; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G033410 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G033410
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionVQ domain-containing protein
Genome locationGy14Chr3:32419634..32420106
RNA-Seq ExpressionCsGy3G033410
SyntenyCsGy3G033410
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043778.1 protein MKS1-like [Cucumis melo var. makuwa]1.73e-5080Show/hide
Query:  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
        MM+    ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRSPK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D
Subjt:  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND

Query:  ---EEFVSVCNCIPS
           EEF S CNCIPS
Subjt:  ---EEFVSVCNCIPS

KAE8125233.1 hypothetical protein FH972_020066 [Carpinus fangiana]3.04e-1650Show/hide
Query:  TARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEE
        +++   QL+GPRP  L V KSS+     K  KN P P    R R SP+IIYL SPKVIHVRPEEF   VQRLTGN  +  + +S  S+  M+ DE 
Subjt:  TARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEE

KAG6596645.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.70e-3669.91Show/hide
Query:  SATARNHS--QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND--
        ++ ARN    +LRGPRPPPLTVNKSS T I KKST  N  PI N   RR P+I+YLRSPK+IHVRPEEFKSFVQRLTGN SSVAVVA+S SATGMI D  
Subjt:  SATARNHS--QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND--

Query:  -EEFVSVCNCIPS
         E  VS CN IPS
Subjt:  -EEFVSVCNCIPS

KGN59247.1 hypothetical protein Csa_002000 [Cucumis sativus]4.93e-7199.11Show/hide
Query:  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
        MMITSA ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
Subjt:  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND

Query:  EEFVSVCNCIPS
        EEFVSVCNCIPS
Subjt:  EEFVSVCNCIPS

XP_008443599.1 PREDICTED: protein MKS1-like [Cucumis melo]5.43e-4983.33Show/hide
Query:  ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFV
        ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRSPK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF 
Subjt:  ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFV

Query:  SVCNCIPS
        S CNCIPS
Subjt:  SVCNCIPS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW5 VQ domain-containing protein2.39e-7199.11Show/hide
Query:  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
        MMITSA ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
Subjt:  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND

Query:  EEFVSVCNCIPS
        EEFVSVCNCIPS
Subjt:  EEFVSVCNCIPS

A0A1S3B975 protein MKS1-like2.63e-4983.33Show/hide
Query:  ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFV
        ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRSPK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF 
Subjt:  ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFV

Query:  SVCNCIPS
        S CNCIPS
Subjt:  SVCNCIPS

A0A2N9GB07 VQ domain-containing protein1.20e-1857.14Show/hide
Query:  ITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCS
        + S T + + QL+GPRP PLTVNKSS T I K+     PLP    R R SP+IIYL+SPKVIHVRPEEF   VQ+LTGN++   V A S S
Subjt:  ITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCS

A0A5D3DP92 Protein MKS1-like8.37e-5180Show/hide
Query:  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
        MM+    ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRSPK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D
Subjt:  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND

Query:  ---EEFVSVCNCIPS
           EEF S CNCIPS
Subjt:  ---EEFVSVCNCIPS

A0A5N6RVJ8 VQ domain-containing protein1.47e-1650Show/hide
Query:  TARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEE
        +++   QL+GPRP  L V KSS+     K  KN P P    R R SP+IIYL SPKVIHVRPEEF   VQRLTGN  +  + +S  S+  M+ DE 
Subjt:  TARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEE

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B1.3e-0434.74Show/hide
Query:  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
        GP+P PL V   S   I K      +P P   Q H++          P+ IY  +P++IH  P  F + VQRLTG  S+    +SS S+T    D
Subjt:  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND

Q8LGD5 Protein MKS18.8e-0642.31Show/hide
Query:  QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRH-----RRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSV
        Q+ GPRP PL+V+K S      K    +P P  N+        R P++IY  SPKV+H    EF + VQRLTG  S V
Subjt:  QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRH-----RRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSV

Q9CA36 VQ motif-containing protein 8, chloroplastic5.2e-0644.93Show/hide
Query:  SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTG
        +++ G RP  L +   S T     S K+ P P      R SP+IIY  SPKVIH R E+F + VQRLTG
Subjt:  SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTG

Q9LS54 VQ motif-containing protein 204.4e-0542.19Show/hide
Query:  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTG
        P PP L VNK S  ++ KK    +P   S+    R P+IIY  +P++IH  P++F + VQ+LTG
Subjt:  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding9.0e-0634.74Show/hide
Query:  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
        GP+P PL V   S   I K      +P P   Q H++          P+ IY  +P++IH  P  F + VQRLTG  S+    +SS S+T    D
Subjt:  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND

AT1G21326.1 VQ motif-containing protein1.8e-0636.84Show/hide
Query:  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND
        GPRP PL V   S   I K      +P P   Q H++          P+IIY  SP++IH  P  F + VQRLTG  S+    +S  S+T    D
Subjt:  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND

AT1G68450.1 VQ motif-containing protein3.7e-0744.93Show/hide
Query:  SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTG
        +++ G RP  L +   S T     S K+ P P      R SP+IIY  SPKVIH R E+F + VQRLTG
Subjt:  SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTG

AT3G18360.1 VQ motif-containing protein3.1e-0642.19Show/hide
Query:  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTG
        P PP L VNK S  ++ KK    +P   S+    R P+IIY  +P++IH  P++F + VQ+LTG
Subjt:  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTG

AT3G18690.1 MAP kinase substrate 16.3e-0742.31Show/hide
Query:  QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRH-----RRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSV
        Q+ GPRP PL+V+K S      K    +P P  N+        R P++IY  SPKV+H    EF + VQRLTG  S V
Subjt:  QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRH-----RRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATAACCTCCGCCACCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTTAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAAC
GAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCT
TCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCCGTGTGCAATTGCATT
CCGTCGTAG
mRNA sequenceShow/hide mRNA sequence
AAAAATCTCACCAATTTTCGAAGCCCCACCGGGAAATTGAACAGCAACAATGATGATAACCTCCGCCACCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGC
CATTGACGGTTAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTAC
CTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGC
TACTGGAATGATTAATGATGAGGAATTTGTATCCGTGTGCAATTGCATTCCGTCGTAGCTTCCGCCGTGGATCCGTCGTCGGTTCGGGGGTTATTTGTAGGTGTAGCCGA
GAGAGTGTTTCAGTACTATCACTGATTCTCTAG
Protein sequenceShow/hide protein sequence
MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCI
PS