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CsGy3G024350 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G024350
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationGy14Chr3:24377103..24378437
RNA-Seq ExpressionCsGy3G024350
SyntenyCsGy3G024350
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581070.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]5.75e-4290.14Show/hide
Query:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        +  D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+N SR EENYQYSPMKKWFCCF
Subjt:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

KAG6588926.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]1.63e-3787.32Show/hide
Query:  MAS-DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCC
        MAS DKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAK+N    EENYQYSPMKKWFCC
Subjt:  MAS-DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCC

KGN58221.1 hypothetical protein Csa_017629 [Cucumis sativus]3.82e-47100Show/hide
Query:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
Subjt:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]1.55e-4291.55Show/hide
Query:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        +  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AK+NTSR EENYQYSPMKKWFCCF
Subjt:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]9.05e-4391.55Show/hide
Query:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        +  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AK+NTSR EENYQYSPMKKWFCCF
Subjt:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein1.85e-47100Show/hide
Query:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
Subjt:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

A0A2P5B5J0 RIN4, pathogenic type III effector avirulence factor Avr cleavage site1.62e-2973.08Show/hide
Query:  MAS-DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK---DNTSRQE---ENYQYSPMKKWFCCF
        MAS DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G+       DN S      E Y Y PMKKWFCCF
Subjt:  MAS-DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK---DNTSRQE---ENYQYSPMKKWFCCF

A0A5D3E371 RPM1-interacting protein 4-like2.25e-3796.83Show/hide
Query:  ASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPM
        + DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPM
Subjt:  ASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPM

A0A5J5AK52 AvrRpt-cleavage domain-containing protein7.88e-3275.68Show/hide
Query:  ASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNTAAK-DNTSRQEENYQYSPM-KKWFCCF
        + DKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A  PG  + K DNTS+Q ENYQY PM KKWFCCF
Subjt:  ASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNTAAK-DNTSRQEENYQYSPM-KKWFCCF

A0A5J5BYY8 AvrRpt-cleavage domain-containing protein8.48e-3067.95Show/hide
Query:  ASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAP-------GNTAAKDNTSRQEENYQYSPM-KKWFCCF
        + DKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A        G    K++ S+Q ENYQYSPM KKWFCCF
Subjt:  ASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAP-------GNTAAKDNTSRQEENYQYSPM-KKWFCCF

SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.3e-1558.57Show/hide
Query:  SDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKDNTSRQEENYQYSPMKKWFCC
        SDKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+   +++ +      +      KKW CC
Subjt:  SDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKDNTSRQEENYQYSPMKKWFCC

Q8GYN5 RPM1-interacting protein 41.2e-0539.13Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        +K   +PKFG+WD NNP+SA+G+T IF+K R+E+ S     G++    + S +  N   S      CCF
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.6e-1655.88Show/hide
Query:  SDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCC
        +DKGRPLPKFGEWDVN+P+SAEGFTVIF+KAR+EKK      +    +    +       P KKWFCC
Subjt:  SDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCC

AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein7.2e-1765.67Show/hide
Query:  RPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA--KDNTSRQEENYQYSPMKKWFCCF
        RPLPKFGEWDVN+PASAEGFTVIF+KARD+KK+N A G  A+  +DN   Q+E     P KK FCCF
Subjt:  RPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA--KDNTSRQEENYQYSPMKKWFCCF

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.8e-1583.72Show/hide
Query:  SDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        SDKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  SDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.8e-1657.97Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKDNTSRQEENYQYSPMKKWFCC
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+   +++ +      +      KKW CC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKDNTSRQEENYQYSPMKKWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein7.2e-1753.85Show/hide
Query:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA----PGNTAAKDNTSRQEENYQYSPM-----KKWFC
        MA +KG+PLPKFGEWDVNNPASAEGFTVIFSKA DEKK+ +A    P +  +       ++N  +S        KWFC
Subjt:  MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA----PGNTAAKDNTSRQEENYQYSPM-----KKWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGGATAAAGGTCGCCCCTTGCCGAAGTTTGGCGAGTGGGATGTCAACAACCCAGCATCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAA
GAAGTCAAATGAGGCTCCTGGGAACACAGCAGCAAAAGATAATACATCCAGACAAGAAGAAAATTATCAATATTCTCCCATGAAGAAATGGTTTTGTTGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGGATAAAGGTCGCCCCTTGCCGAAGTTTGGCGAGTGGGATGTCAACAACCCAGCATCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAA
GAAGTCAAATGAGGCTCCTGGGAACACAGCAGCAAAAGATAATACATCCAGACAAGAAGAAAATTATCAATATTCTCCCATGAAGAAATGGTTTTGTTGTTTCTGA
Protein sequenceShow/hide protein sequence
MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF