CuGenDBv2

Gene ID	CsGy3G026020
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	50S ribosomal protein L35
Genome location	Gy14Chr3:26779397..26785207
RNA-Seq Expression	CsGy3G026020
Synteny	CsGy3G026020
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR021137 - Ribosomal protein L35 IPR037229 - Ribosomal protein L35 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144409.1 uncharacterized protein LOC101219338 [Cucumis sativus]

4.33e-110

100

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

XP_008460439.1 PREDICTED: uncharacterized protein LOC103499252 [Cucumis melo]

5.68e-101

95.24

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR CAKLRSAAAKPSQI+ SVSSTRRIFHSAPSLYQPLHFS NNLNSRSLFNA  QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRRNKRKPTTPATS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC+
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]

4.21e-92

84.52

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR CAKLRSAAAKPSQ+++SVSSTRRIFHS+PSLYQPLHF+ NNL+SRS+FNAS QTHS LAAYQCIRSSPLPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAH KSK+SKR+LR+PA VPLAYAKVMKKLNFC 
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

XP_023532529.1 uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]

1.29e-86

81.55

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR C+KLRSAAAKPSQI++SVSSTRRIFHSAPSLYQPLHFS NNL+SRSL NAS QTHS LAAYQCIRSS  PL  VQVRHVSSR+R+ +RKP TP TS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTK+K YSSYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+PA VPLAYAKVMKKLNFC 
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

XP_038887770.1 uncharacterized protein LOC120077803 [Benincasa hispida]

1.37e-97

91.07

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR CAKLRSAAAKPSQI+NS SSTRRIFHS+ SLYQPLHFS NNLNSRSLFNASQQTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRR KRK TTP TS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLK YSSYKSRFW+MKDGSIKRRMEGKRHNAHSKSKRSKR+LR+PAIVPLAYAKVMKKLNFC 
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBT5 Uncharacterized protein

2.10e-110

100

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

A0A1S3CDR4 uncharacterized protein LOC103499252

2.75e-101

95.24

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR CAKLRSAAAKPSQI+ SVSSTRRIFHSAPSLYQPLHFS NNLNSRSLFNA  QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRRNKRKPTTPATS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC+
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

A0A6J1DPB8 uncharacterized protein LOC111023059

2.04e-92

84.52

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR CAKLRSAAAKPSQ+++SVSSTRRIFHS+PSLYQPLHF+ NNL+SRS+FNAS QTHS LAAYQCIRSSPLPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAH KSK+SKR+LR+PA VPLAYAKVMKKLNFC 
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

A0A6J1ESK5 uncharacterized protein LOC111437349

2.53e-86

80.95

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR C+KLRSAAAKPSQI++SVSSTRRIFHSAPSLYQPLHFS NNL+SRSL NAS QTHS LAAYQCIRSS  PL  VQVRHVSSR+R+ +RKP TP TS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTK+K YSSYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+P  VPLAYAKVMKKLNFC 
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

A0A6J1KAA4 uncharacterized protein LOC111491530

5.11e-86

80.95

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Query:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR C+KLRSAAAKPSQI++SVSSTRRIFHS PSLYQPLHFS NNL+SRSL NAS QTHS LAAYQCIRSS  PL  VQVRHVSSR+R+ +RKP TP TS
Subjt:  MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTK+K YSSYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+PA VPLAYAKVMKKLNFC 
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G45590.1 Ribosomal protein L35

1.5e-25

42.7

Show/hide

Query:  MLRCCAKLRSAAAKPSQILNSV-SSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAA-----YQCIRSSPLPLSVVQVRHVSSRDR----RN
        M R C KLRS + + ++ L+   +S  R+ H +PS     H ++  L      N+++ +  P A         + ++ +P   VQVR+++S+++    + 
Subjt:  MLRCCAKLRSAAAKPSQILNSV-SSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAA-----YQCIRSSPLPLSVVQVRHVSSRDR----RN

Query:  KRKPTTPATSKLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        K +P TP TSK+KK K+K YSS+K RF  + DG+I+R  EGKRHNAH KSK+SKR+LR+P +VP AYAKVMKKLNFC+
Subjt:  KRKPTTPATSKLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTCAGGTGCTGTGCCAAGCTCCGATCTGCGGCGGCGAAGCCATCTCAAATTTTAAATTCCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTA
TACCAGCCCCTCCATTTCTCTTCGAATAATTTGAATTCCAGGTCCCTTTTCAATGCATCTCAACAAACTCATTCTCCGCTCGCCGCTTACCAGTGTATTCGCTCT
TCGCCCTTGCCTCTCTCTGTTGTTCAAGTGCGGCATGTTTCATCAAGAGACCGGCGGAATAAGAGAAAGCCAACGACGCCAGCCACTTCCAAATTGAAGAAAACT
AAACTGAAAGCTTACTCGTCTTACAAGTCTAGGTTTTGGTTGATGAAGGATGGGAGCATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGTCT
AAAAGATCAAAGCGGAAACTGAGAAAACCTGCCATTGTCCCATTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGCAGTTAG

mRNA sequence

Show/hide mRNA sequence

CATAGGTTCCTCTCTCTGAAAAATTTTCCTTCGCCCTTGGACTACGACGACGACGACGATGCTCAGGTGCTGTGCCAAGCTCCGATCTGCGGCGGCGAAGCCATC
TCAAATTTTAAATTCCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTATACCAGCCCCTCCATTTCTCTTCGAATAATTTGAATTCCAGGTCCCT
TTTCAATGCATCTCAACAAACTCATTCTCCGCTCGCCGCTTACCAGTGTATTCGCTCTTCGCCCTTGCCTCTCTCTGTTGTTCAAGTGCGGCATGTTTCATCAAG
AGACCGGCGGAATAAGAGAAAGCCAACGACGCCAGCCACTTCCAAATTGAAGAAAACTAAACTGAAAGCTTACTCGTCTTACAAGTCTAGGTTTTGGTTGATGAA
GGATGGGAGCATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGTCTAAAAGATCAAAGCGGAAACTGAGAAAACCTGCCATTGTCCCATTAGC
TTATGCCAAGGTAATGAAGAAGCTCAACTTTTGCAGTTAGGTTATTTGGTTTGTTCCTTCTCTTGTACTATTATATGGATTGAACGAGCTTTAAACATCACCACT
CAACTGCTTCTTCTTTTTCCTTTTTTGGATTTAGAATTCAAAACTCTTAGAACAAACTAAGATGGACAATAATTATTTCTTTGTTATATGAAGTGATTATAGAGG
TTGTTGTGATTTCAAATAGAGGTTTATCTTTTTATTGTCATCAAGTGTGAATTTTTGGGGTTCTTACCGGAGCTGATATGTAATTAGAATTACTTCAGGGGTATG
AGAATGTTCGTGTAATTGGGAGCAGAATGGAAATGGAATTGTAAAACATTCCAGTTAGAAAAAGTATTATGAAAATATTTTTTTTAAAACAAAGTTAATTTAGTT
ATCTTTCAAGTAGTTGTAAGTAAATATGACCTGAG

Protein sequence

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MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFSSNNLNSRSLFNASQQTHSPLAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATSKLKKT
KLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

CsGy3G026020 (gene) of Cucumber (Gy14) v2.1 genome