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CsGy3G025175 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G025175
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionMediator of RNA polymerase II transcription subunit 8 isoform X2
Genome locationGy14Chr3:25557671..25557967
RNA-Seq ExpressionCsGy3G025175
SyntenyCsGy3G025175
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]3.70e-0648.28Show/hide
Query:  MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA
        ++QL+ G  L    R+IW  L KALL E+W ERNQRI  DK R   +I ++   NAAA
Subjt:  MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA

KAA0068192.1 mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis melo var. makuwa]1.42e-1062.96Show/hide
Query:  QLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNA
        +L EGPPL  K RLIWLNL KALL+ELWFERNQ I   KE+  L+I  S + NA
Subjt:  QLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNA

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]3.67e-0648.28Show/hide
Query:  MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA
        ++QL+ G  L    R+IW  L KALL E+W ERNQRI  DK R   +I ++   NAAA
Subjt:  MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]4.02e-0657.14Show/hide
Query:  QLVEGPP-LHYKRRLIWLNLLKALLAELWFERNQRISQDKER
        QL+ GPP L    R +WLN++KALL+ELWFERN R+ ++K R
Subjt:  QLVEGPP-LHYKRRLIWLNLLKALLAELWFERNQRISQDKER

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]1.72e-0557.14Show/hide
Query:  QLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERS
        QL+  P  H   RL+W N +KALLA+LWFERNQRI  +K  S
Subjt:  QLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERS

TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein1.79e-0648.28Show/hide
Query:  MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA
        ++QL+ G  L    R+IW  L KALL E+W ERNQRI  DK R   +I ++   NAAA
Subjt:  MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA

A0A5A7TN98 Uncharacterized protein5.57e-0544.23Show/hide
Query:  EGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAA
         GP L   RR++W N+ KA+LAE+WFER  RI  DK R   +  ++ + N A
Subjt:  EGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAA

A0A5D3DC06 Mediator of RNA polymerase II transcription subunit 8 isoform X26.90e-1162.96Show/hide
Query:  QLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNA
        +L EGPPL  K RLIWLNL KALL+ELWFERNQ I   KE+  L+I  S + NA
Subjt:  QLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNA

A0A5D3DE60 zf-RVT domain-containing protein1.78e-0648.28Show/hide
Query:  MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA
        ++QL+ G  L    R+IW  L KALL E+W ERNQRI  DK R   +I ++   NAAA
Subjt:  MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA

A0A6J1DIE2 uncharacterized protein LOC1110207651.95e-0657.14Show/hide
Query:  QLVEGPP-LHYKRRLIWLNLLKALLAELWFERNQRISQDKER
        QL+ GPP L    R +WLN++KALL+ELWFERN R+ ++K R
Subjt:  QLVEGPP-LHYKRRLIWLNLLKALLAELWFERNQRISQDKER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTAGTGGAGGGTCCACCTCTACATTATAAGCGTCGACTGATTTGGTTAAATCTATTAAAAGCTCTTTTAGCGGAATTGTGGTTTGAGCGTAATCAGCGGAT
CTCTCAAGACAAGGAAAGATCAAGCCTAAAAATTTACAATTCAATGCAATGTAATGCAGCAGCTTGA
mRNA sequenceShow/hide mRNA sequence
CCCTTTCCCTCTATTTGTTGGAATAGTTTCCTCTCCATCTTTTATATTGCTTGGGTATTCGACGCCTTCCTCAGCTCCTCGATGCTTCAGCTAGTGGAGGGTCCACCTCT
ACATTATAAGCGTCGACTGATTTGGTTAAATCTATTAAAAGCTCTTTTAGCGGAATTGTGGTTTGAGCGTAATCAGCGGATCTCTCAAGACAAGGAAAGATCAAGCCTAA
AAATTTACAATTCAATGCAATGTAATGCAGCAGCTTGATGCTCTCTAAACAAGATTTTTGCAAATTACTCCACTCAA
Protein sequenceShow/hide protein sequence
MLQLVEGPPLHYKRRLIWLNLLKALLAELWFERNQRISQDKERSSLKIYNSMQCNAAA