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CsGy3G026835 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G026835
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationGy14Chr3:27868983..27869405
RNA-Seq ExpressionCsGy3G026835
SyntenyCsGy3G026835
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650907.1 hypothetical protein Csa_002672, partial [Cucumis sativus]1.00e-63100Show/hide
Query:  PTTPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL
        PTTPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL
Subjt:  PTTPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL

Query:  LRVKDRYEGFS
        LRVKDRYEGFS
Subjt:  LRVKDRYEGFS

XP_008463997.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]8.44e-5589.66Show/hide
Query:  LPTTPPPPPITP----PPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF
        LP  PPPPP  P    PPPSPSPPPFSP PPPPPHRHRR+PPPPLASS+ERKKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF
Subjt:  LPTTPPPPPITP----PPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF

Query:  KRRQLLRVKDRYEGFS
        KRRQLLRVKDRYEGFS
Subjt:  KRRQLLRVKDRYEGFS

XP_011651738.2 LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus]9.89e-61100Show/hide
Query:  PPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVK
        PPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVK
Subjt:  PPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVK

Query:  DRYEGFS
        DRYEGFS
Subjt:  DRYEGFS

XP_022998566.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]2.01e-2667.54Show/hide
Query:  PPPPITPPPPSP----SPPPFSPPPPPPPH-RHRRNP-PPPLASSVERKKKRPPVPPKNINTN-QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKR
        PPPPI  PPP P    SPPP  PPPP PP  +HR  P PPP+ +S +  KK P V   N + N +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKR
Subjt:  PPPPITPPPPSP----SPPPFSPPPPPPPH-RHRRNP-PPPLASSVERKKKRPPVPPKNINTN-QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKR

Query:  RQLLRVKDRYEGFS
        RQLLR KD+Y+GFS
Subjt:  RQLLRVKDRYEGFS

XP_038900729.1 proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]1.70e-3881.9Show/hide
Query:  PTTPPPPPITPPPP---SPSPPPFSPPPP-PPPHRHRRNPPPPLASSVERKKKRPPVPPKNIN-TNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF
        P  PPPPPI  PPP   SPSPPPFSPPPP P P   RR PPP  AS  E  KK PPVPPKNIN TNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF
Subjt:  PTTPPPPPITPPPP---SPSPPPFSPPPP-PPPHRHRRNPPPPLASSVERKKKRPPVPPKNIN-TNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF

Query:  KRRQLLRVKDRYEGFS
        KRRQLLRVKDRYEGFS
Subjt:  KRRQLLRVKDRYEGFS

TrEMBL top hitse value%identityAlignment
A0A0A0LC75 Uncharacterized protein5.85e-6298.2Show/hide
Query:  PTTPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL
        P  PPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL
Subjt:  PTTPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL

Query:  LRVKDRYEGFS
        LRVKDRYEGFS
Subjt:  LRVKDRYEGFS

A0A1S3CKG6 leucine-rich repeat extensin-like protein 34.09e-5589.66Show/hide
Query:  LPTTPPPPPITP----PPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF
        LP  PPPPP  P    PPPSPSPPPFSP PPPPPHRHRR+PPPPLASS+ERKKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF
Subjt:  LPTTPPPPPITP----PPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF

Query:  KRRQLLRVKDRYEGFS
        KRRQLLRVKDRYEGFS
Subjt:  KRRQLLRVKDRYEGFS

A0A6J1DGD7 proline-rich receptor-like protein kinase PERK92.49e-2262.93Show/hide
Query:  PTTPPPPPITPPPPSP-SPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVP---PKNINTNQGSKRS-LNKGKKVGLFFVGIAAVLQICVVGFLVF
        P+ PPP P +PP PSP SPPP SP  PPPP R R + PPP  +S  R +  P +     KN   NQ  KRS LNKGK+VGLFFVGIAAVLQ+CVVGFLVF
Subjt:  PTTPPPPPITPPPPSP-SPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVP---PKNINTNQGSKRS-LNKGKKVGLFFVGIAAVLQICVVGFLVF

Query:  KRRQLLRVKDRYEGFS
        KRRQLLR K++YE FS
Subjt:  KRRQLLRVKDRYEGFS

A0A6J1G9A4 leucine-rich repeat extensin-like protein 35.17e-2662.73Show/hide
Query:  PPPPITPPPPS-PSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTN--QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL
        PPPPI PPPPS PS             +HR  PPPP   +     K+PP   +N N++  +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLL
Subjt:  PPPPITPPPPS-PSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTN--QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL

Query:  RVKDRYEGFS
        R KDRY+GFS
Subjt:  RVKDRYEGFS

A0A6J1KAI1 leucine-rich repeat extensin-like protein 39.75e-2767.54Show/hide
Query:  PPPPITPPPPSP----SPPPFSPPPPPPPH-RHRRNP-PPPLASSVERKKKRPPVPPKNINTN-QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKR
        PPPPI  PPP P    SPPP  PPPP PP  +HR  P PPP+ +S +  KK P V   N + N +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKR
Subjt:  PPPPITPPPPSP----SPPPFSPPPPPPPH-RHRRNP-PPPLASSVERKKKRPPVPPKNINTN-QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKR

Query:  RQLLRVKDRYEGFS
        RQLLR KD+Y+GFS
Subjt:  RQLLRVKDRYEGFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54215.1 proline-rich family protein1.7e-0942.42Show/hide
Query:  PTTPPPPPITPPPPSPSPPPFSPPP---------------------------PPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKK
        P +PPPPP  PPPP P PPP  PPP                           PPPP    R+ PPP        ++ PP PP+  +  +  +  LNKGK 
Subjt:  PTTPPPPPITPPPPSPSPPPFSPPP---------------------------PPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKK

Query:  VGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD
        VGL FVG+ A+LQ+ VV FLVFKR+QLL +KD
Subjt:  VGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD

AT1G72600.1 hydroxyproline-rich glycoprotein family protein1.9e-0845.13Show/hide
Query:  ITPPPPSPSPPPFSPPPPPPP-------------HRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF
        ITPPPP P PPP S  PPP P             H HRR           R  K PP PP         K+ +N GK VGLFF G+AA LQ+ V  FL+F
Subjt:  ITPPPPSPSPPPFSPPPPPPP-------------HRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF

Query:  KRRQ-LLRVKDRY
        KRRQ LL++ DR+
Subjt:  KRRQ-LLRVKDRY

AT1G72600.2 hydroxyproline-rich glycoprotein family protein1.9e-0845.13Show/hide
Query:  ITPPPPSPSPPPFSPPPPPPP-------------HRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF
        ITPPPP P PPP S  PPP P             H HRR           R  K PP PP         K+ +N GK VGLFF G+AA LQ+ V  FL+F
Subjt:  ITPPPPSPSPPPFSPPPPPPP-------------HRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVF

Query:  KRRQ-LLRVKDRY
        KRRQ LL++ DR+
Subjt:  KRRQ-LLRVKDRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCAATCCCACTCTCTCGCCGCCGAGACCTTCTTCACCGCCTCCCTCTCCCTCTCCGCCACCACCGCCGTTGCCACCACCTCCCCACCACCCCGCCTCCGCCTCC
AATCACCCCACCGCCTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCTCCTCCGCCGCATCGCCATCGTCGTAATCCACCGCCTCCTCTTGCATCATCCGTGG
AGAGAAAGAAAAAACGACCACCAGTCCCTCCGAAAAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAACAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATT
GCCGCAGTCCTCCAAATCTGTGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAGGCTTTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCAATCCCACTCTCTCGCCGCCGAGACCTTCTTCACCGCCTCCCTCTCCCTCTCCGCCACCACCGCCGTTGCCACCACCTCCCCACCACCCCGCCTCCGCCTCC
AATCACCCCACCGCCTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCTCCTCCGCCGCATCGCCATCGTCGTAATCCACCGCCTCCTCTTGCATCATCCGTGG
AGAGAAAGAAAAAACGACCACCAGTCCCTCCGAAAAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAACAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATT
GCCGCAGTCCTCCAAATCTGTGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAGGCTTTTCATGA
Protein sequenceShow/hide protein sequence
MEPIPLSRRRDLLHRLPLPLRHHRRCHHLPTTPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGI
AAVLQICVVGFLVFKRRQLLRVKDRYEGFS