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CsGy3G024795 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G024795
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioncyclic nucleotide-gated ion channel 1-like
Genome locationGy14Chr3:25063089..25064323
RNA-Seq ExpressionCsGy3G024795
SyntenyCsGy3G024795
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005216 - ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650812.1 hypothetical protein Csa_023859, partial [Cucumis sativus]3.74e-68100Show/hide
Query:  SFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFP
        SFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFP
Subjt:  SFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFP

Query:  SPFVEEIKKEL
        SPFVEEIKKEL
Subjt:  SPFVEEIKKEL

TYK31713.1 cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa]2.78e-5590.27Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV
        L SFGSNLTTSS + ENIFAAL+TI+GILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKK  EIDFWIDYY+FQKKKEIKEFV DKFEW+NDVNLKTLLDV
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV

Query:  FPSPFVEEIKKEL
        FPSPFVEEIKKEL
Subjt:  FPSPFVEEIKKEL

XP_008449547.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]1.09e-5591.15Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV
        L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDV
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV

Query:  FPSPFVEEIKKEL
        F SPFVEEIKKEL
Subjt:  FPSPFVEEIKKEL

XP_011651604.1 cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus]1.35e-5487.61Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV
        L SFGSNLTTSS   EN FAAL+TI GILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD EID WIDYY+FQKKKEIKEFVR+KFEWKNDVNL TLLDV
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV

Query:  FPSPFVEEIKKEL
        FPSPF EEIKKEL
Subjt:  FPSPFVEEIKKEL

XP_016900694.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo]1.16e-5691.15Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV
        L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDV
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV

Query:  FPSPFVEEIKKEL
        F SPFVEEIKKEL
Subjt:  FPSPFVEEIKKEL

TrEMBL top hitse value%identityAlignment
A0A1S3BLM4 cyclic nucleotide-gated ion channel 1-like isoform X15.26e-5691.15Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV
        L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDV
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV

Query:  FPSPFVEEIKKEL
        F SPFVEEIKKEL
Subjt:  FPSPFVEEIKKEL

A0A1S4DYA3 cyclic nucleotide-gated ion channel 1-like isoform X35.60e-5791.15Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV
        L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDV
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV

Query:  FPSPFVEEIKKEL
        F SPFVEEIKKEL
Subjt:  FPSPFVEEIKKEL

A0A5A7V0L3 Cyclic nucleotide-gated ion channel 1-like isoform X13.12e-5490.35Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQV-YLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLD
        L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQV YLQSSTLRSEEKRRTM+KKD EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLD
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQV-YLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLD

Query:  VFPSPFVEEIKKEL
        VF SPFVEEIKKEL
Subjt:  VFPSPFVEEIKKEL

A0A5D3DCD7 Cyclic nucleotide-gated ion channel 1-like isoform X23.44e-5187.61Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV
        L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQ    SSTLRSEEKRRTM+KKD EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDV
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV

Query:  FPSPFVEEIKKEL
        F SPFVEEIKKEL
Subjt:  FPSPFVEEIKKEL

A0A5D3E6K4 Cyclic nucleotide-gated ion channel 1-like isoform X11.35e-5590.27Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV
        L SFGSNLTTSS + ENIFAAL+TI+GILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKK  EIDFWIDYY+FQKKKEIKEFV DKFEW+NDVNLKTLLDV
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDV

Query:  FPSPFVEEIKKEL
        FPSPFVEEIKKEL
Subjt:  FPSPFVEEIKKEL

SwissProt top hitse value%identityAlignment
O65717 Cyclic nucleotide-gated ion channel 11.8e-0736.52Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL
        L S G NL TS+   E  FA  I+I G++L  +LIGN+Q YLQS+T R EE R  +K++D E   W+ +    +  +K I+ + + K++    V+ + LL
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL

Query:  DVFPSPFVEEIKKEL
           P     +IK+ L
Subjt:  DVFPSPFVEEIKKEL

Q8L7Z0 Cyclic nucleotide-gated ion channel 176.3e-0837.61Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVR--DKFEW--KNDVNLKT
        L S+G NL+T+    E  FA LI I G++L  +LIGN+Q YLQS T+R EE R  +KK+D E   W+ +   Q  +E++  VR  ++++W     V+ + 
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVR--DKFEW--KNDVNLKT

Query:  LLDVFPSPFVEEIKKEL
        LL   P+    +I++ L
Subjt:  LLDVFPSPFVEEIKKEL

Q9LNJ0 Probable cyclic nucleotide-gated ion channel 107.0e-0735.65Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL
        L + G NL TS    E IFA  I I G++L   LIGN+Q YL+S+T+R EE R  ++K+D E   W+ +    +  +K I+ + + +++    V  +TLL
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL

Query:  DVFPSPFVEEIKKEL
           P     +IK+ L
Subjt:  DVFPSPFVEEIKKEL

Q9SJA4 Probable cyclic nucleotide-gated ion channel 149.8e-0936.52Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL
        L S+G NL+TS+S  E +FA L+ I G++L   LIGN+Q YLQS T+R EE R  +K++D E   W+ +    +  ++ ++ FV+ K+     V+ +T+L
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL

Query:  DVFPSPFVEEIKKEL
           P+    +I++ L
Subjt:  DVFPSPFVEEIKKEL

Q9SKD7 Probable cyclic nucleotide-gated ion channel 38.3e-0836.52Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLL
        L + G NL TS+   E IFA +I I G++L   LIGN+Q YLQS+T+R EE R  +K++D E   W+ +       +K I+++ + K++    V  + LL
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLL

Query:  DVFPSPFVEEIKKEL
           P    ++IK+ L
Subjt:  DVFPSPFVEEIKKEL

Arabidopsis top hitse value%identityAlignment
AT2G24610.1 cyclic nucleotide-gated channel 146.9e-1036.52Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL
        L S+G NL+TS+S  E +FA L+ I G++L   LIGN+Q YLQS T+R EE R  +K++D E   W+ +    +  ++ ++ FV+ K+     V+ +T+L
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL

Query:  DVFPSPFVEEIKKEL
           P+    +I++ L
Subjt:  DVFPSPFVEEIKKEL

AT2G46430.1 cyclic nucleotide gated channel 35.9e-0936.52Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLL
        L + G NL TS+   E IFA +I I G++L   LIGN+Q YLQS+T+R EE R  +K++D E   W+ +       +K I+++ + K++    V  + LL
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLL

Query:  DVFPSPFVEEIKKEL
           P    ++IK+ L
Subjt:  DVFPSPFVEEIKKEL

AT2G46430.2 cyclic nucleotide gated channel 35.9e-0936.52Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLL
        L + G NL TS+   E IFA +I I G++L   LIGN+Q YLQS+T+R EE R  +K++D E   W+ +       +K I+++ + K++    V  + LL
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLL

Query:  DVFPSPFVEEIKKEL
           P    ++IK+ L
Subjt:  DVFPSPFVEEIKKEL

AT4G30360.1 cyclic nucleotide-gated channel 174.5e-0937.61Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVR--DKFEW--KNDVNLKT
        L S+G NL+T+    E  FA LI I G++L  +LIGN+Q YLQS T+R EE R  +KK+D E   W+ +   Q  +E++  VR  ++++W     V+ + 
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVR--DKFEW--KNDVNLKT

Query:  LLDVFPSPFVEEIKKEL
        LL   P+    +I++ L
Subjt:  LLDVFPSPFVEEIKKEL

AT5G53130.1 cyclic nucleotide gated channel 11.3e-0836.52Show/hide
Query:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL
        L S G NL TS+   E  FA  I+I G++L  +LIGN+Q YLQS+T R EE R  +K++D E   W+ +    +  +K I+ + + K++    V+ + LL
Subjt:  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLL

Query:  DVFPSPFVEEIKKEL
           P     +IK+ L
Subjt:  DVFPSPFVEEIKKEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAACTTGGCCGATGGAATATCTAGAGGATTGTTCTCATCATTTTTATGCTCATTTGGGTCAAACCTGACTACAAGTAGCAGTTCATCTGAAAACATCTTTGCGGC
TCTCATTACCATTATTGGGATCCTTCTAGTTGTTTATCTTATCGGCAACTTGCAGGTATATCTGCAGTCCTCAACTTTAAGATCAGAGGAGAAACGGAGGACGATGAAAA
AGAAAGATGGTGAAATAGATTTCTGGATAGATTATTATGAGTTTCAGAAGAAGAAGGAAATCAAGGAGTTTGTGAGAGACAAGTTTGAGTGGAAAAATGATGTCAATTTG
AAAACACTGCTCGACGTGTTTCCGTCTCCATTCGTTGAGGAGATAAAGAAAGAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACAACTTGGCCGATGGAATATCTAGAGGATTGTTCTCATCATTTTTATGCTCATTTGGGTCAAACCTGACTACAAGTAGCAGTTCATCTGAAAACATCTTTGCGGC
TCTCATTACCATTATTGGGATCCTTCTAGTTGTTTATCTTATCGGCAACTTGCAGGTATATCTGCAGTCCTCAACTTTAAGATCAGAGGAGAAACGGAGGACGATGAAAA
AGAAAGATGGTGAAATAGATTTCTGGATAGATTATTATGAGTTTCAGAAGAAGAAGGAAATCAAGGAGTTTGTGAGAGACAAGTTTGAGTGGAAAAATGATGTCAATTTG
AAAACACTGCTCGACGTGTTTCCGTCTCCATTCGTTGAGGAGATAAAGAAAGAACTTTGA
Protein sequenceShow/hide protein sequence
MYNLADGISRGLFSSFLCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNL
KTLLDVFPSPFVEEIKKEL