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CsGy3G023565 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G023565
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTranscription factor UPBEAT1
Genome locationGy14Chr3:23310196..23310468
RNA-Seq ExpressionCsGy3G023565
SyntenyCsGy3G023565
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038125.1 basic helix-loop-helix protein [Cucumis melo var. makuwa]7.91e-5195.56Show/hide
Query:  MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        MEILAKDTVSDRRIAKQVIKKKVEMVSR SRSSEKRICLKRIR+L+KM+PKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
Subjt:  MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

KAE9618351.1 putative myc-type, basic helix-loop-helix (bHLH) domain-containing protein [Lupinus albus]2.04e-1652.81Show/hide
Query:  EILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        ++LAK +V  +R  K V+KK+V      SR   K I  +R+R LK++VP SES+EL+GLF ETADYI+ LQ +VR+MQ +V+VL GSDE
Subjt:  EILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

KGN58133.1 hypothetical protein Csa_017541 [Cucumis sativus]8.21e-53100Show/hide
Query:  MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
Subjt:  MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

XP_019427947.1 PREDICTED: transcription factor UPBEAT1-like [Lupinus angustifolius]4.51e-1466.67Show/hide
Query:  KRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        +++R LKK+VP SES+EL+GLFRETADYI+ LQ +VR+M+ LV+VL GSDE
Subjt:  KRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

XP_034911859.1 transcription factor UPBEAT1-like [Populus alba]6.08e-1466.67Show/hide
Query:  KRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        +R+R LKK++P SESM L+GLFRETADYI+ LQM+VR+MQ +V VL GSD+
Subjt:  KRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

TrEMBL top hitse value%identityAlignment
A0A0A0L8J6 Uncharacterized protein3.98e-53100Show/hide
Query:  MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
Subjt:  MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

A0A4V5ZXB7 Uncharacterized protein2.94e-1466.67Show/hide
Query:  KRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        +R+R LKK++P SESM L+GLFRETADYI+ LQM+VR+MQ +V VL GSD+
Subjt:  KRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

A0A5A7T9M0 Basic helix-loop-helix protein3.83e-5195.56Show/hide
Query:  MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        MEILAKDTVSDRRIAKQVIKKKVEMVSR SRSSEKRICLKRIR+L+KM+PKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
Subjt:  MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

A0A6A4QW51 Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein9.89e-1752.81Show/hide
Query:  EILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        ++LAK +V  +R  K V+KK+V      SR   K I  +R+R LK++VP SES+EL+GLF ETADYI+ LQ +VR+MQ +V+VL GSDE
Subjt:  EILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

B9GSV5 Uncharacterized protein9.07e-1464.71Show/hide
Query:  KRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        +R+R LKK++P SESM L+GLFRETADYI+ LQM+V++MQ +V VL GSD+
Subjt:  KRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE

SwissProt top hitse value%identityAlignment
O22901 Transcription factor UPBEAT12.2e-0742.31Show/hide
Query:  RRIAKQVIKKKVEMVSRSSRSSEKRICL---KRIRRLKKMVPKSESME-LNGLFRETADYIVWLQMKVRMMQALVHVL
        R+ A++ + KK+ +  R S  + +R C    +R++ LK++VP +++ E L+GLFR+TADYI+ L+MKV++MQ +V VL
Subjt:  RRIAKQVIKKKVEMVSRSSRSSEKRICL---KRIRRLKKMVPKSESME-LNGLFRETADYIVWLQMKVRMMQALVHVL

Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators1.6e-0842.31Show/hide
Query:  RRIAKQVIKKKVEMVSRSSRSSEKRICL---KRIRRLKKMVPKSESME-LNGLFRETADYIVWLQMKVRMMQALVHVL
        R+ A++ + KK+ +  R S  + +R C    +R++ LK++VP +++ E L+GLFR+TADYI+ L+MKV++MQ +V VL
Subjt:  RRIAKQVIKKKVEMVSRSSRSSEKRICL---KRIRRLKKMVPKSESME-LNGLFRETADYIVWLQMKVRMMQALVHVL

AT4G30410.1 sequence-specific DNA binding transcription factors2.3e-0434.94Show/hide
Query:  LAKDTVSDRRI---AKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNG-LFRETADYIVWLQMKVRMMQALV
        L K TV  R+I   +K+++++K +  S  + +  KR+  +R + L+ +VP  E M  +  L +ET DYIV LQ +V +M+++V
Subjt:  LAKDTVSDRRI---AKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNG-LFRETADYIVWLQMKVRMMQALV

AT4G30410.2 sequence-specific DNA binding transcription factors2.3e-0434.94Show/hide
Query:  LAKDTVSDRRI---AKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNG-LFRETADYIVWLQMKVRMMQALV
        L K TV  R+I   +K+++++K +  S  + +  KR+  +R + L+ +VP  E M  +  L +ET DYIV LQ +V +M+++V
Subjt:  LAKDTVSDRRI---AKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNG-LFRETADYIVWLQMKVRMMQALV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTTTGGCAAAAGATACGGTCTCAGACAGGCGAATTGCAAAACAAGTGATCAAGAAGAAGGTAGAGATGGTGTCGAGGTCGTCAAGGTCGTCAGAGAAG
AGGATTTGTTTGAAGAGGATTAGGAGGCTGAAGAAGATGGTTCCAAAGAGTGAATCTATGGAGTTGAATGGTCTTTTTAGAGAGACAGCCGATTATATAGTGTGG
TTGCAAATGAAGGTGAGGATGATGCAAGCTTTGGTTCATGTGCTTAATGGCTCTGACGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTTTGGCAAAAGATACGGTCTCAGACAGGCGAATTGCAAAACAAGTGATCAAGAAGAAGGTAGAGATGGTGTCGAGGTCGTCAAGGTCGTCAGAGAAG
AGGATTTGTTTGAAGAGGATTAGGAGGCTGAAGAAGATGGTTCCAAAGAGTGAATCTATGGAGTTGAATGGTCTTTTTAGAGAGACAGCCGATTATATAGTGTGG
TTGCAAATGAAGGTGAGGATGATGCAAGCTTTGGTTCATGTGCTTAATGGCTCTGACGAGTGA
Protein sequenceShow/hide protein sequence
MEILAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLKKMVPKSESMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE