CuGenDBv2

Gene ID	CsGy3G019250
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transmembrane protein
Genome location	Gy14Chr3:15540079..15540513
RNA-Seq Expression	CsGy3G019250
Synteny	CsGy3G019250
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN57622.1 hypothetical protein Csa_011783 [Cucumis sativus]

2.11e-75

100

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL
        MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL

Query:  VYSWREKYD
        VYSWREKYD
Subjt:  VYSWREKYD

XP_008456033.1 PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]

1.89e-65

74.31

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA
        M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG                                   MA
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA

Query:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_011651290.1 uncharacterized protein LOC101222658 [Cucumis sativus]

6.89e-68

75.69

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA
        MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG                                   MA
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA

Query:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_023552109.1 uncharacterized protein LOC111809873 isoform X3 [Cucurbita pepo subsp. pepo]

1.65e-67

88.7

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Query:  TSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-------MAIWRVYFERKLEDLARDWPRQVVGDVTLAL
        +S GF LICMLHSLIALTCGALMMFYSHEV+VFGHGPETAIKLQGSSPHDQLLI+TSDSFSG       MAIWRVYFERKLEDLA+DWPRQVVGDVTLAL
Subjt:  TSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-------MAIWRVYFERKLEDLARDWPRQVVGDVTLAL

Query:  SWVFFLVYSWREKYD
        SWVFFLVYSWREKYD
Subjt:  SWVFFLVYSWREKYD

XP_038875201.1 uncharacterized protein LOC120067716 [Benincasa hispida]

1.56e-64

73.61

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA
        M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG                                   MA
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA

Query:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLA DWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAF1 Uncharacterized protein

1.02e-75

100

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL
        MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL

Query:  VYSWREKYD
        VYSWREKYD
Subjt:  VYSWREKYD

A0A1S3C293 uncharacterized protein LOC103496084

9.17e-66

74.31

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA
        M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG                                   MA
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA

Query:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1CPH9 uncharacterized protein LOC111012927

5.08e-63

71.53

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA
        M SSGF LICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSPHDQLLI+TSDSFSG                                   MA
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA

Query:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLARDWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1FMS5 uncharacterized protein LOC111446881

8.78e-64

72.22

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA
        M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSG                                   MA
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA

Query:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1J9R2 uncharacterized protein LOC111482570 isoform X2

9.07e-64

72.03

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Query:  TSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MAI
        +S GF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSFSG                                   MAI
Subjt:  TSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MAI

Query:  WRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  WRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G53035.1 unknown protein

4.5e-34

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA
        M  S F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+PHD+LLI+ S SFSG                                   MA
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA

Query:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        +WRV FE K+EDLA +WP+Q +GD+ LA+SWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

AT3G15358.1 unknown protein

5.5e-32

47.92

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Query:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA
        M S  F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+PHD+ LI+ S SFSG                                   MA
Subjt:  MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSG-----------------------------------MA

Query:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
        +WRV FE K+EDLA + P+Q +GD+ LA+SWVFFLVY+WREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

Sequences

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CDS sequence

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ATGACATCATCTGGGTTTTGCTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTTTATGTCTTTGGCCATGG
CCCTGAAACCGCAATCAAGCTGCAGGGATCTAGTCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTATGGCCATATGGAGAGTTTATTTCGAGAGGA
AGCTTGAGGATCTCGCCCGGGATTGGCCTCGACAGGTTGTTGGGGATGTTACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAAATACGATTAA

mRNA sequence

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Protein sequence

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MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD

CsGy3G019250 (gene) of Cucumber (Gy14) v2.1 genome