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CsGy3G024460 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G024460
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioncysteine-rich and transmembrane domain-containing protein A-like
Genome locationGy14Chr3:24478460..24480770
RNA-Seq ExpressionCsGy3G024460
SyntenyCsGy3G024460
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581126.1 hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]1.12e-5986.11Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQP--HPPPPPHQGYQGYFYDGYQPSAPPPPPPP----PPCHHQHYHYDDRNDCSSFLHGCLATLCCCCIL
        M+YPYGY HPPPETYPPPGY PPQPGYPG+QP   PPPPPHQGYQGYFYDGY PSAPPPPPPP    PP  HQHYHYDDRNDCSSFLHGCLATLCCCC+L
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQP--HPPPPPHQGYQGYFYDGYQPSAPPPPPPP----PPCHHQHYHYDDRNDCSSFLHGCLATLCCCCIL

Query:  EECLACFR
        EECLACFR
Subjt:  EECLACFR

XP_004145697.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]1.21e-73100Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC
        MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC

Query:  FR
        FR
Subjt:  FR

XP_008450006.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]1.23e-6695.1Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC
        MSY YGYNHPPPETYPPPGYPPPQPGYPG+QP PPPPPHQGYQGYFYDGYQPSAPPPPPPPPP HHQHYHYDDRNDCSSFLHGCLATLCCCC+LEECLAC
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC

Query:  FR
        FR
Subjt:  FR

XP_022934109.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]4.17e-5986.79Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPP----PPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEE
        M+YPYGY HPPPETYPPPGY PPQPGYPG+QP PPPP HQGYQGYFYDGY PSAPPPPPPP    PP  HQHYHYDDRNDCSSFLHGCLATLCCCC+LEE
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPP----PPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEE

Query:  CLACFR
        CLACFR
Subjt:  CLACFR

XP_038879833.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Benincasa hispida]2.71e-6393.14Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC
        MSYPYGY+ PPPETYPPPGYPPPQPGYPG+QP PPPPPHQGYQGYFYDGYQPSAPPP PPPPP HHQHYHYDDRNDCSSFLHGCLATLCCCC+LEECLAC
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC

Query:  FR
        FR
Subjt:  FR

TrEMBL top hitse value%identityAlignment
A0A0A0L8F9 Uncharacterized protein5.87e-74100Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC
        MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC

Query:  FR
        FR
Subjt:  FR

A0A1S3BP97 cysteine-rich and transmembrane domain-containing protein A-like5.95e-6795.1Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC
        MSY YGYNHPPPETYPPPGYPPPQPGYPG+QP PPPPPHQGYQGYFYDGYQPSAPPPPPPPPP HHQHYHYDDRNDCSSFLHGCLATLCCCC+LEECLAC
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLAC

Query:  FR
        FR
Subjt:  FR

A0A6J1EL88 cysteine-rich and transmembrane domain-containing protein WIH2-like4.00e-5481.13Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAP----PPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEE
        MSYPY ++H PPETYPPPGYPPPQPGYPG     PPPPHQGYQ YFYDGYQPSAP    PP PPPPP HHQHYHYDDR++CSSFL GCLATLCCCC+LEE
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAP----PPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEE

Query:  CLACFR
        CLACFR
Subjt:  CLACFR

A0A6J1F1N0 cysteine-rich and transmembrane domain-containing protein WIH2-like2.02e-5986.79Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPP----PPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEE
        M+YPYGY HPPPETYPPPGY PPQPGYPG+QP PPPP HQGYQGYFYDGY PSAPPPPPPP    PP  HQHYHYDDRNDCSSFLHGCLATLCCCC+LEE
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPP----PPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEE

Query:  CLACFR
        CLACFR
Subjt:  CLACFR

A0A6J1J313 cysteine-rich and transmembrane domain-containing protein WIH2-like2.02e-5986.79Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPP----PPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEE
        M+YPYGY HPPPETYPPPGY PPQPGYPG+QP PPPP HQGYQGYFYDGY PSAPPPPPPP    PP  HQHYHYDDRNDCSSFLHGCLATLCCCC+LEE
Subjt:  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPP----PPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEE

Query:  CLACFR
        CLACFR
Subjt:  CLACFR

SwissProt top hitse value%identityAlignment
Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH21.6e-0647.06Show/hide
Query:  YNHPPPETYPPPGYPPPQPGYP--GYQPHPPPP---PHQGY--QGYFYDGYQPSAPPPP----PPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILE
        YN PP    PP GYPP   GYP   Y P   PP   P QGY  QGY   GY     PPP     PPPP H Q      +     FL GCLA LCCCC+L+
Subjt:  YNHPPPETYPPPGYPPPQPGYP--GYQPHPPPP---PHQGY--QGYFYDGYQPSAPPPP----PPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILE

Query:  EC
         C
Subjt:  EC

Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein7.9e-1754.95Show/hide
Query:  PYGY-NHPPPETYPPP-----GYPPPQPGYPGYQPHPPPPPHQGYQGYFYDG---YQPSAPPPPPPP---PPCHHQHYHYDDRND-CSSFLHGCLATLCC
        P GY + PPP  YP P     GYPPPQP Y GY P    P   GYQGYF  G   +Q   PPPPPPP     CHH H+HY D +  C SF+ GCLA LCC
Subjt:  PYGY-NHPPPETYPPP-----GYPPPQPGYPGYQPHPPPPPHQGYQGYFYDG---YQPSAPPPPPPP---PPCHHQHYHYDDRND-CSSFLHGCLATLCC

