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CsGy3G014910 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G014910
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionleucine-rich repeat extensin-like protein 6
Genome locationGy14Chr3:10966167..10967082
RNA-Seq ExpressionCsGy3G014910
SyntenyCsGy3G014910
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049526.1 Nutrient reservoir [Cucumis melo var. makuwa]2.03e-2985.71Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
        ME PI LQ LISLT LLLL     SSLPVFHPRSSAGAKYQIECTMCSACDNPC QYLSPPPPPPSPPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
KGN57146.1 hypothetical protein Csa_010613 [Cucumis sativus]8.20e-39100Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
        METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
XP_022955565.1 leucine-rich repeat extensin-like protein 6 [Cucurbita moschata]1.14e-2578.26Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPP
        MET I L+F ISLTA+LL FP+G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSPPPPPPSPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPP
XP_023526139.1 leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]9.10e-2576.81Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPP
        MET I L+  ISLTA+LL FP+G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSPPPPPPSPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPP
XP_038906774.1 leucine-rich repeat extensin-like protein 6 [Benincasa hispida]5.11e-2678.38Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPS---PPPPS
        MET I L+F ISLTA+LLLFP+G SSLPV   R SAGAKYQIECTMCSACDNPC QYLSPPPPPP    PPPPS
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPS---PPPPS
TrEMBL top hitse value%identityAlignment
A0A0A0LAN7 Nutrient reservoir3.97e-39100Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
        METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
A0A5A7U5R9 Nutrient reservoir9.83e-3085.71Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
        ME PI LQ LISLT LLLL     SSLPVFHPRSSAGAKYQIECTMCSACDNPC QYLSPPPPPPSPPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
A0A6J1C7N8 leucine-rich repeat extensin-like protein 32.30e-2269.86Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGA---KYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
        ME   PL+FL+ L A+LL+FP+ + SLP    R+SAGA   KYQIECTMCSACDNPC QYLSPPPPPPSPPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGA---KYQIECTMCSACDNPCAQYLSPPPPPPSPPPP
A0A6J1GVF6 leucine-rich repeat extensin-like protein 65.50e-2678.26Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPP
        MET I L+F ISLTA+LL FP+G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSPPPPPPSPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPP
A0A6J1IXZ9 leucine-rich repeat extensin-like protein 68.81e-2576.81Show/hide
Query:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPP
        MET I L+F ISLTA+LL F +G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSPPPPPPSPPP
Subjt:  METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16140.1 proline-rich family protein9.7e-0652.73Show/hide
Query:  ECTMCSACDNPCAQYLSPPPPP--PSPPPPSTVRPRLLLPAPAPTTTTLPPTSST
        +CTMC++CDNPC    SPPPPP  PSPPPPS            PTTT  PP  S+
Subjt:  ECTMCSACDNPCAQYLSPPPPP--PSPPPPSTVRPRLLLPAPAPTTTTLPPTSST
AT5G49280.1 hydroxyproline-rich glycoprotein family protein3.7e-0553.85Show/hide
Query:  IECTMCSACDNPCAQYLSPPPPPPSPPPPSTVRPRLLLPAPAPTTTTLPPTS
        + CTMCS+CDNPC+   S  PPPPSPPPPST           PTT   PP S
Subjt:  IECTMCSACDNPCAQYLSPPPPPPSPPPPSTVRPRLLLPAPAPTTTTLPPTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCCCATTCCTCTCCAATTTCTCATCTCTCTCACCGCGCTTCTCCTCCTTTTTCCCTCCGGAATTTCATCTCTTCCGGTCTTCCACCCCCGCTCCTCCGCCGG
TGCTAAGTACCAAATTGAATGCACAATGTGCTCTGCTTGTGACAATCCTTGCGCTCAGTATCTATCTCCCCCACCTCCTCCACCGTCTCCTCCTCCCCCGTCAACTGTCC
GCCCCCGCCTTCTCCTCCCAGCTCCGGCACCTACGACTACTACTCTCCCCCCCACCAGCTCAACCCTCTTACACATACTCCTCCCCGCCGCCGCCGGGTGGAATCATCGG
ACCCGGGGGGTACTACCAGCCCCCGCCGTATAG
mRNA sequenceShow/hide mRNA sequence
CTTCACTTCACTAATCTCCTTTGTAATTCCATTTCCCACCCTCTCTCTTCCCCCCACAATGGAAACTCCCATTCCTCTCCAATTTCTCATCTCTCTCACCGCGCTTCTCC
TCCTTTTTCCCTCCGGAATTTCATCTCTTCCGGTCTTCCACCCCCGCTCCTCCGCCGGTGCTAAGTACCAAATTGAATGCACAATGTGCTCTGCTTGTGACAATCCTTGC
GCTCAGTATCTATCTCCCCCACCTCCTCCACCGTCTCCTCCTCCCCCGTCAACTGTCCGCCCCCGCCTTCTCCTCCCAGCTCCGGCACCTACGACTACTACTCTCCCCCC
CACCAGCTCAACCCTCTTACACATACTCCTCCCCGCCGCCGCCGGGTGGAATCATCGGACCCGGGGGGTACTACCAGCCCCCGCCGTATAGTAATTACCCAGCTCCCCCG
CCTCCCAATCCCATTGTCCCATACTTCCCATTTTTTTACCATACTCCACCGCCGGGCTCTTCCGCCGCCGTCCCCCGTTTGACGAATTCCTTGCCTTGCTCTGTTCTTAC
CGTTGCCCTGTTTTCCTTTTTACTTGCTTTGTTTTAAATGCAAATAACAGCAGACAGAAACTTGCAATAATGGCGGATTTTGCAGATCTGGGAAATTGATGGAGCTAAAT
GAGAAAGAGAAATTGAGAAAAAAGAAAAAGGGTTTCGATCTTCGAAGAAGACGATGAGAAATTCACTTCAAGAATTTGCATTCTGTTGGGGTAAAGAAATTTTCTTTCTC
ATCCGGAAATTTCCTCTGAATCTCTTTCTTTTTACTTGACTCCATTGTTATTAGATTGATTTGTAATCTGCTGATTATATATAAATTGTATGTGTTTTTACTTGTATTCT
TAACTCAATTCCTCAAAAAGCAAATCTGTATGTATC
Protein sequenceShow/hide protein sequence
METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPPSTVRPRLLLPAPAPTTTTLPPTSSTLLHILLPAAAGWNHR
TRGVLPAPAV