; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G035360 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G035360
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationGy14Chr3:33906348..33908825
RNA-Seq ExpressionCsGy3G035360
SyntenyCsGy3G035360
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.55e-17590.32Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH
        MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIPI PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_004136640.2 ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus]5.63e-193100Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]3.49e-18796.36Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PKDPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_022935622.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata]1.55e-17590.32Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH
        MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIPI PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]1.40e-17791.64Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKKSEKYDRD+D  EST P+KK   ENEPDEEP KEDFHELEGIPI PKDP +D +AGVIF+LERASLEVAKVGKNYQLLNSDDHSN+L
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        R+NNRNPGDYRPDILHQALLAIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN R
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAV+DDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWN+G
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein8.86e-193100Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP11.69e-18796.36Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PKDPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP11.69e-18796.36Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PKDPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1F634 ribosomal RNA small subunit methyltransferase nep-17.50e-17690.32Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH
        MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIPI PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-16.16e-17589.96Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH
        MVRPFAAKGKKRKK+E+YDRD+D EES + +KK M+ENEPDE+P    A+E+FHELEGIPI PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP17.8e-4847.8Show/hide
Query:  VIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I +LE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL
Subjt:  VIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA
         KLS+ AA   +KL +VIKNPV+ + P  C K+G S S + +  +R   + V     +VFVVGA AHGK+  +YT+ +++IS YPLSA+   A +     
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA

Query:  EKWNV
        E W V
Subjt:  EKWNV

Q06287 Ribosomal RNA small subunit methyltransferase NEP12.1e-4543.04Show/hide
Query:  IPIAPK--DPKNDSNAGVIFILERASLEVAKVGKN------YQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLI
        +P AP     K+     +I +L  ASLE  K+  N      Y LLN DDH   L++  R+  + RPDI HQ LL + DS I KAG+L+ VY++T +G+LI
Subjt:  IPIAPK--DPKNDSNAGVIFILERASLEVAKVGKN------YQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLI

Query:  EIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGK--IETDYT
        E+ P VR+PRT KRF G+M+QLL KLSI +    EKL +VIKNP+T +LP  CRK+  S  +  +++V++Y++ + DD  +   VGAMA GK     +Y 
Subjt:  EIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGK--IETDYT

Query:  DDLLAISEYPLSASCCIADICKDLAEKWNV
        D+ + +S YPLSAS   +  C    + WN+
Subjt:  DDLLAISEYPLSASCCIADICKDLAEKWNV

Q92979 Ribosomal RNA small subunit methyltransferase NEP13.0e-4743.98Show/hide
Query:  EPDEEPAKEDFHELEGIPIAPKDPKNDSNAGV-----IFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRL
        +P E    E   + + +P  PK P+  +   +     I +LE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L
Subjt:  EPDEEPAKEDFHELEGIPIAPKDPKNDSNAGV-----IFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRL

Query:  KVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGA
        + VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL KLS+ AA   +KL +VIKNPV+ + P  C K+G S S   +  VR   + V     +VFVVGA
Subjt:  KVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGA

Query:  MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
         AHGK+  +YT+ +++IS YPLSA+   A +     E W V
Subjt:  MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP11.1e-4644.91Show/hide
Query:  NDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG
        N +   +I +LE A LE  KV   ++LLN DDH+  +R+N R+PG  RPDI HQ LL +FDS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF G
Subjt:  NDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG

Query:  VMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYL-----DAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAS
        +M+QLL K  I A     +L  VIKNP+T ++P  C+K   S S   L   R+ +      +   D  +V V+GA AHG ++TDYT++L +IS YPLSA+
Subjt:  VMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYL-----DAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAS

Query:  CCIADICKDLAEKWNV
           + IC    E W V
Subjt:  CCIADICKDLAEKWNV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-14.7e-4547.03Show/hide
Query:  ILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL
        +LE  SLE AKVG  Y +L+SD H+N+LR+  ++P DYRPDILHQ LL + DS + +AG+L+ V+ +T K +L+++ P  R+PRT  RF G+M+QLL KL
Subjt:  ILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL

Query:  SITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKW
        SI AA   +KL  V+KNPV+ +LP   RKM  S +  +L  + N L A + D  LV ++G +A GKI  DY D    IS YPLSA+   A +   L E W
Subjt:  SITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKW

Query:  NV
         +
Subjt:  NV

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related2.5e-8155.67Show/hide
Query:  MVRPFAAKGKKRK-KSEKYDRDED-------------AEESTSPSKK---VMLENEPDEE-------PAKEDFHELEGIPIAPKDPKNDSNAGVIFILER
        MVRP+  K  KRK + E+YD++ED             A ES+  +KK      E + DEE        A ED   + GIPI    P N   +G++F+LE+
Subjt:  MVRPFAAKGKKRK-KSEKYDRDED-------------AEESTSPSKK---VMLENEPDEE-------PAKEDFHELEGIPIAPKDPKNDSNAGVIFILER

Query:  ASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA
        ASLEVAKVGK YQLLNSDDH+N+L++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PRT KRF G+MLQLLQKLSITA
Subjt:  ASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA

Query:  AGKREKLFRVIKNPVTQ-YLPANCRKMGFSHSSDKLVKVRNYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
           REKL R +KNP+ + +LP N  ++GFSHSS+KLV ++ +L  V  DD D VFVVGAMAHGKI+ +Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Subjt:  AGKREKLFRVIKNPVTQ-YLPANCRKMGFSHSSDKLVKVRNYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGACCATTTGCGGCGAAGGGGAAGAAGAGAAAGAAGTCGGAGAAATACGACAGAGACGAAGATGCCGAAGAATCCACCTCTCCGTCCAAGAAAGTTATGTTGGA
GAACGAACCTGATGAAGAACCAGCCAAGGAGGACTTTCATGAACTTGAAGGTATTCCTATTGCTCCGAAAGACCCCAAGAATGATAGCAATGCTGGTGTTATCTTCATCC
TTGAAAGAGCTTCTCTGGAAGTTGCCAAAGTTGGGAAGAATTACCAGCTGTTGAATTCTGATGACCACTCCAATTATTTGCGGAGGAATAACAGAAATCCTGGGGATTAT
AGACCTGATATCTTGCATCAAGCGCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGAAGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGA
AATTAAACCATACGTTCGTCTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTTGCAATTGCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCT
TTCGGGTGATAAAGAACCCTGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGCTTCTCGCATAGTTCGGATAAGTTGGTCAAGGTGCGAAATTATCTGGATGCT
GTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACTGATTACACGGATGATCTATTAGCAATTTCTGAATATCCTCTTAGTGC
TAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
GCACTAAGCTTCGACTACCGTCAAGGAAGTTCCTGCTCGGACGAACCATGGTTCGACCATTTGCGGCGAAGGGGAAGAAGAGAAAGAAGTCGGAGAAATACGACAGAGAC
GAAGATGCCGAAGAATCCACCTCTCCGTCCAAGAAAGTTATGTTGGAGAACGAACCTGATGAAGAACCAGCCAAGGAGGACTTTCATGAACTTGAAGGTATTCCTATTGC
TCCGAAAGACCCCAAGAATGATAGCAATGCTGGTGTTATCTTCATCCTTGAAAGAGCTTCTCTGGAAGTTGCCAAAGTTGGGAAGAATTACCAGCTGTTGAATTCTGATG
ACCACTCCAATTATTTGCGGAGGAATAACAGAAATCCTGGGGATTATAGACCTGATATCTTGCATCAAGCGCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGA
AGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGAAATTAAACCATACGTTCGTCTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTTGCAATT
GCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCTTTCGGGTGATAAAGAACCCTGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGCTTCT
CGCATAGTTCGGATAAGTTGGTCAAGGTGCGAAATTATCTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACT
GATTACACGGATGATCTATTAGCAATTTCTGAATATCCTCTTAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGAACTCT
GCTTACAACTCCATCAAAATCAGTGCCTCAACTATCTTGTTTCATATGTTTAGTTATTATTTCAGAAAATATGATCCAGCAGAGTTTTTAGGTTTATTAGTGGAACCATA
ATAGATCAATATTCCATTTTTTAAATTAAAATATTAATACCTCTTCTAAATTTAATTGAAAGCATAGAACTTTTAGCTGTAAGAAGTGATTGTACTGAATTTTGTCTGAG
TTCTTTGCTGTTATCACTTGTGAAGTAAAAGTTTCAACTTATTTATGTCCATTCAATAGGTTGAAATTGAAATCGAGGGTATGTAAGAATTGATCCACGAACTCAGTTTT
TTTCCCCTTCCAATATTTGAGATTAGTTGTATTTCAATGGTAACAAAG
Protein sequenceShow/hide protein sequence
MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDY
RPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDA
VKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG