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CsGy3G028500 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G028500
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRING-type domain-containing protein
Genome locationGy14Chr3:29432360..29432680
RNA-Seq ExpressionCsGy3G028500
SyntenyCsGy3G028500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]3.48e-5280.95Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHL
        NFDVHM + LAALLC LIGAVGVNSI+RC LR RYSFE ERA+E A   GLKK+E+ALI I VYG+DANIK+TDCAICLAQF+VGDKLRMLPICNHGFHL
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHL

Query:  TCIDT
        TCIDT
Subjt:  TCIDT

KGN58695.1 hypothetical protein Csa_000746 [Cucumis sativus]2.61e-7099.06Show/hide
Query:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFH
        MNFDVHM VILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFH
Subjt:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFH

Query:  LTCIDT
        LTCIDT
Subjt:  LTCIDT

XP_008443568.1 PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo]6.26e-5681.9Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHL
        NFDVHM + LAALLC LIGAVGVNSI+RC LRCRYSFE ERA+E A   GLKK+E+ALI I VYG+DANIK+TDCAICLAQF+VGDKLRMLPICNHGFHL
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHL

Query:  TCIDT
        TCIDT
Subjt:  TCIDT

XP_023540727.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]4.73e-3964.55Show/hide
Query:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAG---TPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLRMLPICN
        MN D HM VILAALL ALIGA+GVNS++RCVL   + F  ER +E A      GLKKRE++ I + VYG+D A IK TDCAICL +F+VGDK+RMLPICN
Subjt:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAG---TPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLRMLPICN

Query:  HGFHLTCIDT
        HGFH+ CIDT
Subjt:  HGFHLTCIDT

XP_031737578.1 RING-H2 finger protein ATL74-like [Cucumis sativus]6.69e-6599Show/hide
Query:  MRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHLTCIDT
        M VILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHLTCIDT
Subjt:  MRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHLTCIDT

TrEMBL top hitse value%identityAlignment
A0A0A0L9Q6 RING-type domain-containing protein1.26e-7099.06Show/hide
Query:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFH
        MNFDVHM VILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFH
Subjt:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFH

Query:  LTCIDT
        LTCIDT
Subjt:  LTCIDT

A0A1S3B8C4 RING-H2 finger protein ATL74-like3.03e-5681.9Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHL
        NFDVHM + LAALLC LIGAVGVNSI+RC LRCRYSFE ERA+E A   GLKK+E+ALI I VYG+DANIK+TDCAICLAQF+VGDKLRMLPICNHGFHL
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHL

Query:  TCIDT
        TCIDT
Subjt:  TCIDT

A0A5A7TM08 RING-H2 finger protein ATL74-like1.68e-5280.95Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHL
        NFDVHM + LAALLC LIGAVGVNSI+RC LR RYSFE ERA+E A   GLKK+E+ALI I VYG+DANIK+TDCAICLAQF+VGDKLRMLPICNHGFHL
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHL

Query:  TCIDT
        TCIDT
Subjt:  TCIDT

A0A6J1EVU3 RING-H2 finger protein ATL74-like1.33e-3663.64Show/hide
Query:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAG---TPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLRMLPICN
        MN D HM VILAALL ALIGA+GVNS++RCVL   + F  ER +E A      GLKKRE++ I + VYG+D A IK TDCAICL +F+VGDK+RMLP CN
Subjt:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAG---TPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLRMLPICN

Query:  HGFHLTCIDT
        HGFH+ CIDT
Subjt:  HGFHLTCIDT

A0A6J1I6E6 RING-H2 finger protein ATL74-like7.32e-3963.64Show/hide
Query:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAG---TPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLRMLPICN
        MN D HM VILAALL ALIGA+GVN+++RCVL   + F  ER +E A      GLKKRE++ I + VYG+D A IK TDCAICL +F+VGDK+RMLPICN
Subjt:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAG---TPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLRMLPICN

Query:  HGFHLTCIDT
        HGFH+ CIDT
Subjt:  HGFHLTCIDT

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL103.4e-1533.93Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELER------AQEGAGTPGLKKREIALISIKVYGTDANIKNTD--CAICLAQFKVGDKLRMLP
        N   ++ ++L+ L+C +I  +G++ I+RC LR    F +        +  G+   G+KK+ + +  +  Y  + N+   D  C ICL+ F  G++LR+LP
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELER------AQEGAGTPGLKKREIALISIKVYGTDANIKNTD--CAICLAQFKVGDKLRMLP

Query:  ICNHGFHLTCID
         CNHGFH+ CID
Subjt:  ICNHGFHLTCID

Q6NQG7 RING-H2 finger protein ATL781.2e-1737.27Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEG----AGTPGLKKREIALISIKVYGTDANIK--NTDCAICLAQFKVGDKLRMLPIC
        NFD ++ ++L+ LLCAL+ ++G+NSI+RC LRC      E   +         G+K++ +       Y T+ N+   +T+CAICL++F   +++++LP C
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEG----AGTPGLKKREIALISIKVYGTDANIK--NTDCAICLAQFKVGDKLRMLPIC

Query:  NHGFHLTCID
        +HGFH+ CID
Subjt:  NHGFHLTCID

Q9FLC6 RING-H2 finger protein ATL731.5e-2349.07Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRC--RYSFELERAQEGAG-TPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHG
        + D HM +ILAALLCALI A+G+NS+LRCVLRC  R++   +     A    G+KKR + +I +  Y  +  +K T+C ICL  F  G+ +R+LP CNHG
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRC--RYSFELERAQEGAG-TPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHG

Query:  FHLTCIDT
        FH+ CIDT
Subjt:  FHLTCIDT

Q9LZV8 RING-H2 finger protein ATL741.4e-2452.25Show/hide
Query:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGT----PGLKKREIALISIKVYGT-DANIKNTDCAICLAQFKVGDKLRMLPIC
        MNFD +M +ILAALLCALI A+G+NSILRC +RC +      A   AGT     GLKKRE+    +  YG+ +  I  T+CAICL +F  G+++R+LP C
Subjt:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGT----PGLKKREIALISIKVYGT-DANIKNTDCAICLAQFKVGDKLRMLPIC

Query:  NHGFHLTCIDT
        NH FH++CIDT
Subjt:  NHGFHLTCIDT

Q9SG96 RING-H2 finger protein ATL721.6e-2046.55Show/hide
Query:  FDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSF----ELERAQEG-------AGTPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLR
        FD +M +ILAALLCALI A+ +NS LRCVLR    F    ++  A          A   GLKK+ +  I + +YG+   ++K T+C ICL  F+ G+K+R
Subjt:  FDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSF----ELERAQEG-------AGTPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLR

Query:  MLPICNHGFHLTCIDT
        +LP CNHGFH+ CIDT
Subjt:  MLPICNHGFHLTCIDT

Arabidopsis top hitse value%identityAlignment
AT1G49220.1 RING/U-box superfamily protein2.4e-1633.93Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELER------AQEGAGTPGLKKREIALISIKVYGTDANIKNTD--CAICLAQFKVGDKLRMLP
        N   ++ ++L+ L+C +I  +G++ I+RC LR    F +        +  G+   G+KK+ + +  +  Y  + N+   D  C ICL+ F  G++LR+LP
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELER------AQEGAGTPGLKKREIALISIKVYGTDANIKNTD--CAICLAQFKVGDKLRMLP

Query:  ICNHGFHLTCID
         CNHGFH+ CID
Subjt:  ICNHGFHLTCID

AT1G49230.1 RING/U-box superfamily protein8.8e-1937.27Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEG----AGTPGLKKREIALISIKVYGTDANIK--NTDCAICLAQFKVGDKLRMLPIC
        NFD ++ ++L+ LLCAL+ ++G+NSI+RC LRC      E   +         G+K++ +       Y T+ N+   +T+CAICL++F   +++++LP C
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEG----AGTPGLKKREIALISIKVYGTDANIK--NTDCAICLAQFKVGDKLRMLPIC

Query:  NHGFHLTCID
        +HGFH+ CID
Subjt:  NHGFHLTCID

AT3G10910.1 RING/U-box superfamily protein1.1e-2146.55Show/hide
Query:  FDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSF----ELERAQEG-------AGTPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLR
        FD +M +ILAALLCALI A+ +NS LRCVLR    F    ++  A          A   GLKK+ +  I + +YG+   ++K T+C ICL  F+ G+K+R
Subjt:  FDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSF----ELERAQEG-------AGTPGLKKREIALISIKVYGTD-ANIKNTDCAICLAQFKVGDKLR

Query:  MLPICNHGFHLTCIDT
        +LP CNHGFH+ CIDT
Subjt:  MLPICNHGFHLTCIDT

AT5G01880.1 RING/U-box superfamily protein9.7e-2652.25Show/hide
Query:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGT----PGLKKREIALISIKVYGT-DANIKNTDCAICLAQFKVGDKLRMLPIC
        MNFD +M +ILAALLCALI A+G+NSILRC +RC +      A   AGT     GLKKRE+    +  YG+ +  I  T+CAICL +F  G+++R+LP C
Subjt:  MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGT----PGLKKREIALISIKVYGT-DANIKNTDCAICLAQFKVGDKLRMLPIC

Query:  NHGFHLTCIDT
        NH FH++CIDT
Subjt:  NHGFHLTCIDT

AT5G05280.1 RING/U-box superfamily protein1.1e-2449.07Show/hide
Query:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRC--RYSFELERAQEGAG-TPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHG
        + D HM +ILAALLCALI A+G+NS+LRCVLRC  R++   +     A    G+KKR + +I +  Y  +  +K T+C ICL  F  G+ +R+LP CNHG
Subjt:  NFDVHMRVILAALLCALIGAVGVNSILRCVLRC--RYSFELERAQEGAG-TPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHG

Query:  FHLTCIDT
        FH+ CIDT
Subjt:  FHLTCIDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCGATGTGCACATGAGAGTGATACTGGCGGCTTTATTATGTGCACTCATTGGAGCGGTTGGAGTAAACTCTATTTTACGCTGCGTTTTGCGGTGTAGGTATAG
CTTTGAGTTGGAGAGAGCACAGGAGGGCGCTGGCACACCGGGGCTTAAGAAGCGAGAAATCGCTTTGATTTCGATTAAGGTTTATGGAACTGATGCAAATATTAAGAACA
CAGATTGCGCAATTTGCCTTGCCCAGTTTAAGGTGGGTGACAAGCTTAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGCATTGATACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCGATGTGCACATGAGAGTGATACTGGCGGCTTTATTATGTGCACTCATTGGAGCGGTTGGAGTAAACTCTATTTTACGCTGCGTTTTGCGGTGTAGGTATAG
CTTTGAGTTGGAGAGAGCACAGGAGGGCGCTGGCACACCGGGGCTTAAGAAGCGAGAAATCGCTTTGATTTCGATTAAGGTTTATGGAACTGATGCAAATATTAAGAACA
CAGATTGCGCAATTTGCCTTGCCCAGTTTAAGGTGGGTGACAAGCTTAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGCATTGATACTTGA
Protein sequenceShow/hide protein sequence
MNFDVHMRVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALISIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHLTCIDT