; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G021490 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G021490
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNucleolar protein 10
Genome locationGy14Chr3:19434313..19438175
RNA-Seq ExpressionCsGy3G021490
SyntenyCsGy3G021490
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR007264 - H/ACA ribonucleoprotein complex, subunit Nop10
IPR036756 - H/ACA ribonucleoprotein complex, subunit Nop10 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
THU64153.1 hypothetical protein C4D60_Mb01t23480 [Musa balbisiana]3.15e-4098.44Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

XP_008447412.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo]2.47e-4098.44Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

XP_009410656.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis]1.74e-4098.44Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

XP_011651438.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus]8.59e-41100Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

XP_038714054.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Tripterygium wilfordii]2.47e-4098.44Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINENGDKVYTTKKESPLGLAT+SAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

TrEMBL top hitse value%identityAlignment
A0A1S3BHD2 Nucleolar protein 101.19e-4098.44Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

A0A2G9GIP1 Nucleolar protein 104.16e-41100Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

A0A7J7CYK9 Nucleolar protein 104.16e-41100Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

A0A7J7D654 Nucleolar protein 101.19e-4098.44Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINENGDKVYTTKKESPLGLAT+SAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

M0S1K9 Nucleolar protein 108.41e-4198.44Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

SwissProt top hitse value%identityAlignment
Q6DRH5 H/ACA ribonucleoprotein complex subunit 33.6e-2072.58Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP
        M+LQFY+NENG++VYT KK  P G  T SAHPARFSPDDK+SR RV +KKRFGLL TQQP P
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP

Q93XX8 H/ACA ribonucleoprotein complex subunit 3-like protein9.8e-2685.94Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQ YINE G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  P +Y
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

Q9CQS2 H/ACA ribonucleoprotein complex subunit 38.9e-1967.74Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP
        M+LQ+Y+NE GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP P
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP

Q9NPE3 H/ACA ribonucleoprotein complex subunit 38.9e-1967.74Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP
        M+LQ+Y+NE GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP P
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP

Q9V5P6 H/ACA ribonucleoprotein complex subunit 31.2e-1868.75Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYL + INENGD+VYT KK +  G  T SAHPARFSP+DKYSRQR+ +KKRFGLL TQ+P P Y
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

Arabidopsis top hitse value%identityAlignment
AT2G20490.1 nucleolar RNA-binding Nop10p family protein7.0e-2785.94Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQ YINE G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  P +Y
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

AT2G20490.2 nucleolar RNA-binding Nop10p family protein6.5e-2584.38Show/hide
Query:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQ YINE G+KVYTT KESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  P +Y
Subjt:  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCTTCAGTTTTACATAAACGAAAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGCTCGTTTCTCCCC
TGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA
mRNA sequenceShow/hide mRNA sequence
CCGCCCTTCGTCCCTACCTCCCGTTCATTGGCGCGCCCCCGGTCGTTCGTTCTTGGTCTCGCCGCCGTTCGCCTTTTGTTGCACCTCTGTTCATTTCGTTGGGTGCCTAT
CGACGATGTATCTTCAGTTTTACATAAACGAAAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGCTCGTTTC
TCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGAACTCAACGCACTCTCAAATC
ACAACTCTATGGCAGTTCTCAAGTGTTTGTTTCCCAAACCCCCATCAATAGTTAGATCGTGACTTGGTTAAACTTTGATAGATAGTTTGCCTTTTCTTTCTATGGCTTGT
AATTGAGCTGTAAAGCACAATTCACTGTTGAACCTTTCTTTAAGCTTGTCAGTGGCTTTATGTTTGTATTAAACTTTATTTTACTGAAAGCAAACTTTTATGTACTTTGA
AGATCTGGTTTTAGTGCAAGATAATGTGCCTTTTTTCATACTTTTCTCCTCCTTTTGTACAAACATTGCAGTTGTCAAGCACCAATGTCTGCTGATCCTTTCTAAAGTTG
TTGGCATTGTTTATGTATTTAACCTGATTCATTGACAATTAATTGAGTCTAAGCCATAAGGTGGTAGTCTCCAATTTCCTTGGTTTTGACATTCAAGTTCCATCGACGTT
TGTGATTCAAGACGCATATGCACCGGAATTCATCTCTAGACTATGAAGGTATGCAAGGTTCATTTTATGATCCATTGATTTGAAGAACTATAATATTTTAGAGATGATCA
TGTGCTTCTCTTGGCCTGGGAATATGGTTTTTGTTCCAGGGTATTTGAATTTGAACATTGAAAAAGTATGTTCAAATGGGTTATAGGAGCTAGGAGTTTGGGCCTAAGTT
TGCCATATTGCTTGCAAAAATATAGCTGAACGGTTAGGTGCTTGACTCTTCTGCCCCACTTAAGGAATAATTAACTGGATGCAGATATAAAATTAGCTTATGAAACAGAT
ATATCAT
Protein sequenceShow/hide protein sequence
MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY