFTLIRKTLPSYYPSSSNF-AINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEP
        MS  S FSFTLIRKTLP YY SSS+   + P   SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSYASLFSFTLIRKTLPSYYPSSSNF-AINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  EFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        +FP    P+PPGP+ P PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEILTS S P
Subjt:  EFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

A0A6J1IL49 leucine-rich repeat extensin-like protein 3

7.84e-57

66.85

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Query:  MSYASLFSFTLIRKTLPSYYPSSS--NFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE
        MS  S FSFTLIRKTLP YY SSS  N  I  FL SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP ITP 
Subjt:  MSYASLFSFTLIRKTLPSYYPSSS--NFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE

Query:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        P+FP    P+PPGP+FP PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEI TS S P
Subjt:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G13340.1 Leucine-rich repeat (LRR) family protein

3.8e-04

42.06

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Query:  SPEFPKIRPVPPPSFPL---EIPQFSPPPEI-DPSTPSELPSITPEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSP
        SP  P + P+PPPS P      P FS PP +  P  PS  P +   P  PP PP    P PP P PP   V  PP  PP   PP P    P P   PP P
Subjt:  SPEFPKIRPVPPPSFPL---EIPQFSPPPEI-DPSTPSELPSITPEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSP

Query:  PEEVPPRPPSPPRPFGPEILTSASPP
        P   PP PP PP P  P + +   PP
Subjt:  PEEVPPRPPSPPRPFGPEILTSASPP

AT5G43770.1 proline-rich family protein

3.4e-05

45.24

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Query:  GDSP---EFPKIRPVPPPSFPLEIPQFSPPPEIDPS-TPSELPSI--TPEPEFPPMPPGPEFPKPPLPSPPGIDVPLP--PRKPPEIEPPWPGSPVPEPE
        G SP   E P      P   PLE+P+    PEI PS TP E+ ++   P P  PP  PGPEFP PP PSPP  D P P  P+ PP++ PP    P P P+
Subjt:  GDSP---EFPKIRPVPPPSFPLEIPQFSPPPEIDPS-TPSELPSI--TPEPEFPPMPPGPEFPKPPLPSPPGIDVPLP--PRKPPEIEPPWPGSPVPEPE

Query:  ILPPSPPEEVPPRPPSPPRPFGPEIL
        I PP    E PP    PP P GP I+
Subjt:  ILPPSPPEEVPPRPPSPPRPFGPEIL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGTAAGAATGTCCTATGCTTCCCTCTTCTCTTTCACTCTCATCAGAAAAACGCTTCCTAGTTATTACCCTTCTTCTTCCAATTTCGCGATCAACCCTTTCCTCTT
TTCTCATTCCCAATTCCTCCCCTTCAATGAGTACCCCGCGTCTCTCTCGCTTTCTCTGCTTTCGGGTGACTCGCCGGAGTTTCCCAAAATCCGCCCCGTTCCACCGCCTT
CTTTTCCCCTCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCGAGCACTCCGTCGGAGCTTCCATCGATAACTCCGGAACCGGAATTTCCTCCCATGCCACCA
GGACCAGAGTTTCCGAAGCCTCCGTTGCCGTCTCCTCCGGGAATCGATGTACCGCTACCACCCCGTAAGCCTCCAGAAATAGAGCCACCGTGGCCTGGTTCGCCAGTACC
AGAACCAGAGATTTTGCCGCCGTCACCACCGGAGGAGGTGCCACCTAGACCTCCTAGTCCACCTAGACCTTTTGGTCCAGAGATATTGACGTCGGCGTCTCCACCTGGTT
TTGTTGCTCTGACGTACATTTAA

mRNA sequence

Show/hide mRNA sequence

TTCCACAGGAAGAACTGCCATGGCCGTAAGAATGTCCTATGCTTCCCTCTTCTCTTTCACTCTCATCAGAAAAACGCTTCCTAGTTATTACCCTTCTTCTTCCAATTTCG
CGATCAACCCTTTCCTCTTTTCTCATTCCCAATTCCTCCCCTTCAATGAGTACCCCGCGTCTCTCTCGCTTTCTCTGCTTTCGGGTGACTCGCCGGAGTTTCCCAAAATC
CGCCCCGTTCCACCGCCTTCTTTTCCCCTCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCGAGCACTCCGTCGGAGCTTCCATCGATAACTCCGGAACCGGA
ATTTCCTCCCATGCCACCAGGACCAGAGTTTCCGAAGCCTCCGTTGCCGTCTCCTCCGGGAATCGATGTACCGCTACCACCCCGTAAGCCTCCAGAAATAGAGCCACCGT
GGCCTGGTTCGCCAGTACCAGAACCAGAGATTTTGCCGCCGTCACCACCGGAGGAGGTGCCACCTAGACCTCCTAGTCCACCTAGACCTTTTGGTCCAGAGATATTGACG
TCGGCGTCTCCACCTGGTTTTGTTGCTCTGACGTACATTTAATGTGTACTACTTTAGTTGAATTTCATGTTTCAATCTAATTCAATTTTGTGTTGGTACTACCATGTACT
AGTAGTTTATGTCTCCGTATAAACTTTTCTATGTATATGAGAATCCGTTGCCAATTTTACCCTCAAAGGTGCTTATGGCTC

Protein sequence

Show/hide protein sequence

MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPEFPPMPP
GPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

CsGy3G012830 (gene) of Cucumber (Gy14) v2.1 genome