; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G020050 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G020050
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionMADS-box domain-containing protein
Genome locationGy14Chr3:16481700..16483518
RNA-Seq ExpressionCsGy3G020050
SyntenyCsGy3G020050
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033897 - MADS SRF-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650565.1 hypothetical protein Csa_011366 [Cucumis sativus]5.24e-14099.5Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL
        MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL

Query:  TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFEEYNVEGFQSLLEDKFLET
        TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFN+SDLFNEPDEFEEYNVEGFQSLLEDKFLET
Subjt:  TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFEEYNVEGFQSLLEDKFLET

Query:  L
        L
Subjt:  L

XP_004145650.1 agamous-like MADS-box protein AGL82 [Cucumis sativus]1.55e-14099.5Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL
        MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL

Query:  TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFEEYNVEGFQSLLEDKFLET
        TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFN+SDLFNEPDEFEEYNVEGFQSLLEDKFLET
Subjt:  TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFEEYNVEGFQSLLEDKFLET

Query:  L
        L
Subjt:  L

XP_023526169.1 agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo]5.39e-5660.73Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPN--SSYDLNRFFSDRKNK
        MGRG LSLKLI NPKSRRTTF KRKKSL+KKAYELSTLCDVQTC+ IASD      F+TWP + +Q+  MIRSYKS SF K +  SSYDLN+FFSDRKNK
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPN--SSYDLNRFFSDRKNK

Query:  ILTNTSKLLHNV-----------VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQT----EDEETTQFNISDL
        I+T TSKL   V           +D  SEHQL  LL  LDSKI VA+ MIEFMEADYD+LI+ A+ + +   QT    E E + + NIS+L
Subjt:  ILTNTSKLLHNV-----------VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQT----EDEETTQFNISDL

XP_038877825.1 agamous-like MADS-box protein MADS1 [Benincasa hispida]1.54e-9571.24Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKP---NSSYDLNRFFSDRKN
        MGRG LSLKLIPN KSRRTTF+KRKKSL+KKAYELSTLCDVQTC+FIASDCDPSTHFETWPPNH QI+ MIRSYKS SF K    NSSY+L +FFSDRKN
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKP---NSSYDLNRFFSDRKN

Query:  KILTNTSKLLHNVVDHQ----SEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFE-----------
        KILT+TSKL HNV DH     SEHQL ELL  LDSKI VA+ MI+FM+ADYDHLI+QA GMDT PS+TE E TT+ +IS+   EPDEFE           
Subjt:  KILTNTSKLLHNVVDHQ----SEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFE-----------

Query:  ---EYNVEGFQSLLEDKFLETLFLQS
           EYNVEGFQSLLED+FL TL L +
Subjt:  ---EYNVEGFQSLLEDKFLETLFLQS

XP_038887166.1 MADS-box protein SVP-like [Benincasa hispida]6.63e-7265.52Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTK-PNSSYDLNRFFSDRKNKI
        MGRG L+LKLIPN KSRRTTF+KRKKSL+KKAYELSTLCDVQTC+FIASDCDPSTHFETWPPNH QIH MIRSYKSHSF K   +SY+L++FFS R NKI
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTK-PNSSYDLNRFFSDRKNKI

Query:  LTNTSKLLHNV-------VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIG---MDTP---PSQTEDEETTQFNISDLFNEPDEFEEYNV
         T TSKL HNV       +D  SEHQL ELL +LDSKI V + MI+FMEADYDHLI++  G   +DTP   PS+T+  ET + +I++     +  E YNV
Subjt:  LTNTSKLLHNV-------VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIG---MDTP---PSQTEDEETTQFNISDLFNEPDEFEEYNV

Query:  EGF
        E F
Subjt:  EGF

TrEMBL top hitse value%identityAlignment
A0A0A0LAL9 MADS-box domain-containing protein7.51e-14199.5Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL
        MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKIL

Query:  TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFEEYNVEGFQSLLEDKFLET
        TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFN+SDLFNEPDEFEEYNVEGFQSLLEDKFLET
Subjt:  TNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFEEYNVEGFQSLLEDKFLET

Query:  L
        L
Subjt:  L

A0A5D3DXK1 Agamous-like MADS-box protein AGL39.29e-5087.63Show/hide
Query:  MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEET
        MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILT+TSKLLHNV DHQS++QL+ELL ALDSKI V N+MIEFMEADYD LIDQA+GMDT PSQTEDEET
Subjt:  MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTNTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEET

A0A6J1F370 agamous-like MADS-box protein AGL63.71e-5556.67Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPN--SSYDLNRFFSDRKNK
        MGRG LSLKLI NPKSRRTTF KRKKSL+KKAYELSTLCDVQTC+ IAS+      FETWP +  Q+  MIRSYKS SF K +  SSYDLN+FFSDRKNK
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPN--SSYDLNRFFSDRKNK

Query:  ILTNTSKLLHNV-----------VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQT----EDEETTQFNISDLFNEPDEFEE
        I+T TSKL   V           +D  SEHQL  L+  LDSKI VA+ MIEFMEADYD+LI+ A+ + +   Q     E E + + NIS+L  E +   +
Subjt:  ILTNTSKLLHNV-----------VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQT----EDEETTQFNISDLFNEPDEFEE

Query:  YNVEGFQSLL
        Y +EG   +L
Subjt:  YNVEGFQSLL

A0A6J1F4C8 agamous-like MADS-box protein AGL141.06e-2844.31Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFI-----ASDCDPS---THFETWPPNHHQIHQMIRSYKSHSFT-KPNSSYDLNRF
        M RG LS  LI N KSR +TF +RK SL+KKAYELSTLCDV+TC+ I     A D DPS     F TWP N  ++  MI +YK+ +   +    +DL+ +
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFI-----ASDCDPS---THFETWPPNHHQIHQMIRSYKSHSFT-KPNSSYDLNRF

Query:  FSDRKNKILTNTSKLLHNV-----------VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHL
        FSDRK K++T   K    V           +D  SE QL E ++ LDS+I  A  M++FM+AD ++L
Subjt:  FSDRKNKILTNTSKLLHNV-----------VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHL

A0A6J1J5U6 agamous-like MADS-box protein AGL142.86e-2939.3Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFI-----ASDCDPS---THFETWPPNHHQIHQMIRSYKSHSFT-KPNSSYDLNRF
        M RG LS  LI N KSR +TF +RK SL+KKAYELSTLCDV+TC+ I     A D DPS     F TWP N  ++  MI +YK+ +   +    +DL+ +
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFI-----ASDCDPS---THFETWPPNHHQIHQMIRSYKSHSFT-KPNSSYDLNRF

Query:  FSDRKNKILTNTSKLLHNV-----------VDHQSEHQLMELLDALDSKIRVANDMIEFMEAD------------YDHLIDQAIGMDTPP-SQTEDEETT
        FSDRK K++T   K    V           +D  SE QL E ++ LDS+I  A  MI+FM+AD            Y++++       TP  S  E E T 
Subjt:  FSDRKNKILTNTSKLLHNV-----------VDHQSEHQLMELLDALDSKIRVANDMIEFMEAD------------YDHLIDQAIGMDTPP-SQTEDEETT

Query:  QFNISDLFNEPDEFEEYNVEGFQSLLEDK
          N  +   + DE    N E  + LLED+
Subjt:  QFNISDLFNEPDEFEEYNVEGFQSLLEDK

SwissProt top hitse value%identityAlignment
A0A217EJJ0 Agamous-like MADS-box protein AGL117.1e-0727.71Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYK--SHSFTKPNSSYDLNRFFSDRKNK
        MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  L +      S+    +  +++ I   I  YK  S   T   S+ ++N  +  +++ 
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYK--SHSFTKPNSSYDLNRFFSDRKNK

Query:  ILTNTSKLLHNVVDHQSEHQLMEL----LDALDSKI-----RVANDMIEFMEADYDHLIDQAIGMD
         L    ++L N   H     L  L    L  L++++     R+ +   E + A+ ++L  + I ++
Subjt:  ILTNTSKLLHNVVDHQSEHQLMEL----LDALDSKI-----RVANDMIEFMEADYDHLIDQAIGMD

