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CsGy3G016890 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G016890
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
Genome locationGy14Chr3:12987196..12988992
RNA-Seq ExpressionCsGy3G016890
SyntenyCsGy3G016890
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140781.1 uncharacterized protein LOC101217506 [Cucumis sativus]2.28e-63100Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
XP_008439192.1 PREDICTED: uncharacterized protein LOC103484063 [Cucumis melo]2.81e-5792.86Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQFTQTGP WTNEKHMHFLNS+EASFVRSMFQNRAHRR LRLDRLLPDTADSTLDSP NHTKNHPTSGSAR+NGRSTRRSRR SSPPY+STQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
XP_023552558.1 uncharacterized protein LOC111810184 isoform X1 [Cucurbita pepo subsp. pepo]2.11e-4073.47Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRR LRLDR L DTADSTLDSPH + K H  S   R++GRS+RRSRRI S P+TS QDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
XP_038882732.1 uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida]1.45e-4379Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRGLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++TGP WTNEKHMHFLNS+EASFV+SMF+NR H RR LRLDR LPDTADSTLDSP  + TKNH TS + RINGRS+RRSRRISS P+TSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRGLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
XP_038882735.1 uncharacterized protein LOC120073889 isoform X2 [Benincasa hispida]4.66e-4279Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRGLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++TGP WTNEKHMHFLNS+EASFV+SMF+NR H RR LRLDR LPDTADSTLDSP  + TKNH TS   RINGRS+RRSRRISS P+TSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRGLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
TrEMBL top hitse value%identityAlignment
A0A0A0L5V0 Uncharacterized protein1.11e-63100Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
A0A1S3AYV4 uncharacterized protein LOC1034840631.36e-5792.86Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQFTQTGP WTNEKHMHFLNS+EASFVRSMFQNRAHRR LRLDRLLPDTADSTLDSP NHTKNHPTSGSAR+NGRSTRRSRR SSPPY+STQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
A0A6J1CHV7 uncharacterized protein LOC1110116409.43e-4073.74Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRG-LRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF +TG  WTNEKHMHFLNS+EASFVRSMF+NR HRR  LRLDR LPDT+DSTLDSP    KNH TSG+A I+GRS+ RSR  SS P+TS QDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRG-LRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
A0A6J1J606 uncharacterized protein LOC111482903 isoform X21.63e-3973.47Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRR LRLDR L DTADSTLDSP  + K H  SG+ R++GRS+RRSRRI S P+TS QDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X18.33e-4072.45Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRR LRLDR L DTADSTLDSP  + K H  S   R++GRS+RRSRRI S P+TS QDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCGCATGTGCAATTCACCCAAACCGGGCCGCTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCGTGGAAGCTTCTTTCGTCCGATCAATGTTCCAAAA
TCGCGCACATCGCCGCGGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACCAAAAACCATCCCACCTCCGGAAGTG
CAAGAATCAACGGTAGATCTACGAGGAGATCTAGGAGGATATCATCTCCACCGTACACTTCAACTCAAGATCAGGCTAGTGCAGAAACTATATACTATAAATTTAAACAT
TACATTTCTTTCTTTCTTTTATCTCTACTAATAATAGAAATGACCTATTTGTTTTTGTCTTTATCTCCTTCTTTTTCCATCGAAATAATTATGCTGCCTTTTTTTTTTTG
CGGCTGGTGTGGGTATTTTGGAAATGCCACGTGGATATAG
mRNA sequenceShow/hide mRNA sequence
GGTTATAAAAAGTAGGTGAGGGAGAGAGGGAGAGAGGGTGAAAGGCGAGTAGGGGAAACACATGATTTTAATGTGTAGTCGCGTTTCAGAATTGGGAAAAAGGAAACGCC
AAAGTCGCCAACCCTATAGCTTCTCTTCTTTCTTTGTAAAAGCGCTTCTATAAAAACCAACGTAATTAAAACCCCACCAATCCAGTACATTATATTCATATCTCCCAAAC
CCATCGGAAAAGTGTTTTTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTATTTCTTCTTCTTTCAATTCCTCTCCCTTCAATTTTATGTTCTCATACACACCTAATT
ATTAAACCCATGGAATCGCATGTGCAATTCACCCAAACCGGGCCGCTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCGTGGAAGCTTCTTTCGTCCGATCAAT
GTTCCAAAATCGCGCACATCGCCGCGGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACCAAAAACCATCCCACCT
CCGGAAGTGCAAGAATCAACGGTAGATCTACGAGGAGATCTAGGAGGATATCATCTCCACCGTACACTTCAACTCAAGATCAGGCTAGTGCAGAAACTATATACTATAAA
TTTAAACATTACATTTCTTTCTTTCTTTTATCTCTACTAATAATAGAAATGACCTATTTGTTTTTGTCTTTATCTCCTTCTTTTTCCATCGAAATAATTATGCTGCCTTT
TTTTTTTTGCGGCTGGTGTGGGTATTTTGGAAATGCCACGTGGATATAGATTATAAAATTAAGAAAAAAGTGATCATATCCGTAATTAAAGCATATAGCTTTGTGCTCCC
ACATCTAATTGGCTAAACTCTAATTATTAATTTTTTAGTAGTAAAATTGATAATAGAAAAGAGAAGAGAAGAAACTAAAAATATCTGGTTCAATTATTAAACAAAGCTCA
GGAATGATGGTTATCTTGTAAAATACACAAAAAGAAGTTATAAAAAATGGTATTAATGAATGAATGAATTATAGAATTGAAATAAAAATGTGGAATGGTTTTGTGTGAAA
TGACAGGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTCTCAACTAGCAAATATATTCTTCTTCTTCTTCTTCTTT
TAATCTTTATATCTTTTCATTTTAGTTTTTAGATCTTTAATTAATTATTGTCTGAACAAACAAACAAACACAAAGATGGGTCTAATTCAGAAATTAAGTGAATTTCAATT
GGCTTACTTCATGTTCAATTTACAAGTCATATTTTACGTATGACATCATGAGGTTGAATTAATTACCATTCACCTTCAGTACTGCTTTACACATATTTTATTTTACTTGT
GTTAATTACATGATTTATATT
Protein sequenceShow/hide protein sequence
MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQASAETIYYKFKH
YISFFLLSLLIIEMTYLFLSLSPSFSIEIIMLPFFFCGWCGYFGNATWI