CuGenDBv2

Gene ID	CsGy3G024250
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DUF1713 domain-containing protein
Genome location	Gy14Chr3:24263117..24263509
RNA-Seq Expression	CsGy3G024250
Synteny	CsGy3G024250
Gene Ontology terms	GO:0006397 - mRNA processing (biological process)
InterPro domains	IPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0056277.1 DUF1713 domain-containing protein [Cucumis melo var. makuwa]

5.35e-79

94.62

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ LIRKSPP+RLIAALGAQTSQNLSTPFILHQPLDFDKK DAH HSN+NSASTSNPS FSQFYPSFPFGLCLPQISSTGLLPFEPD VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

KAE8650785.1 hypothetical protein Csa_017463 [Cucumis sativus]

1.98e-85

100

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

KAG7017804.1 hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.06e-74

87.69

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEPD VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

XP_011651574.1 uncharacterized protein LOC101220058 [Cucumis sativus]

1.80e-86

100

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

XP_023526336.1 uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo]

1.65e-73

86.92

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEPD VEQD+SRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDP0 DUF1713 domain-containing protein

8.71e-87

100

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

A0A5A7UNU9 DUF1713 domain-containing protein

2.59e-79

94.62

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ LIRKSPP+RLIAALGAQTSQNLSTPFILHQPLDFDKK DAH HSN+NSASTSNPS FSQFYPSFPFGLCLPQISSTGLLPFEPD VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

A0A6J1EJL0 uncharacterized protein LOC111435191

7.06e-68

82.31

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MAS+LQ LIRKSPPTR IAAL +QTSQNLS P+ILHQPLD D+KPD HC SN+N+ STSNPS FS F+PSFPFGLCL QISSTG + FEPD VE DDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

A0A6J1F832 uncharacterized protein LOC111441723

8.00e-74

86.92

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEP+ VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

A0A6J1J7I5 uncharacterized protein LOC111482461

3.65e-70

84.62

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Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ L+RKS PTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STS+ SHF  FYPSFPFG CLPQISS+G+LPFEPD VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G63150.1 unknown protein

1.7e-08

44.09

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Query:  KKPDAHCHSN-INSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCV--EQDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +KPD    +N + + S +  +   +FYPSF  GLCL      GL   E   +  E++D+++  ++ADSVKKKRK+KMNKHKY+KLRK+L R++
Subjt:  KKPDAHCHSN-INSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCV--EQDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

Sequences

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CDS sequence

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ATGGCGTCCATGCTTCAAAATCTCATTAGAAAATCGCCACCCACGAGATTAATTGCTGCTTTGGGTGCTCAGACCTCACAAAATCTCTCAACACCCTTCATTCTTCACCA
GCCCCTTGATTTTGATAAGAAACCAGATGCACATTGCCATTCTAATATAAACTCTGCTTCTACTTCGAATCCGTCTCATTTTTCCCAGTTTTACCCTAGTTTTCCATTTG
GGCTTTGCTTGCCCCAAATCTCCTCTACTGGGTTGCTTCCGTTCGAGCCCGATTGTGTTGAGCAAGACGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAGAAGAAGAGG
AAACGCAAGATGAACAAGCATAAGTATAAGAAGCTAAGGAAGCGGCTCCGAAGACAGACATAG

mRNA sequence

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Protein sequence

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MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKKR
KRKMNKHKYKKLRKRLRRQT

CsGy3G024250 (gene) of Cucumber (Gy14) v2.1 genome