F6I457 Agamous-like MADS-box protein AGL117.1e-0727.71Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYK--SHSFTKPNSSYDLNRFFSDRKNK
        MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  L +      S+    +  +++ I   I  YK  S   T   S+ ++N  +  +++ 
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYK--SHSFTKPNSSYDLNRFFSDRKNK

Query:  ILTNTSKLLHNVVDHQSEHQLMEL----LDALDSKI-----RVANDMIEFMEADYDHLIDQAIGMD
         L    ++L N   H     L  L    L  L++++     R+ +   E + A+ ++L  + I ++
Subjt:  ILTNTSKLLHNVVDHQSEHQLMEL----LDALDSKI-----RVANDMIEFMEADYDHLIDQAIGMD

P29383 Agamous-like MADS-box protein AGL38.4e-0834.11Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFT--KPNSSYDLNRFFSDRKNK
        MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  L I S+      F + P     + + +  Y+ HS+    PN S    +   D+   
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFT--KPNSSYDLNRFFSDRKNK

Query:  ILTNTSKLLHNVVDHQSEHQLMELLDALD
         L   S++   ++ H   H L E L  +D
Subjt:  ILTNTSKLLHNVVDHQSEHQLMELLDALD

Q38694 Agamous-like MADS-box protein AGL9 homolog1.9e-0756Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASD
        MGRG + LK+I N  +R+ TF KR+K L+KKAYELS LCD +  L I S+
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASD

Q9FIM0 Agamous-like MADS-box protein AGL827.6e-0930.93Show/hide
Query:  ILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPS----THFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSD--RKNK
        ++ L+ I N K+R TT+ KRK SL KKA E STLC V+TCL +      +    +  E WP +  ++  +IR YK    T      ++  F +D  + N+
Subjt:  ILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPS----THFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSD--RKNK

Query:  ILT-------NTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTP-PSQTEDEETTQFNISDLFNEPDEFEEY
        ++T       N        +D  S  QL  +  A+DSK+   N+ +   E     +  QA  MDTP P    D+   QF +   F+E  +F+ +
Subjt:  ILT-------NTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTP-PSQTEDEETTQFNISDLFNEPDEFEEY

Arabidopsis top hitse value%identityAlignment
AT2G03710.1 K-box region and MADS-box transcription factor family protein6.0e-0934.11Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFT--KPNSSYDLNRFFSDRKNK
        MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  L I S+      F + P     + + +  Y+ HS+    PN S    +   D+   
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFT--KPNSSYDLNRFFSDRKNK

Query:  ILTNTSKLLHNVVDHQSEHQLMELLDALD
         L   S++   ++ H   H L E L  +D
Subjt:  ILTNTSKLLHNVVDHQSEHQLMELLDALD

AT2G03710.2 K-box region and MADS-box transcription factor family protein6.0e-0934.11Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFT--KPNSSYDLNRFFSDRKNK
        MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  L I S+      F + P     + + +  Y+ HS+    PN S    +   D+   
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFT--KPNSSYDLNRFFSDRKNK

Query:  ILTNTSKLLHNVVDHQSEHQLMELLDALD
         L   S++   ++ H   H L E L  +D
Subjt:  ILTNTSKLLHNVVDHQSEHQLMELLDALD

AT2G03710.3 K-box region and MADS-box transcription factor family protein6.0e-0934.11Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFT--KPNSSYDLNRFFSDRKNK
        MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  L I S+      F + P     + + +  Y+ HS+    PN S    +   D+   
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFT--KPNSSYDLNRFFSDRKNK

Query:  ILTNTSKLLHNVVDHQSEHQLMELLDALD
         L   S++   ++ H   H L E L  +D
Subjt:  ILTNTSKLLHNVVDHQSEHQLMELLDALD

AT5G55690.1 MADS-box transcription factor family protein1.5e-0726.57Show/hide
Query:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHF----ETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRK
        MGR ++ +  I N K+R TT+ KRK  L KKA E STLC V TC+ +              E WP +  ++ +++  Y+  + +    +Y +        
Subjt:  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHF----ETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRK

Query:  NKILTNTSKLLH----NVVDHQSEHQLMELLDALDSKIRVAND
         K+   T    +      +D  S + L  +  A+++KI+ A +
Subjt:  NKILTNTSKLLH----NVVDHQSEHQLMELLDALDSKIRVAND

AT5G58890.1 AGAMOUS-like 825.4e-1030.93Show/hide
Query:  ILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPS----THFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSD--RKNK
        ++ L+ I N K+R TT+ KRK SL KKA E STLC V+TCL +      +    +  E WP +  ++  +IR YK    T      ++  F +D  + N+
Subjt:  ILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPS----THFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSD--RKNK

Query:  ILT-------NTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTP-PSQTEDEETTQFNISDLFNEPDEFEEY
        ++T       N        +D  S  QL  +  A+DSK+   N+ +   E     +  QA  MDTP P    D+   QF +   F+E  +F+ +
Subjt:  ILT-------NTSKLLHNVVDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTP-PSQTEDEETTQFNISDLFNEPDEFEEY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGGAATATTAAGTCTTAAGCTCATTCCCAATCCCAAAAGTCGAAGAACAACCTTTCTTAAGAGGAAGAAAAGTCTGATTAAGAAGGCTTACGAGCTTTCCAC
CCTTTGCGATGTTCAAACTTGCCTTTTCATTGCTTCTGACTGTGACCCCTCCACTCACTTCGAAACTTGGCCTCCCAATCATCACCAAATCCACCAGATGATCCGTTCTT
ATAAATCCCACTCTTTCACCAAACCCAACTCCTCTTATGATCTTAACCGCTTCTTCTCTGATCGCAAGAACAAAATCCTAACTAACACATCTAAACTTCTCCACAATGTT
GTGGATCACCAATCCGAACATCAATTGATGGAGTTGTTGGATGCTTTGGATTCCAAGATTAGAGTTGCAAACGACATGATTGAGTTCATGGAGGCCGATTATGATCACTT
GATTGACCAAGCAATTGGCATGGATACACCTCCTTCCCAAACAGAGGATGAGGAAACCACTCAATTTAACATTTCAGACCTTTTTAATGAGCCAGATGAGTTTGAAGAAT
ACAACGTCGAGGGTTTCCAATCTCTGCTTGAGGACAAGTTTCTGGAAACTCTGTTTCTACAGTCTCTCGTGTTCATTATAAGTGAGGCAAAGGCTTTCCTGAAGGTGGCT
ACTGGCATCTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGGAATATTAAGTCTTAAGCTCATTCCCAATCCCAAAAGTCGAAGAACAACCTTTCTTAAGAGGAAGAAAAGTCTGATTAAGAAGGCTTACGAGCTTTCCAC
CCTTTGCGATGTTCAAACTTGCCTTTTCATTGCTTCTGACTGTGACCCCTCCACTCACTTCGAAACTTGGCCTCCCAATCATCACCAAATCCACCAGATGATCCGTTCTT
ATAAATCCCACTCTTTCACCAAACCCAACTCCTCTTATGATCTTAACCGCTTCTTCTCTGATCGCAAGAACAAAATCCTAACTAACACATCTAAACTTCTCCACAATGTT
GTGGATCACCAATCCGAACATCAATTGATGGAGTTGTTGGATGCTTTGGATTCCAAGATTAGAGTTGCAAACGACATGATTGAGTTCATGGAGGCCGATTATGATCACTT
GATTGACCAAGCAATTGGCATGGATACACCTCCTTCCCAAACAGAGGATGAGGAAACCACTCAATTTAACATTTCAGACCTTTTTAATGAGCCAGATGAGTTTGAAGAAT
ACAACGTCGAGGGTTTCCAATCTCTGCTTGAGGACAAGTTTCTGGAAACTCTGTTTCTACAGTCTCTCGTGTTCATTATAAGTGAGGCAAAGGCTTTCCTGAAGGTGGCT
ACTGGCATCTGCTGATCCTGAATTCATATTCCTCATTATGCCAGACACAATGACTCAAATCAATAGGCTGTGATTTGGAAAATCCAGCAGCTTTCATCTGCAAAACCATC
CACGGAG
Protein sequenceShow/hide protein sequence
MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTNTSKLLHNV
VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNISDLFNEPDEFEEYNVEGFQSLLEDKFLETLFLQSLVFIISEAKAFLKVA
TGIC