; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G027175 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G027175
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L44
Genome locationGy14Chr3:28291702..28292782
RNA-Seq ExpressionCsGy3G027175
SyntenyCsGy3G027175
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]2.07e-12081.89Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-
        MADSS+  PPSKSP  FLF+CFRSSSKLP KK SSIAPR RRT S TFRFKKSSATVPVDVA PSHDELSFSP+FKK PPLS I PKAPQV GEIVVDS 
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-

Query:  --SLKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAI
          SLKPSQTRKKP   QSNFTTKKLSPTRK AA LHSVS PSQ LTRQK FK+ VS HLPAAVATTSPAFSDGNKPTPKL T YPVKN DRVIMVV+VAI
Subjt:  --SLKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAI

Query:  VMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
        ++LWGRLCAILCTTALFYLGRRMRSE+E  GGG GRG   GNS
Subjt:  VMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS

KAG6606901.1 60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]4.22e-5954.47Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEI
        MA++SE + PSK PLHFL  CF SS K+ TKK  +      R  S  FRFKKSSATVP+DVA P       D+ SFSPEFKK PP   I  +AP V  +I
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEI

Query:  VVDSSLKPSQTRKKPQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIV
        V    +KPSQT KK +S      L+P ++TAALLHS+SLPS++L RQK  KK VS HL +AV T +P  S+  KP  K P   P K  D +I++V VAIV
Subjt:  VVDSSLKPSQTRKKPQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIV

Query:  MLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR
        +LWG+LCAILCTTALFY  RR+RSE E +GGG  R
Subjt:  MLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]1.30e-15798.33Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSS
        MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSF PEFKKSPPLSFIMPKAPQVGGEIVVDSS
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSS

Query:  LKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVML
        LKPSQTRKKP   QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVML
Subjt:  LKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVML

Query:  WGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
        WGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
Subjt:  WGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS

XP_022949237.1 uncharacterized protein LOC111452650 [Cucurbita moschata]5.02e-6154.89Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEI
        MA++SE + PSK PLHFL  CF SS K+ TKK  +   R  R  S  FRFKKSSATVP+DVA P       D+ SFSPEFKK PP   I  +AP V  +I
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEI

Query:  VVDSSLKPSQTRKKPQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIV
        V    +KPSQ  KK +S  +   L+P ++TAALLHS+SLPS++L RQK FKK VS HL +AV T +P  S+  KP  K P   P K  D +I++V VAIV
Subjt:  VVDSSLKPSQTRKKPQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIV

Query:  MLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR
        +LWG+LCAILCTTALFY  RR+RSE E +GGG  R
Subjt:  MLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR

XP_022982640.1 uncharacterized protein LOC111481455 [Cucurbita maxima]7.86e-5050.21Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-
        MA+SS+     K  LHFLF CFRSS  +  +KA  IA   RRT S  FRFKK SATVP+D A P HDELSFSPEF   PP S        + GEI+VDS 
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-

Query:  --SLKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAI
          ++K S+TRKK    QSN T +KL P +KT+  LHS          +K  KK +S HLP AVA   P  S  +  + K PT  P   FD V ++V VAI
Subjt:  --SLKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAI

Query:  VMLWGRLCAILCTTALFYLGRRMRSEIEPD---GGGSGRGRLS
        V+LWGRLCAILCT ALFYL R +RS+ E D    GG   G++S
Subjt:  VMLWGRLCAILCTTALFYLGRRMRSEIEPD---GGGSGRGRLS

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein6.27e-15898.33Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSS
        MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSF PEFKKSPPLSFIMPKAPQVGGEIVVDSS
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSS

Query:  LKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVML
        LKPSQTRKKP   QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVML
Subjt:  LKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVML

Query:  WGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
        WGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
Subjt:  WGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS

A0A5A7UA28 60S ribosomal protein L441.00e-12081.89Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-
        MADSS+  PPSKSP  FLF+CFRSSSKLP KK SSIAPR RRT S TFRFKKSSATVPVDVA PSHDELSFSP+FKK PPLS I PKAPQV GEIVVDS 
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-

Query:  --SLKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAI
          SLKPSQTRKKP   QSNFTTKKLSPTRK AA LHSVS PSQ LTRQK FK+ VS HLPAAVATTSPAFSDGNKPTPKL T YPVKN DRVIMVV+VAI
Subjt:  --SLKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAI

Query:  VMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
        ++LWGRLCAILCTTALFYLGRRMRSE+E  GGG GRG   GNS
Subjt:  VMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS

A0A6J1F3C2 uncharacterized protein LOC1114417607.33e-4850.2Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-
        MA+SS+     K  LHFLF CFRSS  +  +KA  IA   RRT S  FRFKKSSATVP+D A P HDELS SPEF   PP        P + GEI+VDS 
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-

Query:  --SLKPSQTRKK-------PQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVA--TTSPAFSDGNKPTPKLPTYYPVKNFDRVIM
          ++KPS+TRKK       P+S  T    +  +KT+  LHS          +K  KK +S HLP A A  TTS   SD  KP    PT  P K FD VI+
Subjt:  --SLKPSQTRKK-------PQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVA--TTSPAFSDGNKPTPKLPTYYPVKNFDRVIM

Query:  VVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPD---GGGSGRGRLS
        +V VAIV+LWGRLCAILCT ALFYL R +RS+ E D    GG   GR+S
Subjt:  VVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPD---GGGSGRGRLS

A0A6J1GBH7 uncharacterized protein LOC1114526502.43e-6154.89Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEI
        MA++SE + PSK PLHFL  CF SS K+ TKK  +   R  R  S  FRFKKSSATVP+DVA P       D+ SFSPEFKK PP   I  +AP V  +I
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEI

Query:  VVDSSLKPSQTRKKPQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIV
        V    +KPSQ  KK +S  +   L+P ++TAALLHS+SLPS++L RQK FKK VS HL +AV T +P  S+  KP  K P   P K  D +I++V VAIV
Subjt:  VVDSSLKPSQTRKKPQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIV

Query:  MLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR
        +LWG+LCAILCTTALFY  RR+RSE E +GGG  R
Subjt:  MLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR

A0A6J1IZW6 uncharacterized protein LOC1114814553.81e-5050.21Show/hide
Query:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-
        MA+SS+     K  LHFLF CFRSS  +  +KA  IA   RRT S  FRFKK SATVP+D A P HDELSFSPEF   PP S        + GEI+VDS 
Subjt:  MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS-

Query:  --SLKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAI
          ++K S+TRKK    QSN T +KL P +KT+  LHS          +K  KK +S HLP AVA   P  S  +  + K PT  P   FD V ++V VAI
Subjt:  --SLKPSQTRKKP---QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAI

Query:  VMLWGRLCAILCTTALFYLGRRMRSEIEPD---GGGSGRGRLS
        V+LWGRLCAILCT ALFYL R +RS+ E D    GG   G++S
Subjt:  VMLWGRLCAILCTTALFYLGRRMRSEIEPD---GGGSGRGRLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCTTCAGAAAATATACCTCCCTCCAAATCCCCACTCCATTTCCTCTTCAGTTGCTTCCGATCTTCCTCCAAACTTCCTACGAAAAAGGCTTCTTCG
ATCGCCCCACGCATCCGCCGGACTTCGTCGCGTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCGATCCATCTCATGATGAGCTCTCT
TTTTCGCCGGAGTTCAAGAAATCGCCTCCACTGTCGTTCATTATGCCGAAAGCGCCACAGGTCGGAGGTGAGATCGTTGTGGATTCGTCACTAAAGCCGAGTCAA
ACTCGGAAGAAGCCCCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAACAGCCGCGTTGTTGCACTCCGTATCTCTTCCTTCTCAGCAATTGACC
CGCCAGAAATATTTTAAAAAACCAGTCTCTGGTCATCTCCCTGCCGCCGTCGCAACCACCTCCCCGGCGTTTTCAGACGGTAATAAACCGACCCCGAAGTTGCCT
ACGTATTATCCGGTCAAGAATTTCGATCGGGTGATTATGGTTGTTATTGTGGCGATTGTGATGCTGTGGGGACGACTATGCGCCATACTCTGCACAACAGCGCTG
TTCTACTTGGGACGTCGAATGAGATCGGAAATCGAACCGGACGGCGGCGGCAGCGGCAGAGGTAGGCTTAGCGGGAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAATAAATTGGGTAAAGGGTCTTTCATTTATTTATTTAAAAAATAAAAATATTATTTTTTTGGATTCTGGGTTATTCACTCAAATTCCATTTAAAACTCGCTTC
AACGCTTCTTCTTCCTCCAAATGCCGTTCTCATTCTCCTCTGCTTCATTTTTGCTCCTCCATGGCGGATTCTTCAGAAAATATACCTCCCTCCAAATCCCCACTC
CATTTCCTCTTCAGTTGCTTCCGATCTTCCTCCAAACTTCCTACGAAAAAGGCTTCTTCGATCGCCCCACGCATCCGCCGGACTTCGTCGCGTACTTTCCGATTC
AAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCGATCCATCTCATGATGAGCTCTCTTTTTCGCCGGAGTTCAAGAAATCGCCTCCACTGTCGTTCATTATG
CCGAAAGCGCCACAGGTCGGAGGTGAGATCGTTGTGGATTCGTCACTAAAGCCGAGTCAAACTCGGAAGAAGCCCCAGTCAAATTTCACGACGAAGAAACTCTCG
CCGACGAGAAAAACAGCCGCGTTGTTGCACTCCGTATCTCTTCCTTCTCAGCAATTGACCCGCCAGAAATATTTTAAAAAACCAGTCTCTGGTCATCTCCCTGCC
GCCGTCGCAACCACCTCCCCGGCGTTTTCAGACGGTAATAAACCGACCCCGAAGTTGCCTACGTATTATCCGGTCAAGAATTTCGATCGGGTGATTATGGTTGTT
ATTGTGGCGATTGTGATGCTGTGGGGACGACTATGCGCCATACTCTGCACAACAGCGCTGTTCTACTTGGGACGTCGAATGAGATCGGAAATCGAACCGGACGGC
GGCGGCAGCGGCAGAGGTAGGCTTAGCGGGAATTCTTGAGAGGATTAGGCGAAAATACGTTGGTGAATTGAACACGGTTACGGAAAACCGCCATGCGAGAGAAGG
TTGGAGAAGAGGTTTTCTTTGAATGACGGAAGAGAGATGGTGTTATTTTTGTAAATTTAATGGTCAGTGGTGTTTAAACTCTGTAAAAAACTAATAATTTGACTA
ATTCATAAACATATAAAGGAAAATTTGCACT
Protein sequenceShow/hide protein sequence
MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQ
TRKKPQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTAL
FYLGRRMRSEIEPDGGGSGRGRLSGNS