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CsGy3G025380 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G025380
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionC2H2-type domain-containing protein
Genome locationGy14Chr3:25917755..25918288
RNA-Seq ExpressionCsGy3G025380
SyntenyCsGy3G025380
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066236.1 protein LATE FLOWERING-like [Cucumis melo var. makuwa]7.46e-10396.71Show/hide
Query:  MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLY
        MEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLY
Subjt:  MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        ENMVFCGGVC SNRYHQDEENLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  ENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

KAE8650843.1 hypothetical protein Csa_017433, partial [Cucumis sativus]7.45e-83100Show/hide
Query:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL
        MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL
Subjt:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL

Query:  LPHPVYIATHGANLHCFPNNQQL
        LPHPVYIATHGANLHCFPNNQQL
Subjt:  LPHPVYIATHGANLHCFPNNQQL

XP_008447640.1 PREDICTED: protein LATE FLOWERING-like [Cucumis melo]8.93e-11995.51Show/hide
Query:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-G
        MEYEESLSKVVEIETN+N+IVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP G
Subjt:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-G

Query:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVC SNRYHQDEENLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

XP_031739318.1 protein LATE FLOWERING [Cucumis sativus]2.04e-126100Show/hide
Query:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL
        MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL
Subjt:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL

Query:  LPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        LPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
Subjt:  LPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

XP_038888938.1 protein LATE FLOWERING [Benincasa hispida]2.33e-10083.61Show/hide
Query:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSV---SPPSPFPAPTSLVFAASQQQHH
        MEYEE LS+V E  TN+N     +VEMEE P+RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DYS    SPPSPFPAP SLVF AS QQHH
Subjt:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSV---SPPSPFPAPTSLVFAASQQQHH

Query:  PGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQ---DEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        PGLLP PVYIATHG NLHCFPNNQQLLYENMV+CGGVC SNRYHQ   DEENLLNWER+IKKDLSRINHDKEKEQKLDLSLHL
Subjt:  PGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQ---DEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

TrEMBL top hitse value%identityAlignment
A0A0A0LE19 C2H2-type domain-containing protein7.96e-109100Show/hide
Query:  MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYE
        MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYE
Subjt:  MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYE

Query:  NMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        NMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
Subjt:  NMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

A0A1S3BIU8 protein LATE FLOWERING-like4.32e-11995.51Show/hide
Query:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-G
        MEYEESLSKVVEIETN+N+IVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP G
Subjt:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-G

Query:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVC SNRYHQDEENLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

A0A5A7VIQ7 Protein LATE FLOWERING-like3.61e-10396.71Show/hide
Query:  MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLY
        MEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLY
Subjt:  MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        ENMVFCGGVC SNRYHQDEENLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  ENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

A0A6J1ETH7 protein LATE FLOWERING6.22e-6766.46Show/hide
Query:  VEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLL
        VEMEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKR+ DYS S  S   +    VFA +QQ HHP +LPHPVYIA HGANLHCFPNNQQ+ 
Subjt:  VEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLL

Query:  Y---------ENMVFCGGVCPSNRYH--QDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        Y         E+MV+ GGVC  NRY   +DE+++LNW+R+IKK       DKEKEQKLDLSLHL
Subjt:  Y---------ENMVFCGGVCPSNRYH--QDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

A0A6J1HVN7 protein LATE FLOWERING-like1.64e-6564.91Show/hide
Query:  NDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSP-PSPFPAPTSLVFAASQQQ-HHPGLLPHPVYIATHGAN
        ++ N +     MEE PSR+FPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY+ S  PSP  + +S VFAA+  Q HHPGL PHP+YIA   AN
Subjt:  NDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSP-PSPFPAPTSLVFAASQQQ-HHPGLLPHPVYIATHGAN

