; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G014360 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G014360
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationGy14Chr3:10635482..10636861
RNA-Seq ExpressionCsGy3G014360
SyntenyCsGy3G014360
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]1.96e-8399.26Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKV
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKV
XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]3.13e-8279.33Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEIPLLQALYNLMSVASIFPYVEIAHCRLLRTPSVALGENPKRS
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQK+                    VE + C + + P      NPKRS
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEIPLLQALYNLMSVASIFPYVEIAHCRLLRTPSVALGENPKRS
XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]3.87e-6888.24Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKNKKNKRQK
        EASFD+GE+MNSEPKKQK KNKK KKNKNKK K+ K
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKNKKNKRQK
XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]1.31e-6887.86Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKNKK---NKRQKV
        EASFD+GE+MNSEPKKQK KNKK KKNKNKK   NKRQK+
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKNKK---NKRQKV
XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]9.63e-117100Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEIPLLQALYNLMSVASIFPYVEIAHCRLLRTPSVALGENPKRS
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEIPLLQALYNLMSVASIFPYVEIAHCRLLRTPSVALGENPKRS
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEIPLLQALYNLMSVASIFPYVEIAHCRLLRTPSVALGENPKRS
TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein9.48e-8499.26Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKV
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKV
A0A1S3AY37 uncharacterized protein LOC1034838321.52e-8279.33Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEIPLLQALYNLMSVASIFPYVEIAHCRLLRTPSVALGENPKRS
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQK+                    VE + C + + P      NPKRS
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEIPLLQALYNLMSVASIFPYVEIAHCRLLRTPSVALGENPKRS
A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X11.87e-6888.24Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKNKKNKRQK
        EASFD+GE+MNSEPKKQK KNKK KKNKNKK K+ K
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKNKKNKRQK
A0A6J1GY51 uncharacterized protein LOC111457905 isoform X26.34e-6987.86Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKNKK---NKRQKV
        EASFD+GE+MNSEPKKQK KNKK KKNKNKK   NKRQK+
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKNKK---NKRQKV
A0A6J1IUT6 uncharacterized protein LOC1114794943.31e-6889.05Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE

Query:  ASFDEGESMNSEPKKQKKKNKK-KKNKN-KKNKRQKV
        ASFD+GE+MNSEPKKQK KNKK KKNK  KKNKRQK+
Subjt:  ASFDEGESMNSEPKKQKKKNKK-KKNKN-KKNKRQKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein2.6e-3161.87Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN L+SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFDEGESMNSE-PKKQKKKNKKKKNKNKKNKRQK
        +D E S D+ +  N++  KK+KKKN KKK + KK K+ K
Subjt:  DDPEASFDEGESMNSE-PKKQKKKNKKKKNKNKKNKRQK
AT5G18540.2 unknown protein1.5e-3158.62Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN L+SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFD----EGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEI
        +D E S D    E   +N + KK+  K KK++ K KKNK+ K+ +
Subjt:  DDPEASFD----EGESMNSEPKKQKKKNKKKKNKNKKNKRQKVEI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGAGCTTTACGCGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCA
TCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGAACCAAGATCCTAATGCTCTCTCTTCTATTAATCCTCAGATTTTGG
ACCTTGCTGTTCGTAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATCCGGCATGTGGACACATTTGATGACCCTGAGGCTTCTTTTGATGAAGGGGAATCCATG
AATTCTGAGCCTAAGAAACAAAAGAAGAAGAACAAGAAGAAGAAAAATAAGAATAAGAAGAATAAAAGGCAAAAGGTTGAAATCCCCCTTCTTCAAGCTCTATATAATCT
GATGAGTGTTGCCTCTATTTTTCCTTATGTTGAGATTGCACACTGCAGATTGTTGAGGACTCCGAGTGTGGCGTTGGGGGAAAACCCAAAAAGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
CGGGACGACAAAACGACTTTGCTTTCTCATCCCCCAAAGAGAAGAAAGGAAGCGACGGGCGATGTCGTGAGATCTGCACAAAGCAAAAAGGGAACAGAATTCAAATTTCT
GAAAGAATTTGGAAAAAACAAAAAAACAAAAAATAGAGAAAATCCATAGCCAATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGAGCTTTACGCGGAAGCAAGTTCG
CTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCATCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGG
AAATTGAACCAAGATCCTAATGCTCTCTCTTCTATTAATCCTCAGATTTTGGACCTTGCTGTTCGTAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATCCGGCA
TGTGGACACATTTGATGACCCTGAGGCTTCTTTTGATGAAGGGGAATCCATGAATTCTGAGCCTAAGAAACAAAAGAAGAAGAACAAGAAGAAGAAAAATAAGAATAAGA
AGAATAAAAGGCAAAAGGTTGAAATCCCCCTTCTTCAAGCTCTATATAATCTGATGAGTGTTGCCTCTATTTTTCCTTATGTTGAGATTGCACACTGCAGATTGTTGAGG
ACTCCGAGTGTGGCGTTGGGGGAAAACCCAAAAAGAAGTTGAGATTGTGAGCTTAAAGGGAAGGAAACACAACTGGAGATATTCAGTTTTCAGAAGATTGGAGAATTAAC
TTGAAAGGATGAACCTTTTTGGAAGCAAGGCAGTTAGTAAGCCCTACAGGGTTGCTGTTCCTGATGTTTTTGAGCAACGAGAACTATAAAGTCTCATCATATTCACGAGT
CTAAAACAATTTGATTTCTCTAGTGAAAGAATGATGTTTAGCTTCTCTTACTCATGTTGCAGCATTCTTTTAGTTTGTTGGCAAATTGCAACTTTTTTTAAATCCAATGA
CCTGAATTCCATTGTTTGTATGAGAAATCTTTTCCATCATTTAAATGCCAC
Protein sequenceShow/hide protein sequence
MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDPEASFDEGESM
NSEPKKQKKKNKKKKNKNKKNKRQKVEIPLLQALYNLMSVASIFPYVEIAHCRLLRTPSVALGENPKRS