; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G014580 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G014580
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionIsoleucyl-tRNA synthetase
Genome locationGy14Chr3:10758932..10759528
RNA-Seq ExpressionCsGy3G014580
SyntenyCsGy3G014580
Gene Ontology termsGO:0006428 - isoleucyl-tRNA aminoacylation (biological process)
GO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
GO:0004822 - isoleucine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002300 - Aminoacyl-tRNA synthetase, class Ia
IPR009008 - Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650396.1 hypothetical protein Csa_009563 [Cucumis sativus]1.37e-7098.04Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAGELLFYYNGSNMVVDLFPYV
        MAIQGYIFRGRKPVHWSPSSRTALAEA LEYPEGHTSRSIYAIFRLVKEGPSSGGVLQ+FFRDLCLAIWTTTPWTIPANAGELLFYYNGSNMVVDLFPYV
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAGELLFYYNGSNMVVDLFPYV

Query:  SK
        SK
Subjt:  SK

TYK16176.1 isoleucine--tRNA ligase [Cucumis melo var. makuwa]1.84e-4695.06Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG
        MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQ+F  DLCLAIWTTTPWTIPANA 
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG

XP_008438885.1 PREDICTED: isoleucine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo]3.10e-4595.06Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG
        MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQ+F  DLCLAIWTTTPWTIPANA 
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG

XP_011651056.2 isoleucine--tRNA ligase, chloroplastic/mitochondrial [Cucumis sativus]3.10e-4595.06Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG
        MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQ+F  DLCLAIWTTTPWTIPANA 
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG

XP_031738275.1 uncharacterized protein LOC105434843 isoform X4 [Cucumis sativus]8.39e-5394.12Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAGELLF
        MAIQGYIFRGRKPVHWSPSSRTALAEA LEYPEGHTSRSIYAIFRLVKEGPSSGGVLQ+FFRDLCLAIWTTTPWTIPANA  L F
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAGELLF

TrEMBL top hitse value%identityAlignment
A0A1S3AY52 Isoleucyl-tRNA synthetase1.50e-4595.06Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG
        MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQ+F  DLCLAIWTTTPWTIPANA 
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG

A0A5A7U5N1 Isoleucyl-tRNA synthetase1.51e-4595.06Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG
        MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQ+F  DLCLAIWTTTPWTIPANA 
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG

A0A5D3D0J5 Isoleucyl-tRNA synthetase8.93e-4795.06Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG
        MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQ+F  DLCLAIWTTTPWTIPANA 
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG

A0A6J1GYE1 Isoleucyl-tRNA synthetase3.82e-4593.83Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG
        MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGG+LQ+F  DLCLAIWTTTPWTIPANA 
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG

A0A6J1IX89 Isoleucyl-tRNA synthetase3.82e-4593.83Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG
        MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGG+LQ+F  DLCLAIWTTTPWTIPANA 
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAG

SwissProt top hitse value%identityAlignment
B1WVA3 Isoleucine--tRNA ligase4.8e-2767.09Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN
        MA++GYI+RG KPVHWSPSS+TALAEAELEYPEGHTSRSI+A F ++K    +  +LQ F   L +AIWTTTPWT+P N
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN

B7K5H5 Isoleucine--tRNA ligase1.1e-2665.82Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN
        MA++GYI+RG KPVHWSPSSRTALAEAELEYPEGHTS+SI+A F ++K    +  +L  F  +L +AIWTTTPWT+P N
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN

B7KFT1 Isoleucine--tRNA ligase9.7e-2867.09Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN
        MA++GYI+RG KPVHWSPSS+TALAEAELEYPEGHTSRS+YA+F + K   ++  VL  + +DL +AIWTTTPWT+P N
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN

P73505 Isoleucine--tRNA ligase2.2e-2767.09Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN
        MA++GYI+RG KPVHWSPSSRTALAEAELEYPEGHTSRSIY  F + + G  +  +L  +  DL +AIWTTTPWT+P N
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN

Q8RXK8 Isoleucine--tRNA ligase, chloroplastic/mitochondrial2.0e-2871.25Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA
        MA++GYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAIF+LV  G +   +L +F  ++ LA+WTTTPWT+PANA
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA

Arabidopsis top hitse value%identityAlignment
AT5G49030.1 tRNA synthetase class I (I, L, M and V) family protein1.4e-2971.25Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA
        MA++GYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAIF+LV  G +   +L +F  ++ LA+WTTTPWT+PANA
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA

AT5G49030.2 tRNA synthetase class I (I, L, M and V) family protein1.4e-2971.25Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA
        MA++GYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAIF+LV  G +   +L +F  ++ LA+WTTTPWT+PANA
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA

AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein1.4e-2971.25Show/hide
Query:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA
        MA++GYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAIF+LV  G +   +L +F  ++ LA+WTTTPWT+PANA
Subjt:  MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCCAAGGTTATATATTTAGAGGGAGAAAGCCAGTTCACTGGAGTCCCTCATCACGAACTGCTCTTGCAGAGGCTGAATTGGAGTACCCTGAGGGGCATACTTC
AAGAAGCATATACGCCATTTTTAGATTGGTTAAGGAAGGTCCATCTTCAGGCGGTGTGCTACAAGATTTTTTCCGAGACTTGTGCTTGGCCATATGGACTACAACTCCTT
GGACTATTCCAGCCAATGCTGGTGAGCTTTTGTTCTATTACAATGGGAGCAATATGGTTGTAGATTTATTTCCGTATGTTTCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCCAAGGTTATATATTTAGAGGGAGAAAGCCAGTTCACTGGAGTCCCTCATCACGAACTGCTCTTGCAGAGGCTGAATTGGAGTACCCTGAGGGGCATACTTC
AAGAAGCATATACGCCATTTTTAGATTGGTTAAGGAAGGTCCATCTTCAGGCGGTGTGCTACAAGATTTTTTCCGAGACTTGTGCTTGGCCATATGGACTACAACTCCTT
GGACTATTCCAGCCAATGCTGGTGAGCTTTTGTTCTATTACAATGGGAGCAATATGGTTGTAGATTTATTTCCGTATGTTTCCAAGTAA
Protein sequenceShow/hide protein sequence
MAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANAGELLFYYNGSNMVVDLFPYVSK