Query:  CCILEECLACF
        CC+LEEC  CF
Subjt:  CCILEECLACF

AT1G12810.2 proline-rich family protein1.0e-1142.36Show/hide
Query:  PYGY-NHPPPETYPPP-----GYPPPQPGYPGYQPHPPPPPHQGYQGYFYDG---YQPSAPPPPPPP---PPCHHQHYHYDDRND-CSSFLHGC------
        P GY + PPP  YP P     GYPPPQP Y GY P    P   GYQGYF  G   +Q   PPPPPPP     CHH H+HY D +  C SF+ GC      
Subjt:  PYGY-NHPPPETYPPP-----GYPPPQPGYPGYQPHPPPPPHQGYQGYFYDG---YQPSAPPPPPPP---PPCHHQHYHYDDRND-CSSFLHGC------

Query:  ---------------------------LATLCCCCILEECLACF
                                   LA LCCCC+LEEC  CF
Subjt:  ---------------------------LATLCCCCILEECLACF

AT2G41420.1 proline-rich family protein1.1e-0747.06Show/hide
Query:  YNHPPPETYPPPGYPPPQPGYP--GYQPHPPPP---PHQGY--QGYFYDGYQPSAPPPP----PPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILE
        YN PP    PP GYPP   GYP   Y P   PP   P QGY  QGY   GY     PPP     PPPP H Q      +     FL GCLA LCCCC+L+
Subjt:  YNHPPPETYPPPGYPPPQPGYP--GYQPHPPPP---PHQGY--QGYFYDGYQPSAPPPP----PPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILE

Query:  EC
         C
Subjt:  EC

AT3G49845.1 unknown protein6.1e-0946.49Show/hide
Query:  MSYPYGYNHPPPETYPPPGYPP----PQPGYP--GYQPHPPPPPHQGY-QGYFYDGYQP-----SAPPPPP---PPPPCHHQ--HYHYDDRNDCSSFLHG
        +S P    +PP E YPP GYPP    P P YP  GY P   PPP QGY QGY   GY P       PP  P   PPPP + Q    +  D+ D   F+ G
Subjt:  MSYPYGYNHPPPETYPPPGYPP----PQPGYP--GYQPHPPPPPHQGY-QGYFYDGYQP-----SAPPPPP---PPPPCHHQ--HYHYDDRNDCSSFLHG

Query:  CLATLCCCCILEEC
        CLA LCCC +LE C
Subjt:  CLATLCCCCILEEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACCCTTACGGCTACAACCATCCTCCGCCCGAAACCTACCCTCCTCCTGGGTACCCTCCACCGCAGCCTGGATATCCCGGCTATCAGCCACACCCGCCG
CCACCGCCGCATCAAGGCTATCAAGGCTATTTCTATGATGGGTATCAGCCATCGGCCCCCCCTCCCCCTCCTCCTCCACCGCCTTGTCATCATCAGCACTATCAC
TACGATGATCGAAATGATTGTTCCTCCTTCCTTCATGGATGCTTAGCTACACTTTGTTGTTGTTGTATATTGGAGGAGTGCTTGGCCTGCTTCCGATAG
mRNA sequenceShow/hide mRNA sequence
CCCCATTACCCACCACCTTAAGCAATTCTGCTATCGTTTTCATCTTCTTTCTTCTTTCTTCTTCCTCACATCTCCAAATTTCTCCATTTCCATTCCCAAAGAATT
ATGAGTTACCCTTACGGCTACAACCATCCTCCGCCCGAAACCTACCCTCCTCCTGGGTACCCTCCACCGCAGCCTGGATATCCCGGCTATCAGCCACACCCGCCG
CCACCGCCGCATCAAGGCTATCAAGGCTATTTCTATGATGGGTATCAGCCATCGGCCCCCCCTCCCCCTCCTCCTCCACCGCCTTGTCATCATCAGCACTATCAC
TACGATGATCGAAATGATTGTTCCTCCTTCCTTCATGGATGCTTAGCTACACTTTGTTGTTGTTGTATATTGGAGGAGTGCTTGGCCTGCTTCCGATAGACGATT
GCAAAATAGTGTTTCTTCTTCAGTCGGTTCAGCCATGCTGTGTTCATGTCTTCTATTGTGCTGTGTTCATGTCTTCTATTATGAATCGTCGCATCACTTGAAACA
AGATTTGTAGTTTCTGGTTTGTGTGATTGCAAACTATATCTGTATTGTTTGATATCTAAATGTTCTTATTTACTTTTATACATACCTAAACAAATAGTAGATAAT
ACTATTATAGACTTGGAATCCCTATTGTTGTCATCCATATCAATTTCTTTAAGATTTTGATGCATGGTTTCTGTGGAGCCTTGATACAGAAAGCA
Protein sequenceShow/hide protein sequence
MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGCLATLCCCCILEECLACFR