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CsGy3G030500 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G030500
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein MODIFIER OF SNC1 11-like
Genome locationGy14Chr3:30507180..30509453
RNA-Seq ExpressionCsGy3G030500
SyntenyCsGy3G030500
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442609.1 PREDICTED: protein MODIFIER OF SNC1 11-like isoform X1 [Cucumis melo]2.79e-9192.72Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF +ELS+N LPGPKQTLPL FGI AAGNGHVDQHQNR S  TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        IDSVCGPDEMAKAEELKRKARAERFELLTLS+ATDEEAKKKARLARFAP L
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

XP_011651924.1 protein MODIFIER OF SNC1 11 isoform X1 [Cucumis sativus]2.81e-10099.34Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFTKELSKN LPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

XP_022934788.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata]1.05e-7778.4Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRS-----------CGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFT+ELS+N LPGPK  LPL  G AAAGNG VDQHQNRRS             TKEG ESQ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRS-----------CGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLS+ATDEEAKKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

XP_023527279.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo]2.11e-7778.4Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRS-----------CGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDF++ELS+N LPGPK  LPL  G AAAGNG VDQHQNRRS             TKEG ESQ +A+GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRS-----------CGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLS+ATDEEAKKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

XP_038904188.1 protein MODIFIER OF SNC1 11-like [Benincasa hispida]2.95e-8286.27Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGT--KEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER
        MAT+FT+ELS+N LPGPKQTLPL  G AAAGNG VDQHQNRRS  T  KE IESQ +AVGRIPE H SVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGT--KEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER

Query:  FGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        FGIDSVCGPDEM KAEELKRKARAERFELLTLS+AT EEAKKKARLARFAP L
Subjt:  FGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein1.36e-10099.34Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFTKELSKN LPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X11.35e-9192.72Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF +ELS+N LPGPKQTLPL FGI AAGNGHVDQHQNR S  TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        IDSVCGPDEMAKAEELKRKARAERFELLTLS+ATDEEAKKKARLARFAP L
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X11.35e-9192.72Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF +ELS+N LPGPKQTLPL FGI AAGNGHVDQHQNR S  TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        IDSVCGPDEMAKAEELKRKARAERFELLTLS+ATDEEAKKKARLARFAP L
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like5.06e-7878.4Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRS-----------CGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFT+ELS+N LPGPK  LPL  G AAAGNG VDQHQNRRS             TKEG ESQ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRS-----------CGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLS+ATDEEAKKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

A0A6J1J7D8 protein MODIFIER OF SNC1 11-like1.19e-7677.16Show/hide
Query:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRS-----------CGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFT+ELS+N LPGPK  LPL  G AAAGNG VDQHQNRR+             TKEG ES+ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRS-----------CGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLS+ATDEEAKKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL

SwissProt top hitse value%identityAlignment
Q9LZ08 Protein MODIFIER OF SNC1 111.5e-1650Show/hide
Query:  NGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELL
        +G   +  +    G+  G++S     G I    + V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + 
Subjt:  NGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELL

Query:  TLSVATD---EEAKKKARLARF
        + +  TD   EEAKKKARLARF
Subjt:  TLSVATD---EEAKKKARLARF

Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein1.1e-1750Show/hide
Query:  NGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELL
        +G   +  +    G+  G++S     G I    + V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + 
Subjt:  NGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELL

Query:  TLSVATD---EEAKKKARLARF
        + +  TD   EEAKKKARLARF
Subjt:  TLSVATD---EEAKKKARLARF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGATTTCACAAAAGAACTGAGCAAAAACATTCTTCCAGGACCGAAGCAAACTCTACCCCTAGCTTTTGGAATCGCAGCCGCTGGTAATGGCCACGTAGATCA
ACACCAAAATCGTCGTTCTTGCGGTACAAAGGAAGGTATTGAATCTCAGAGTTCCGCCGTGGGGAGAATACCAGAGTCTCATGCTTCTGTTTTTGATATCTTTAAGAAGA
TCCGTCGGGCGGAGCGATTTGGGATCCCCGTACGTTTATCGGAGGCAGAAAAGCGATTCTCTCGAGCTGAGAGGTTCGGCATTGATTCAGTGTGTGGACCGGATGAAATG
GCCAAAGCAGAGGAGCTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCTTAACTCTGTCTGTGGCTACCGACGAAGAGGCAAAGAAGAAAGCTCGGCTTGCCAGATT
TGCCCCGTGTTTATAG
mRNA sequenceShow/hide mRNA sequence
CCCTCTTTATATTATCGATTCTAAATTTCGCGCAGGTCTCGATCTTCCTTCTCCAATGGCGACCGATTTCACAAAAGAACTGAGCAAAAACATTCTTCCAGGACCGAAGC
AAACTCTACCCCTAGCTTTTGGAATCGCAGCCGCTGGTAATGGCCACGTAGATCAACACCAAAATCGTCGTTCTTGCGGTACAAAGGAAGGTATTGAATCTCAGAGTTCC
GCCGTGGGGAGAATACCAGAGTCTCATGCTTCTGTTTTTGATATCTTTAAGAAGATCCGTCGGGCGGAGCGATTTGGGATCCCCGTACGTTTATCGGAGGCAGAAAAGCG
ATTCTCTCGAGCTGAGAGGTTCGGCATTGATTCAGTGTGTGGACCGGATGAAATGGCCAAAGCAGAGGAGCTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCTTAA
CTCTGTCTGTGGCTACCGACGAAGAGGCAAAGAAGAAAGCTCGGCTTGCCAGATTTGCCCCGTGTTTATAGAATTCCCTTTTGGTTAAACAACAAAGCAACATCAACAAT
TCTTATGCACAGCCAAACTATTATTCATTTGATTGGCCAATTGAACAAGCCGAGCTTACCTATAATAACAACTCCTTGTCTCTGATACCCCTTAGTTATTCGTATCCTGA
ACAGTTTAAGGATGCGGAAATTATTTGTATGAACCCTATAGAATTGAACTCCATTAGACGGAGGTGAAGTATTAATTTCTAGAACTGCACCCTCTTGATGGGTACTTTCA
TTCAATTTTCTACATGCCCATTTTTGTTTTCAAAATTAAATTATCTAATACTACTATAATCATCGTTCTTTTAATGTTTAAGAAAGTCCTTCGAGTTTGATCTAAGTAAA
TGGCAAGGGCGATGTTCTTGTTGGTTCTTTTTAGTAGGTTTAGCGAATTGTTTGGTGAAGGCTTTCAATGCTCAATTGTTATACAGTCTATAGCTTACAGTTTCACATTC
TGTTTTCTGACCACGGTTTTATGGAAGGCAGAACAATGGCCTAAAAGAAGTTTTTCCATCCGTTTCATCCATTTATGATCAACATACTTCTGATTTGCACCTTATCTTAC
AGATCTTATTCAACTTTATTAACACGGGAGAGGTTATCTAATTGCTTCTTTTATCCTTCGCAGGTCTCACTTAATCTTCATGGGTCTTCATGATTTAGTTTTTTCTCCAC
ATTTTGCACACTGAAATCCTGATGCATAGCGTTATTGCTGTCACCCAGGTGCCTTTTCTTGAGTCGTTGTGGATAAGATATGATGGCATGAGGCTCTTAGCCATTCTTTT
CTATAGCCCAAGTGTTTTCTTTTTTGTTTCTATTACTTTTGAGGATCTGTAAGAGGAAAAAACAAAAAAAAAAATGTTGATTGACACAGGCGATGGATTGAATTCAGAAT
CTTCCTTCAGTTTCATACCACATTTAAATCACCTTTAGTTTTTTTTCCCTATCTCCTTAGCAACTGCCTGCATCATTTTTCTGCTCTGATAGTTGTAGTTCTAAAGGTAG
CAAATGGCATGGGTCTTTGGTCTTAATCATTATTGAGAATGGCAGATGGAGCTCAGAAGCATTTAGGATTTGCTTCAAAAGTGTTGAGACTGCTCTTCACTCTGTTTGAC
TTGCCCATATCTTTTTCAGTAATCACTAATAAAGGGTCTTGGAAAATCTTCAGTAGCCTGTCAGATGAGGTAACGTATGGCTTGCTCTGTGTTTCAGGCTTGCTTTTCTT
GGGGAACAGAAATGCAATTGTTGTACATCTTGGTGAAGGGTATGATATCATACAAACCCCCCCACTTACCCCACACACACTCACACACAAGAAGAAGAAGAAGAAGAAGA
AGAAG
Protein sequenceShow/hide protein sequence
MATDFTKELSKNILPGPKQTLPLAFGIAAAGNGHVDQHQNRRSCGTKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDSVCGPDEM
AKAEELKRKARAERFELLTLSVATDEEAKKKARLARFAPCL