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CsGy3G018560 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G018560
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioncytochrome b-c1 complex subunit 6-like
Genome locationGy14Chr3:14719425..14722902
RNA-Seq ExpressionCsGy3G018560
SyntenyCsGy3G018560
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650514.1 hypothetical protein Csa_011326 [Cucumis sativus]2.56e-83100Show/hide
Query:  MGSSLTSIITWEQIVGLKAIAFPLVKIARFSIFQSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYF
        MGSSLTSIITWEQIVGLKAIAFPLVKIARFSIFQSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYF
Subjt:  MGSSLTSIITWEQIVGLKAIAFPLVKIARFSIFQSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYF

Query:  DYWSCIDKCVAPKLLTKLK
        DYWSCIDKCVAPKLLTKLK
Subjt:  DYWSCIDKCVAPKLLTKLK

KAG6576964.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.76e-5491.86Show/hide
Query:  QSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        Q FL  SF PSQY LLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  QSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

KAG6600342.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.06e-5390.7Show/hide
Query:  QSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        Q FLA SF PSQ  LLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKL TK+K
Subjt:  QSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

KAG7014985.1 hypothetical protein SDJN02_22616, partial [Cucurbita argyrosperma subsp. argyrosperma]5.80e-5488.89Show/hide
Query:  FSIFQSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        F   Q FL  SF PSQY LLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  FSIFQSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]6.42e-5390.7Show/hide
Query:  QSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        Q FLA SF PSQ  LLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKL TK+K
Subjt:  QSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

TrEMBL top hitse value%identityAlignment
A0A0A0L6I2 UCR_hinge domain-containing protein1.85e-6280.95Show/hide
Query:  MGSSLTSIITWEQIVGLKAIAFPLVKIARFSIFQSFLACSFPP-------SQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHK
        MGSSLTSIITWEQIVGLKAIAFPLVKIAR  I  S    S P          Y    +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHK
Subjt:  MGSSLTSIITWEQIVGLKAIAFPLVKIARFSIFQSFLACSFPP-------SQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHK

Query:  HCTGQYFDYWSCIDKCVAPKLLTKLK
        HCTGQYFDYWSCIDKCVAPKLLTKLK
Subjt:  HCTGQYFDYWSCIDKCVAPKLLTKLK

A0A1S3C350 Cytochrome b-c1 complex subunit 66.17e-4798.55Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like3.11e-5390.7Show/hide
Query:  QSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        Q FLA SF PSQ  LLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKL TK+K
Subjt:  QSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 61.77e-4695.65Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKL TK+K
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 62.51e-4697.1Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 68.1e-2672.46Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        M+DEE VD K  LE +CKPKCV+ L EYQAC KR++GD+SGHKHCTGQYFDYW CIDKCVA KL   LK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial3.1e-3388.41Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKL  KLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

Q1ZXP3 Probable cytochrome b-c1 complex subunit 61.4e-0641.38Show/hide
Query:  LEEACKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAPKLLTKLK
        ++E C   C K    YQAC  R+   +   K +C GQ+ ++  CIDKCV PKL  +LK
Subjt:  LEEACKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAPKLLTKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial3.3e-2781.97Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein2.2e-3488.41Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKL  KLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein1.6e-2967.82Show/hide
Query:  LVKIARFSIFQSFLACSFPPSQYSL-LAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC
        L+K+     F+S    S     + L   MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Subjt:  LVKIARFSIFQSFLACSFPPSQYSL-LAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein2.3e-2881.97Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein2.3e-2881.97Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCAAGTTTAACGAGTATTATTACGTGGGAACAAATCGTTGGATTGAAAGCAATTGCTTTCCCTTTGGTCAAAATTGCAAGGTTCTCCATATTTCAGAGTTTTCT
TGCGTGCTCTTTCCCTCCAAGTCAGTACTCTTTGTTAGCCATGGCGGATGAAGAGCCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAAC
CACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTT
GCACCAAAACTATTGACGAAACTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCAAGTTTAACGAGTATTATTACGTGGGAACAAATCGTTGGATTGAAAGCAATTGCTTTCCCTTTGGTCAAAATTGCAAGGTTCTCCATATTTCAGAGTTTTCT
TGCGTGCTCTTTCCCTCCAAGTCAGTACTCTTTGTTAGCCATGGCGGATGAAGAGCCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAAC
CACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTT
GCACCAAAACTATTGACGAAACTAAAGTAA
Protein sequenceShow/hide protein sequence
MGSSLTSIITWEQIVGLKAIAFPLVKIARFSIFQSFLACSFPPSQYSLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
APKLLTKLK