Query:  LHCFPNNQQLLYENMVFCGGVCPSNRYH-------QDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        LHCFPNN  L YE+M + GGVC SNRYH       +DE+N+LNW+RNIK       +DK+KEQKLDLSLHL
Subjt:  LHCFPNNQQLLYENMVFCGGVCPSNRYH-------QDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 23.9e-0844.44Show/hide
Query:  SLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS
        S+S      TN ++ +E+         RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +   S +  S  P P S
Subjt:  SLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS

Q39263 Zinc finger protein 41.7e-0846.15Show/hide
Query:  SLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        SL+  +   +  +N  ++  +      RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  SLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

Q39266 Zinc finger protein 71.3e-0848Show/hide
Query:  EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPH
        EA  RVF C +C RKF SSQALGGHQNAHK+ERT A++A  +         P+   +S    +   Q H GLL H
Subjt:  EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPH

Q9FFX4 Zinc finger protein KNUCKLES2.3e-0870.27Show/hide
Query:  APSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        A  R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  APSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

Q9FKA9 Protein LATE FLOWERING6.4e-1937.89Show/hide
Query:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL
        +E EE +    E    D N          +  R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +       P   VF +S  QHH  +
Subjt:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL

Query:  LPHPVYIATHGANLHCFPNNQQLLYENMVF-------------CGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        L +P       A++ CFP       ++ +F              G  C      Q   ++L+   N+      +N DK K+Q LDLSLHL
Subjt:  LPHPVYIATHGANLHCFPNNQQLLYENMVF-------------CGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 79.5e-1048Show/hide
Query:  EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPH
        EA  RVF C +C RKF SSQALGGHQNAHK+ERT A++A  +         P+   +S    +   Q H GLL H
Subjt:  EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPH

AT1G66140.1 zinc finger protein 41.2e-0946.15Show/hide
Query:  SLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        SL+  +   +  +N  ++  +      RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  SLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein5.0e-1147.44Show/hide
Query:  EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-CDY-SVSPPSPFPAPTSLVFAASQQQHHPGLLPHP
        EA +RVF C FC ++F +SQALGGHQNAHK+ER+ A++ K I  +Y  +S  S +P P+ L F++S  Q+  G+  +P
Subjt:  EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-CDY-SVSPPSPFPAPTSLVFAASQQQHHPGLLPHP

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein1.6e-0970.27Show/hide
Query:  APSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        A  R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  APSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

AT5G48890.1 C2H2-like zinc finger protein4.6e-2037.89Show/hide
Query:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL
        +E EE +    E    D N          +  R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +       P   VF +S  QHH  +
Subjt:  MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGL

Query:  LPHPVYIATHGANLHCFPNNQQLLYENMVF-------------CGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL
        L +P       A++ CFP       ++ +F              G  C      Q   ++L+   N+      +N DK K+Q LDLSLHL
Subjt:  LPHPVYIATHGANLHCFPNNQQLLYENMVF-------------CGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGAAGAAAGCCTTTCAAAAGTAGTTGAAATTGAAACCAACGACAACAATATTGTTGAAAAAGTAGTTGAAATGGAAGAAGCCCCATCAAGAGTTTTCCCCTG
TTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCAAGGAAAGCCAAGCGAATCTGCGATTACT
CGGTGTCACCACCATCACCGTTCCCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACTCAT
GGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTCCAAGCAATAGATATCATCAAGATGAAGAAAATTT
GTTGAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTCTCTCTCCATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATATGAAGAAAGCCTTTCAAAAGTAGTTGAAATTGAAACCAACGACAACAATATTGTTGAAAAAGTAGTTGAAATGGAAGAAGCCCCATCAAGAGTTTTCCCCTG
TTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCAAGGAAAGCCAAGCGAATCTGCGATTACT
CGGTGTCACCACCATCACCGTTCCCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACTCAT
GGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTCCAAGCAATAGATATCATCAAGATGAAGAAAATTT
GTTGAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTCTCTCTCCATTTATAG
Protein sequenceShow/hide protein sequence
MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATH
GANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL