; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G025710 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G025710
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationGy14Chr3:26437205..26439453
RNA-Seq ExpressionCsGy3G025710
SyntenyCsGy3G025710
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53863.2 hypothetical protein Csa_019174 [Cucumis sativus]1.15e-7289.55Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGK
        SIDEIMASICSDRRKKPGKR +EKVD  YKKN K
Subjt:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGK

XP_008450999.1 PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo]1.65e-7193.55Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI
        MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKI
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRSRE
        LSIDEIMASICSDRRKKPGKR R+
Subjt:  LSIDEIMASICSDRRKKPGKRSRE

XP_008460383.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo]7.24e-7290.55Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLR IGFVLMEHLKG+LRTSDV+DLSQS  NACNLLDSNLEK L
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRSREKVDL
         IDEIM SIC DRRKKPGKR REKVD 
Subjt:  SIDEIMASICSDRRKKPGKRSREKVDL

XP_011651663.2 uncharacterized protein LOC101210446 [Cucumis sativus]5.27e-86100Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGKS
        SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGKS
Subjt:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGKS

XP_011653427.1 uncharacterized protein LOC105435221 [Cucumis sativus]1.44e-7489.55Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGK
        SIDEIMASICSDRRKKPGKR +EKVD  YKKN K
Subjt:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGK

TrEMBL top hitse value%identityAlignment
A0A0A0KW48 Uncharacterized protein2.21e-7289.55Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGK
        SIDEIMASICSDRRKKPGKR +EKVD  YKKN K
Subjt:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGK

A0A0A0LBP9 Uncharacterized protein1.73e-8398.52Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGKS
        SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGKS
Subjt:  SIDEIMASICSDRRKKPGKRSREKVDLSYKKNGKS

A0A1S3BQH9 uncharacterized protein LOC1034924137.98e-7293.55Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI
        MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKI
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRSRE
        LSIDEIMASICSDRRKKPGKR R+
Subjt:  LSIDEIMASICSDRRKKPGKRSRE

A0A1S3CBX7 uncharacterized protein LOC1034992203.50e-7290.55Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLR IGFVLMEHLKG+LRTSDV+DLSQS  NACNLLDSNLEK L
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRSREKVDL
         IDEIM SIC DRRKKPGKR REKVD 
Subjt:  SIDEIMASICSDRRKKPGKRSREKVDL

A0A5A7UQA1 Uncharacterized protein1.56e-7092.74Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI
        MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKI
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRSRE
        LSIDEIMASICSDRRKKPGKR ++
Subjt:  LSIDEIMASICSDRRKKPGKRSRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component6.5e-2747.66Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS
        MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDL+ LR++G VLMEH   + R  + + L+ S        + CNLL +
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKRSR
        +++  + I+EI+  IC ++ KK  ++ R
Subjt:  NLEKILSIDEIMASICSDRRKKPGKRSR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component6.5e-2747.66Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS
        MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDL+ LR++G VLMEH   + R  + + L+ S        + CNLL +
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKRSR
        +++  + I+EI+  IC ++ KK  ++ R
Subjt:  NLEKILSIDEIMASICSDRRKKPGKRSR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component6.5e-2747.66Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS
        MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDL+ LR++G VLMEH   + R  + + L+ S        + CNLL +
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKRSR
        +++  + I+EI+  IC ++ KK  ++ R
Subjt:  NLEKILSIDEIMASICSDRRKKPGKRSR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown2.7e-2550Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLRTLRAIGFVLMEHLKGK------LRTSDVSDLSQSTFNACNLLD
        MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDL+ LR++G VLME+++ +      L  S V +L  S  ++CNLL 
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLRTLRAIGFVLMEHLKGK------LRTSDVSDLSQSTFNACNLLD

Query:  SNLEKILSIDEIMASICSDR-RKKPGKRSR
        ++++  + I+EI+  IC+ + +KK  KRSR
Subjt:  SNLEKILSIDEIMASICSDR-RKKPGKRSR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown2.7e-2550Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLRTLRAIGFVLMEHLKGK------LRTSDVSDLSQSTFNACNLLD
        MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDL+ LR++G VLME+++ +      L  S V +L  S  ++CNLL 
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLRTLRAIGFVLMEHLKGK------LRTSDVSDLSQSTFNACNLLD

Query:  SNLEKILSIDEIMASICSDR-RKKPGKRSR
        ++++  + I+EI+  IC+ + +KK  KRSR
Subjt:  SNLEKILSIDEIMASICSDR-RKKPGKRSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAGAACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTA
GAACATCAGATGTTTCAGATCTATCTCAATCTACCTTTAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGC
TCAGACAGAAGGAAGAAACCAGGAAAAAGGTCGCGGGAAAAGGTTGATTTGAGTTACAAGAAGAACGGCAAGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAGAACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTA
GAACATCAGATGTTTCAGATCTATCTCAATCTACCTTTAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGC
TCAGACAGAAGGAAGAAACCAGGAAAAAGGTCGCGGGAAAAGGTTGATTTGAGTTACAAGAAGAACGGCAAGTCGTGA
Protein sequenceShow/hide protein sequence
MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKILSIDEIMASIC
SDRRKKPGKRSREKVDLSYKKNGKS