CuGenDBv2

Gene ID	CsGy3G025260
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein LOW PSII ACCUMULATION 1, chloroplastic
Genome location	Gy14Chr3:25708227..25713582
RNA-Seq Expression	CsGy3G025260
Synteny	CsGy3G025260
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021883 - Protein LOW PSII ACCUMULATION 1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152010.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis sativus]

1.84e-241

100

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Query:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
        LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_008447350.1 PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis melo]

4.37e-224

93.79

Show/hide

Query:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSL T  +SSFNNIAPPPHFSPTPSHNA DFKF RRS   VHRKTVSFSSSPRLPVSLRF VYGRRNLAN+I SAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPIS LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
        LVICAGPESF+IEAFKSSEPFTE+LLERGVLVVPLATDVTTLNFEFD+REEVKDIT+KRK+LWRLTPVYMTEWSAWLDEQKKLAGV+SDSPVYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_022131239.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia]

1.31e-197

85.15

Show/hide

Query:  SISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF
        +ISSFNN  PPPH   T SHNA +FKF R   CRVH KTV FSS P L  SLR L   RRNLANF CSAA+KPEISSTAKIRSEVLSPFRSVRMFFYLTF
Subjt:  SISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF

Query:  IASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPE
        IASGTLGGLIATTQLL ALANSSRA++VPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+  LRGIARLVICAGPE
Subjt:  IASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPE

Query:  SFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVG
        SFI+EAF+SSEPFTE+LLERGV+VVP ATDV++LNFEFD+RE++KD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGV+++SPVYLSLRMDGRVRGSGVG
Subjt:  SFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVG

Query:  YPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        YPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  YPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_022963501.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata]

4.38e-195

84.8

Show/hide

Query:  ISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFI
        I S NN   PPH S T SHNA + KF RR  C VHR  VSF+  P +  SLR+L Y RRNLA+  CSA+DKPEISSTAKIRSEVLSPFRSVRMFFYLTFI
Subjt:  ISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFI

Query:  ASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPES
        ASGTLGGLIATTQLL ALANSSRA+EVPDIL GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI IS LRGIARLVICAGPES
Subjt:  ASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPES

Query:  FIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGY
        FI+EAFK+SEPFTERLLERGVLV+P ATD ++LNFEFD+REE+KDITTKRKRLWRLTPVYM++WSAWLD+QKKLAGV+SDSPVYLSLRMDGRVRGSGVGY
Subjt:  FIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGY

Query:  PPWNALVAQLPPVKGLWSGLLDGMDGRVL
        PPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  PPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_038888898.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Benincasa hispida]

5.62e-212

90.24

Show/hide

Query:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSL TP+ISS NNI  PPHFS T     SDFKFRRR  C VHRKT+SF+SSP LP SL  L Y RRNLANF CSAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR
        RMFFYLTFIASGTLGGLIATTQLL ALANSSRA+EVPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPIS LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
        LVICAGPESFI+EAFKSSEPFTERLLERGVLVVPLATDV+TLNFEFD+REEVKD+TTKRKRLWRLTPVYMTEWSAWLDEQKKLAGV+SDSPVYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L902 Uncharacterized protein

8.91e-242

100

Show/hide

Query:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
        LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A1S3BHU5 protein LOW PSII ACCUMULATION 1, chloroplastic

2.12e-224

93.79

Show/hide

Query:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSL T  +SSFNNIAPPPHFSPTPSHNA DFKF RRS   VHRKTVSFSSSPRLPVSLRF VYGRRNLAN+I SAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPIS LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
        LVICAGPESF+IEAFKSSEPFTE+LLERGVLVVPLATDVTTLNFEFD+REEVKDIT+KRK+LWRLTPVYMTEWSAWLDEQKKLAGV+SDSPVYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A5D3BG35 Protein LOW PSII ACCUMULATION 1

2.12e-224

93.79

Show/hide

Query:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSL T  +SSFNNIAPPPHFSPTPSHNA DFKF RRS   VHRKTVSFSSSPRLPVSLRF VYGRRNLAN+I SAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPIS LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
        LVICAGPESF+IEAFKSSEPFTE+LLERGVLVVPLATDVTTLNFEFD+REEVKDIT+KRK+LWRLTPVYMTEWSAWLDEQKKLAGV+SDSPVYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1BP58 protein LOW PSII ACCUMULATION 1, chloroplastic

6.34e-198

85.15

Show/hide

Query:  SISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF
        +ISSFNN  PPPH   T SHNA +FKF R   CRVH KTV FSS P L  SLR L   RRNLANF CSAA+KPEISSTAKIRSEVLSPFRSVRMFFYLTF
Subjt:  SISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF

Query:  IASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPE
        IASGTLGGLIATTQLL ALANSSRA++VPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+  LRGIARLVICAGPE
Subjt:  IASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPE

Query:  SFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVG
        SFI+EAF+SSEPFTE+LLERGV+VVP ATDV++LNFEFD+RE++KD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGV+++SPVYLSLRMDGRVRGSGVG
Subjt:  SFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVG

Query:  YPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        YPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  YPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1HGA1 protein LOW PSII ACCUMULATION 1, chloroplastic

2.12e-195

84.8

Show/hide

Query:  ISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFI
        I S NN   PPH S T SHNA + KF RR  C VHR  VSF+  P +  SLR+L Y RRNLA+  CSA+DKPEISSTAKIRSEVLSPFRSVRMFFYLTFI
Subjt:  ISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFI

Query:  ASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPES
        ASGTLGGLIATTQLL ALANSSRA+EVPDIL GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI IS LRGIARLVICAGPES
Subjt:  ASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPES

Query:  FIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGY
        FI+EAFK+SEPFTERLLERGVLV+P ATD ++LNFEFD+REE+KDITTKRKRLWRLTPVYM++WSAWLD+QKKLAGV+SDSPVYLSLRMDGRVRGSGVGY
Subjt:  FIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGY

Query:  PPWNALVAQLPPVKGLWSGLLDGMDGRVL
        PPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  PPWNALVAQLPPVKGLWSGLLDGMDGRVL

SwissProt top hits

e value

%identity

Alignment

Q9SRY4 Protein LOW PSII ACCUMULATION 1, chloroplastic

2.4e-30

31.72

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLG---VDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRV
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+      D  P++LE  G   ++ G + +   L+  EN  +  Q+ +++R+E+LS L LR+
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLG---VDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRV

Query:  DQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLNFEFDDREE--VKDITTKRKR
          N+V+ +  LR   R VI AG +  +  A + ++ F   LL RGVL+VP+                     AT + ++  +FD R +  V     K + 
Subjt:  DQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLNFEFDDREE--VKDITTKRKR

Query:  LWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
         ++   V   EW  W+ +Q+   GV     VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

Arabidopsis top hits

e value

%identity

Alignment

AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein

1.7e-31

31.72

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLG---VDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRV
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+      D  P++LE  G   ++ G + +   L+  EN  +  Q+ +++R+E+LS L LR+
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLG---VDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRV

Query:  DQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLNFEFDDREE--VKDITTKRKR
          N+V+ +  LR   R VI AG +  +  A + ++ F   LL RGVL+VP+                     AT + ++  +FD R +  V     K + 
Subjt:  DQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLNFEFDDREE--VKDITTKRKR

Query:  LWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
         ++   V   EW  W+ +Q+   GV     VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

AT4G28740.1 FUNCTIONS IN: molecular_function unknown

5.9e-101

60.25

Show/hide

Query:  HFSPTPSHNASDFKFRRRSYCRVHRKTVSFS-SSPRLPVSLRFLVYGRRNLA-NFICSAADKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGL
        H S    + A +    RR     HR+ + FS  + RL ++ +     ++ L+ N +C AAD+P EIS+ A+IRSEVLSPFRSVRMFFYL FIASG+LGGL
Subjt:  HFSPTPSHNASDFKFRRRSYCRVHRKTVSFS-SSPRLPVSLRFLVYGRRNLA-NFICSAADKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGL

Query:  IATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISILRGIARLVICAGPESFIIEAFK
        IAT++L+GALAN +R+ EV +I++GLGVD GA +LFAFLYF EN  KNAQ+ARLSREE+L  LK+RV++ NKVI +  LRG+ARLVICAGP  FI EAFK
Subjt:  IATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISILRGIARLVICAGPESFIIEAFK

Query:  SSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEV-KDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNAL
         S+ +T+ L+ERGV+VV  ATD  +   EFD+ +   ++++ +RK+LWR+TPV++ EW  WL+EQKKLA V+SDSPVYLSLR+DGRVR SGVGYPPW A 
Subjt:  SSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEV-KDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNAL

Query:  VAQLPPVKGLWSGLLDGMDGRV
        VAQLPPVKG+W+GLLDGMDGRV
Subjt:  VAQLPPVKGLWSGLLDGMDGRV

Sequences

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CDS sequence

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ATGGCGGTTTCCCTTTTCACTCCCAGCATTTCTTCCTTCAACAACATTGCTCCACCTCCTCATTTCTCTCCGACGCCCTCCCATAACGCTTCGGATTTCAAATTC
CGCCGCCGCAGCTACTGCCGTGTTCATCGAAAGACGGTATCATTTAGTTCTAGCCCTAGGCTACCAGTTTCGCTTCGTTTTCTTGTTTACGGCAGACGGAATTTG
GCTAACTTCATTTGCTCGGCTGCTGATAAACCGGAAATCAGTTCCACAGCCAAGATAAGAAGTGAAGTTCTGTCTCCATTTCGGTCTGTTCGGATGTTCTTTTAT
CTCACTTTCATTGCTAGTGGTACATTGGGAGGACTGATAGCAACCACTCAATTGCTTGGTGCATTGGCAAACTCATCAAGAGCTGACGAAGTCCCTGATATTCTA
GAAGGACTTGGAGTAGATTTCGGAGCCGTAGCTCTTTTTGCTTTTCTTTATTTCAGAGAAAACAATGCAAAAAATGCTCAATTGGCTAGACTGTCAAGAGAAGAA
AGCCTTTCCAACTTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCCATCAGCATTTTGCGTGGGATTGCTCGTCTGGTAATTTGTGCTGGCCCTGAATCCTTT
ATCATTGAAGCTTTTAAATCAAGTGAGCCTTTCACTGAACGACTTCTAGAACGGGGTGTTTTAGTCGTACCTCTTGCCACAGATGTCACTACACTGAATTTTGAG
TTTGATGACCGTGAAGAGGTGAAGGATATAACCACAAAAAGGAAAAGACTGTGGCGCTTGACTCCAGTTTACATGACTGAGTGGTCAGCGTGGTTAGATGAACAA
AAGAAGTTGGCTGGAGTCACCTCTGATTCTCCTGTGTATCTATCTCTGCGAATGGATGGCCGTGTTCGTGGTAGTGGTGTTGGCTATCCTCCATGGAATGCTCTT
GTAGCACAATTACCACCTGTAAAAGGACTATGGTCAGGTCTTCTAGATGGGATGGATGGGAGAGTTCTTTGA

mRNA sequence

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GTAGTTAGAAATAATTTCCTTGTCTTCTTCATCTTTTGTTTATGGTGGCGACAAATTCTGGGTATCGTGGCGGCATCGACACCATCCCTCGAAATTTGCTTCCAT
TAACAAACTCTGAATCTACCCCACAATGTCAATTCTCAGTTTCTTGAGTTCTCAATCATGGCGGTTTCCCTTTTCACTCCCAGCATTTCTTCCTTCAACAACATT
GCTCCACCTCCTCATTTCTCTCCGACGCCCTCCCATAACGCTTCGGATTTCAAATTCCGCCGCCGCAGCTACTGCCGTGTTCATCGAAAGACGGTATCATTTAGT
TCTAGCCCTAGGCTACCAGTTTCGCTTCGTTTTCTTGTTTACGGCAGACGGAATTTGGCTAACTTCATTTGCTCGGCTGCTGATAAACCGGAAATCAGTTCCACA
GCCAAGATAAGAAGTGAAGTTCTGTCTCCATTTCGGTCTGTTCGGATGTTCTTTTATCTCACTTTCATTGCTAGTGGTACATTGGGAGGACTGATAGCAACCACT
CAATTGCTTGGTGCATTGGCAAACTCATCAAGAGCTGACGAAGTCCCTGATATTCTAGAAGGACTTGGAGTAGATTTCGGAGCCGTAGCTCTTTTTGCTTTTCTT
TATTTCAGAGAAAACAATGCAAAAAATGCTCAATTGGCTAGACTGTCAAGAGAAGAAAGCCTTTCCAACTTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCC
ATCAGCATTTTGCGTGGGATTGCTCGTCTGGTAATTTGTGCTGGCCCTGAATCCTTTATCATTGAAGCTTTTAAATCAAGTGAGCCTTTCACTGAACGACTTCTA
GAACGGGGTGTTTTAGTCGTACCTCTTGCCACAGATGTCACTACACTGAATTTTGAGTTTGATGACCGTGAAGAGGTGAAGGATATAACCACAAAAAGGAAAAGA
CTGTGGCGCTTGACTCCAGTTTACATGACTGAGTGGTCAGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCACCTCTGATTCTCCTGTGTATCTATCTCTG
CGAATGGATGGCCGTGTTCGTGGTAGTGGTGTTGGCTATCCTCCATGGAATGCTCTTGTAGCACAATTACCACCTGTAAAAGGACTATGGTCAGGTCTTCTAGAT
GGGATGGATGGGAGAGTTCTTTGAAGAAAAACAGCTCCTCCTCTTCCAAGTACTCTGAAATTAAGTCCTTAACATGGAGTGGACTAAAGTTTGGGTACCATCTTT
AAACTATCAAAGAAACTTCCACTTCAAAAGCTCTAACACCATTGTTAAGCTGGACTGCCTGAGAAAAATACAGGTTTTTGTAAAGAGTTAAAAGGAGAGATTTTG
CTTATCCATCATAAATCTGATTCGAACACTATTAGTTATTAGTTATTTTTGCTCCAGCAATGTGGTTGTATGGGTGCAATTTGTTAATAGTTAGTTGAATGTGTA
TTTGTAAAGCAATTATACATGGAACAAGATGTAAATAACTATGCGCTTCTTTGTTTCCCTTTGGCCCTGTTTGGGCATCAACTAAACTAAAAGTTAGTGCAGTGG
GTTATCACAGCTCACTCTATATTTTTGTACCAATTATAATAACGGTGTGTATAACTGCTATTTCAAAGCCCTTGTTTTGACAGTATCTATTATTTGTTTCTG

Protein sequence

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MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFY
LTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPESF
IIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNAL
VAQLPPVKGLWSGLLDGMDGRVL

CsGy3G025260 (gene) of Cucumber (Gy14) v2.1 genome