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CsGy3G021013 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G021013
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationGy14Chr3:18836088..18836696
RNA-Seq ExpressionCsGy3G021013
SyntenyCsGy3G021013
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060761.1 formin-like protein 3 [Cucumis melo var. makuwa]1.92e-8891.28Show/hide
Query:  MAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYT
        M  SAAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLSPPPPP  PPPPSPC PTVSSRPPPPRFIYT SSPAPPPPRFTYT
Subjt:  MAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYT

Query:  TGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TGVPGNLYEIDANNSWYYFSGT  TRPGMAAVVVA+GCGALHLMGFSKW
Subjt:  TGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

KAE8650628.1 hypothetical protein Csa_011452 [Cucumis sativus]1.72e-9497.32Show/hide
Query:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP SPC PTVSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGF
        TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAV VAIGCGALHLMGF
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGF

KAE8653002.1 hypothetical protein Csa_004575 [Cucumis sativus]2.78e-7997.67Show/hide
Query:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP SPC PTVSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTR
        TYTTGVPGNLYEIDANNSWYYFSGTRRTR
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTR

XP_011651408.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]3.97e-9897.37Show/hide
Query:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP SPC PTVSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAV VAIGCGALHLMGFSKW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

XP_023528316.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]2.04e-6271.52Show/hide
Query:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFT
        MKMAPSAAI LS SFL   L LA+SQ  SP  VDPQ+P++EIKCGSCPCSNPC++Q   PPPPPPPPPP+ C P +   PPPPRFIYT  SP PPPPRF 
Subjt:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFT

Query:  YTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        YTTGVPGNLY+IDANN WYYFSGT R RP  A +VVA+GCGAL+LM F KW
Subjt:  YTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

TrEMBL top hitse value%identityAlignment
A0A0A0L7R0 Uncharacterized protein1.92e-9897.37Show/hide
Query:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP SPC PTVSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAV VAIGCGALHLMGFSKW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

A0A5A7V4T2 Formin-like protein 39.31e-8991.28Show/hide
Query:  MAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYT
        M  SAAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLSPPPPP  PPPPSPC PTVSSRPPPPRFIYT SSPAPPPPRFTYT
Subjt:  MAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYT

Query:  TGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TGVPGNLYEIDANNSWYYFSGT  TRPGMAAVVVA+GCGALHLMGFSKW
Subjt:  TGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

A0A6A1VEJ2 Uncharacterized protein6.93e-2547.48Show/hide
Query:  LLSFSFLSHLLLLANSQTSSPILVD---PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVP
        LL F F+S    + +    S +L +   PQ  DAEIKCG+CPC NPC QQ  P PPPPPPPPP P  P  ++    P   Y T   APPPPRF Y TGVP
Subjt:  LLSFSFLSHLLLLANSQTSSPILVD---PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVP

Query:  GNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHL
        G+LY  D  N+W Y+SG  R    +A +++ + CG L L
Subjt:  GNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHL

A0A6J1GAW3 leucine-rich repeat extensin-like protein 23.45e-3454.97Show/hide
Query:  MAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCP-CSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTY
        MAPSAAI LS       LLL+  QTS PI   P +PD EI C S   CSNP +QQL P PP PPPP P            PPRF YTT S  PPP RF Y
Subjt:  MAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCP-CSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTY

Query:  TTGVPGNLYEIDANNSWYYFSGTRRTRPGMAA-VVVAIGCGALHLMGFSKW
        TTGVP +LY+ D  N WYYFSG     P MAA VVV + CGAL L+ F KW
Subjt:  TTGVPGNLYEIDANNSWYYFSGTRRTRPGMAA-VVVAIGCGALHLMGFSKW

A0A6J1J7W0 probable pathogenesis-related protein ARB_028611.41e-5970.47Show/hide
Query:  MAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYT
        MAPSAAI LS SFL   L LANSQ  SP  VDPQ+P++EIKCGSCPCSNPC++Q    PPPPPPPPP+ C P +   PPPPRFIYT+ SP PPPPRF YT
Subjt:  MAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYT

Query:  TGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TGVPGNLY+IDANN WYYFSGT R     AA+VVA+GCGAL+LM F KW
Subjt:  TGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein1.8e-0438.1Show/hide
Query:  LSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPP-------PPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGN
        L+  +L+A    +SPI+++ ++  AE+         PC+Q   PPPP PP       PPPPSP  P  SS PP P        P PPPP + +T   PG+
Subjt:  LSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPP-------PPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGN

Query:  LYEID
        LY I+
Subjt:  LYEID

AT1G23040.1 hydroxyproline-rich glycoprotein family protein7.6e-0842.39Show/hide
Query:  LANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEID
        L N  +SS   ++ +  D   +     CS  CIQ   PP PPPP PPP  C P  +  PPPP+ + ++  P PPP  F Y TG PGNLY +D
Subjt:  LANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEID

AT1G70990.1 proline-rich family protein4.6e-0538.05Show/hide
Query:  APSAAILLSFSFLSHLLLL--ANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP-PPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFT
        A +A +L +  FL+  +++  ++S T+  +  DP      IKC       PC+Q + PP PPPP PPPPS   P     P PP+  Y      PPP  + 
Subjt:  APSAAILLSFSFLSHLLLL--ANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP-PPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFT

Query:  YTTGVPGNLYEID
        Y TG PG LY ID
Subjt:  YTTGVPGNLYEID

AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein3.1e-0942.25Show/hide
Query:  TVSSRPPPPRFIY-TTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALH
        T   RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S   R       V+V +G G ++
Subjt:  TVSSRPPPPRFIY-TTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALH

AT3G22800.1 Leucine-rich repeat (LRR) family protein5.1e-0445.71Show/hide
Query:  IKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPP-PPRFTYTTGVPGNLY
        I C S  CS P      PPPPPPPPPPP P  P     PPPP ++Y +  P PP PP + Y    P  +Y
Subjt:  IKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPP-PPRFTYTTGVPGNLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCACCTCCTTCTTCTCGCCAACTCCCAAACCTCCTCCCCGATATTGGTAGATCCT
CAAAATCCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCGCCTCCTCCTCCTCCTTCT
CCTTGTGCTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTT
CCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGT
GGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
CCACAAACTCAATCCTCATCGATTTTAGAGCTTTTCCTTTACATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCACCTCCTTCTT
CTCGCCAACTCCCAAACCTCCTCCCCGATATTGGTAGATCCTCAAAATCCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAA
CTATCGCCACCACCGCCGCCTCCGCCTCCTCCTCCTCCTTCTCCTTGTGCTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCA
CCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGG
ACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGCAAGTT
AATGTGTTGAATTTGGTCTAATTACTAAAAGAAATATATTTACTCTTAGTTCATCATAAAGTATAAGTATATATATATATATTA
Protein sequenceShow/hide protein sequence
MKMAPSAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGV
PGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW