; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G028490 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G028490
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description50S ribosomal protein L35
Genome locationGy14Chr3:29430394..29431958
RNA-Seq ExpressionCsGy3G028490
SyntenyCsGy3G028490
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]2.24e-5277.27Show/hide
Query:  MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLL
        +AMAIGHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ S+Y+ WHVG  
Subjt:  MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLL

Query:  ERRCVAAFGVGLGYVVVALKTQIELANAIGPS
                GVG GY+V ALKTQI LANA+  S
Subjt:  ERRCVAAFGVGLGYVVVALKTQIELANAIGPS

KAE8650972.1 hypothetical protein Csa_002588 [Cucumis sativus]2.43e-11798.91Show/hide
Query:  MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLL
        MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHA SRYRSWHVGLL
Subjt:  MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLL

Query:  ERRCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCVFVLWLQKWKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRQFL
        ERRCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCVFVLWLQK KYLWAMLLLIPLFPLLLFQLDTFVHLLHLRQFL
Subjt:  ERRCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCVFVLWLQKWKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRQFL

TYK24910.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]1.96e-5279.67Show/hide
Query:  GHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLERRCV
        GHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ S+Y+SWHVG       
Subjt:  GHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLERRCV

Query:  AAFGVGLGYVVVALKTQIELANA
           GVG GY+V ALKTQI LANA
Subjt:  AAFGVGLGYVVVALKTQIELANA

XP_008442323.1 PREDICTED: uncharacterized protein LOC103486229 [Cucumis melo]6.58e-9082.32Show/hide
Query:  MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLER
        MAIGHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ S+Y+SWHVG    
Subjt:  MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLER

Query:  RCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCVFVLWLQKWKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRQF
              GVG GY+V ALKTQI LANA+G SFSSIIWVYLCVFV+WLQK KYLWA+LLL+PLFPLLLFQLDTFVHLLHLR F
Subjt:  RCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCVFVLWLQKWKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRQF

XP_038906422.1 uncharacterized protein LOC120092221 [Benincasa hispida]1.51e-7473.94Show/hide
Query:  MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLL
        +AMA+G RRSFKI+V AKICNLYIKLKATLK PSGK QRLLKLDKLLI  DSKS S IL+QRRRTLKSRMLSFVKKHLG  RSK PHA S  +SW VG +
Subjt:  MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLL

Query:  ERRCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCV--FVLWLQKWKYL--WAMLLLIPLFPLLLFQLDTFVHLLHLRQFL
        E RCVA FGVGLGY++ AL T I L NAI PSFSS IWV LC+  FVLWL K KYL  WA+L LI L PL L QLD FVHLLHLR FL
Subjt:  ERRCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCV--FVLWLQKWKYL--WAMLLLIPLFPLLLFQLDTFVHLLHLRQFL

TrEMBL top hitse value%identityAlignment
A0A0A0LCL9 50S ribosomal protein L359.86e-8899.29Show/hide
Query:  MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLER
        MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHA SRYRSWHVGLLER
Subjt:  MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLER

Query:  RCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLC
        RCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLC
Subjt:  RCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLC

A0A1R3KWS9 Uncharacterized protein (Fragment)4.92e-0546.84Show/hide
Query:  MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQR---LLKLDKLLIEVDSKSVSRILL--QRRRTLKSRMLSFVKK
        M +G +R +K S+QAK      KLKAT  LP+ KF R   LL+L+K +I +  KS S I +  Q++RTLKSR L F++K
Subjt:  MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQR---LLKLDKLLIEVDSKSVSRILL--QRRRTLKSRMLSFVKK

A0A1S3B4Y8 uncharacterized protein LOC1034862293.18e-9082.32Show/hide
Query:  MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLER
        MAIGHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ S+Y+SWHVG    
Subjt:  MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLER

Query:  RCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCVFVLWLQKWKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRQF
              GVG GY+V ALKTQI LANA+G SFSSIIWVYLCVFV+WLQK KYLWA+LLL+PLFPLLLFQLDTFVHLLHLR F
Subjt:  RCVAAFGVGLGYVVVALKTQIELANAIGPSFSSIIWVYLCVFVLWLQKWKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRQF

A0A5A7TM08 RING-H2 finger protein ATL74-like1.09e-5277.27Show/hide
Query:  MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLL
        +AMAIGHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ S+Y+ WHVG  
Subjt:  MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLL

Query:  ERRCVAAFGVGLGYVVVALKTQIELANAIGPS
                GVG GY+V ALKTQI LANA+  S
Subjt:  ERRCVAAFGVGLGYVVVALKTQIELANAIGPS

A0A5D3DNQ2 50S ribosomal protein L359.51e-5379.67Show/hide
Query:  GHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLERRCV
        GHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ S+Y+SWHVG       
Subjt:  GHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLERRCV

