CuGenDBv2

Gene ID	CsGy3G022590
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	vesicle-associated protein 4-1
Genome location	Gy14Chr3:21268248..21270213
RNA-Seq Expression	CsGy3G022590
Synteny	CsGy3G022590
Gene Ontology terms	GO:0061817 - endoplasmic reticulum-plasma membrane tethering (biological process) GO:0090158 - endoplasmic reticulum membrane organization (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0005886 - plasma membrane (cellular component)
InterPro domains	IPR008962 - PapD-like superfamily IPR016763 - Vesicle-associated membrane-protein-associated protein

Homology

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GenBank top hits

e value

%identity

Alignment

TYJ95826.1 vesicle-associated protein 4-1 [Cucumis melo var. makuwa]

2.60e-20

81.97

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        MKASSSS TVSSV+KSLLPPRR+LRL PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

XP_008454625.1 PREDICTED: vesicle-associated protein 4-1 [Cucumis melo]

9.39e-21

83.61

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        MKASSSS TVSSV+KSLLPPRRRLRL PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

XP_011652378.1 vesicle-associated protein 4-1 [Cucumis sativus]

2.56e-20

81.97

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        +KASSSS TVSSV+KSLLPPRRRLRL PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

XP_022937296.1 vesicle-associated protein 4-1-like [Cucurbita moschata]

2.98e-20

81.97

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        +KASSSSMTVSSV+KSLLPPRRRL L PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

XP_023535121.1 vesicle-associated protein 4-1-like [Cucurbita pepo subsp. pepo]

2.98e-20

81.97

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        +KASSSSMTVSSV+KSLLPPRRRL L PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFW4 MSP domain-containing protein

1.24e-20

81.97

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        +KASSSS TVSSV+KSLLPPRRRLRL PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

A0A1S3BZ62 vesicle-associated protein 4-1

4.55e-21

83.61

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        MKASSSS TVSSV+KSLLPPRRRLRL PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

A0A5A7T1W8 Vesicle-associated protein 4-1

4.55e-21

83.61

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        MKASSSS TVSSV+KSLLPPRRRLRL PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

A0A5D3BAA2 Vesicle-associated protein 4-1

1.26e-20

81.97

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        MKASSSS TVSSV+KSLLPPRR+LRL PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

A0A6J1F9Z2 vesicle-associated protein 4-1-like

1.44e-20

81.97

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Query:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        +KASSSSMTVSSV+KSLLPPRRRL L PNNSLFFP+ P    +VKSAIRMKNTSRSHVAFK
Subjt:  MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

SwissProt top hits

e value

%identity

Alignment

Q1ECE0 Vesicle-associated protein 4-1

3.2e-10

56.9

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Query:  SSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        S   +T+SSV++SLLP RRRLRL P++ L+FP+ P    +V+SAI++KNTS+SH AFK
Subjt:  SSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

Q8LPQ7 Vesicle-associated protein 4-3

7.8e-09

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Query:  KASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        +++++  ++SSV++SLLP +RRL+L P+  L+FP+ P    +V+SAI++KNTS+SHVAFK
Subjt:  KASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

Q8VYN2 Vesicle-associated protein 4-2

9.2e-10

58.18

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Query:  SMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        S +VSSV+KS LP +RRL+L P+  L+FP+ P    +V+SAI++KNTS+SHVAFK
Subjt:  SMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

Arabidopsis top hits

e value

%identity

Alignment

AT4G05060.1 PapD-like superfamily protein

5.5e-10

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Query:  KASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        +++++  ++SSV++SLLP +RRL+L P+  L+FP+ P    +V+SAI++KNTS+SHVAFK
Subjt:  KASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

AT4G21450.1 PapD-like superfamily protein

6.5e-11

58.18

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Query:  SMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        S +VSSV+KS LP +RRL+L P+  L+FP+ P    +V+SAI++KNTS+SHVAFK
Subjt:  SMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

AT4G21450.2 PapD-like superfamily protein

6.5e-11

58.18

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Query:  SMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        S +VSSV+KS LP +RRL+L P+  L+FP+ P    +V+SAI++KNTS+SHVAFK
Subjt:  SMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

AT4G21450.3 PapD-like superfamily protein

1.8e-08

44.44

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Query:  SMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATIC-----------------EVKSAIRMKNTSRSHVAFK
        S +VSSV+KS LP +RRL+L P+  L+FP F +                    +V+SAI++KNTS+SHVAFK
Subjt:  SMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATIC-----------------EVKSAIRMKNTSRSHVAFK

AT5G54110.1 membrane-associated mannitol-induced

2.2e-11

56.9

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Query:  SSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK
        S   +T+SSV++SLLP RRRLRL P++ L+FP+ P    +V+SAI++KNTS+SH AFK
Subjt:  SSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFK

Sequences

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CDS sequence

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ATGAAAGCTTCATCGTCTTCTATGACGGTTTCCTCTGTGTCCAAGTCGCTCTTGCCTCCTCGACGTAGGCTCCGTCTTCATCCTAACAATTCTTTGTTCTTTCCTCATTT
TCCTGCTACCATTTGCGAGGTAAAGAGCGCCATCAGAATGAAGAATACAAGCAGATCCCATGTAGCTTTCAAGGAATCAGGAGATGTACGATTTTTACTTGATCTAGCTC
TACAGATAATGATGTGA

mRNA sequence

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Protein sequence

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MKASSSSMTVSSVSKSLLPPRRRLRLHPNNSLFFPHFPATICEVKSAIRMKNTSRSHVAFKESGDVRFLLDLALQIMM

CsGy3G022590 (gene) of Cucumber (Gy14) v2.1 genome