Query:  AAFGVGLGYVVVALKTQIELANA
           GVG GY+V ALKTQI LANA
Subjt:  AAFGVGLGYVVVALKTQIELANA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCGATAGGTCATCGGCGGTCATTCAAAATCAGCGTTCAGGCCAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTCCCTTCCGGGAAATT
CCAACGCCTCCTAAAGCTTGATAAACTACTCATCGAAGTGGATTCCAAATCCGTATCTCGGATCCTCCTTCAACGGCGACGGACTTTGAAATCTCGAATGCTCAGCTTCG
TAAAGAAGCATTTGGGACATCGCCGATCTAAATTCCCACATGCTGCATCTAGATATCGGTCTTGGCATGTTGGCCTTCTGGAACGAAGGTGTGTGGCTGCTTTTGGTGTG
GGATTGGGTTATGTGGTTGTTGCACTCAAGACACAAATTGAGCTTGCAAATGCCATTGGTCCCAGCTTCAGCTCCATTATATGGGTTTACCTGTGTGTATTTGTTTTATG
GCTCCAGAAATGGAAGTACCTTTGGGCAATGTTATTGCTAATTCCTCTGTTTCCTCTCTTACTCTTCCAATTGGATACATTTGTACATCTTTTACATTTACGCCAATTTT
TATGA
mRNA sequenceShow/hide mRNA sequence
CCCCAAATGGGCCGATCATCCGAATGGGCCCATACTGTATGAGATTAGGTCAGTAAGTAATAGGATGATGCTCTCATTTCAGTGAGCGGTGTCATGTATGGCAATGGCGA
TAGGTCATCGGCGGTCATTCAAAATCAGCGTTCAGGCCAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTCCCTTCCGGGAAATTCCAACGCCTCCTA
AAGCTTGATAAACTACTCATCGAAGTGGATTCCAAATCCGTATCTCGGATCCTCCTTCAACGGCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTAAAGAAGCATTT
GGGACATCGCCGATCTAAATTCCCACATGCTGCATCTAGATATCGGTCTTGGCATGTTGGCCTTCTGGAACGAAGGTGTGTGGCTGCTTTTGGTGTGGGATTGGGTTATG
TGGTTGTTGCACTCAAGACACAAATTGAGCTTGCAAATGCCATTGGTCCCAGCTTCAGCTCCATTATATGGGTTTACCTGTGTGTATTTGTTTTATGGCTCCAGAAATGG
AAGTACCTTTGGGCAATGTTATTGCTAATTCCTCTGTTTCCTCTCTTACTCTTCCAATTGGATACATTTGTACATCTTTTACATTTACGCCAATTTTTATGACATATTTC
TTTTTCTTCCTTGTTCTGTTTTTCTCTTTTATCCAAATTCATCTCCCAATTTTTAAAAAAAATTATTTTATTATCTAAACCAACCATTTACATGAAAACTATTTTCGAAA
CAAAGTATATACAGTTTTTTTATCTTAATGTTTTCCAAAGAATTCTTGGATTGAAGGTAATCCAATGTCGACAAACTCAAGTTGTTTCAAAACAATTCTGCTCCATCGTC
GTCTCCAGCACAAGAACCATCCACTTGTGAATGCAATAATACTCTTACCACGGGACATATACCCAAATTAATACTAAACAAAGATAATAAATTTACAAATATTTAGTCAC
ATCAACGTCTCCTTATTTTTCCCATTTACCCAACTGACATTTCAGAGAGGGAAAAACGGTGCATCTCGAACTGAATTTGTTGTTTTGTCTCTCCTGGATCGATTTGAAGT
TTCGATCGGTTACGTTGTTCCTGGATAAATACATCTTATTCCCGAATAAAAAGAAATGGAAGGAAAAAAGCCTACTTGGGCTACAAATAATAAATAAAAAATAGATTAAA
AAGAAGTATTGATAGATATGTAACGAAATTAGAAGGATGAAGAGATTGAAATGGTTAGGAGAGTTTAAATTGAAATCAAAACATATCTCAATATACTTATTTGGTTACTC
GTTTAGATACTGAAAAGAAAAAGAAAAAGAAAAAATTCAGAAATTTCATTTGAAAGGTATAGTATATGTGATTTTGAATAGAAATCTGTGTAATTGTTTATAAATTAATA
AATTTATATATAAAATTACAATAATTTATCAAAATGAATTTGAGTGAAT
Protein sequenceShow/hide protein sequence
MAMAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQRRRTLKSRMLSFVKKHLGHRRSKFPHAASRYRSWHVGLLERRCVAAFGV
GLGYVVVALKTQIELANAIGPSFSSIIWVYLCVFVLWLQKWKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRQFL