; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G035480 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G035480
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationGy14Chr3:33978985..33979707
RNA-Seq ExpressionCsGy3G035480
SyntenyCsGy3G035480
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017650.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]6.58e-5383.18Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGTF+LLSN YASTGKWREAA+VR K KDKGLKKQPGCSWI+VGN VH FVV DNSHC+ ENIYLLLHDLH KMKKIGHTL+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LTMD NL
Subjt:  LTMDFNL

XP_022983729.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucurbita maxima]1.76e-5383.18Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGTF+LLSN YASTGKWREAA+VR K KDKGLKKQPGCSWI+VGN VH FVV DNSHC+FENIYLLLHDLH KMKKIGHTL+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LT+D NL
Subjt:  LTMDFNL

XP_031739296.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucumis sativus]1.28e-5385.05Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGT+L+LSN YASTGKWREAA VR K KDKGLKKQPGCSWI+VGNTVH FVV DNSH EFENIYLLLHDLHTKMKKIGHTL+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LT+DFNL
Subjt:  LTMDFNL

XP_038906178.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X2 [Benincasa hispida]6.35e-5384.11Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGTFLLLSN YASTGKWREAA VR K KDKGLKKQPGCSWI+VGN VH FVV DNS+ + ENIYLLLHDLHTKMKKIGHTL+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LTMDFNL
Subjt:  LTMDFNL

XP_038906180.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X3 [Benincasa hispida]1.29e-5284.11Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGTFLLLSN YASTGKWREAA VR K KDKGLKKQPGCSWI+VGN VH FVV DNS+ + ENIYLLLHDLHTKMKKIGHTL+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LTMDFNL
Subjt:  LTMDFNL

TrEMBL top hitse value%identityAlignment
A0A0A0LBS7 Uncharacterized protein2.72e-73100Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LTMDFNL
Subjt:  LTMDFNL

A0A0A0LCG2 Uncharacterized protein6.13e-5485.05Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGT+L+LSN YASTGKWREAA VR K KDKGLKKQPGCSWI+VGNTVH FVV DNSH EFENIYLLLHDLHTKMKKIGHTL+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LT+DFNL
Subjt:  LTMDFNL

A0A1S3B8F2 pentatricopeptide repeat-containing protein At2g35030, mitochondrial2.37e-5284.11Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGTFL+LSN YASTGKWREAA VR K KDKGLKKQPGCSWI+VGNTVH FVV DNS+ EFENIY LLHDLHTKMKKIGH L+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LTMDFNL
Subjt:  LTMDFNL

A0A5A7UH59 Pentatricopeptide repeat-containing protein2.37e-5284.11Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGTFL+LSN YASTGKWREAA VR K KDKGLKKQPGCSWI+VGNTVH FVV DNS+ EFENIY LLHDLHTKMKKIGH L+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LTMDFNL
Subjt:  LTMDFNL

A0A6J1J8B4 pentatricopeptide repeat-containing protein At2g35030, mitochondrial8.54e-5483.18Show/hide
Query:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED
        +G  TAE+LLETEPENAGTF+LLSN YASTGKWREAA+VR K KDKGLKKQPGCSWI+VGN VH FVV DNSHC+FENIYLLLHDLH KMKKIGHTL+ED
Subjt:  MGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHED

Query:  LTMDFNL
        LT+D NL
Subjt:  LTMDFNL

SwissProt top hitse value%identityAlignment
O64766 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial1.3e-2052.81Show/hide
Query:  KTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKK
        +  +++LET  ++AGT++L+SN YA+ GK  EAA +R K K+KGLKKQPGCSW+ VG   H FVV D SH +FE +  +L DL  KM+K
Subjt:  KTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKK

O64766 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial6.6e-0432.98Show/hide
Query:  IEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPE-NAGTFLLLSNTYASTGKWREAARVRKKTKDKGL
        + EA+ LFDR D+ KNVVTWTA VSG LRS                 +  AE L +  PE N  ++  + + YA +G+  +A  +  +  ++ +
Subjt:  IEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPE-NAGTFLLLSNTYASTGKWREAARVRKKTKDKGL

Q9FRI5 Pentatricopeptide repeat-containing protein At1g253604.1e-2247.96Show/hide
Query:  DMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH
        +M +GI  A++L    PE+ GT++LLSN +A+TG+W E ARVRK  +D+G+KK+  CSWI++   VH F+VDD SH E E +Y+ L DL  +M+++G+
Subjt:  DMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH

Q9SHZ8 Pentatricopeptide repeat-containing protein At2g220708.6e-2036.88Show/hide
Query:  MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC
        +++EA+   ++     +VVTW     G L S+ R         ++ +G   AE LL  EPEN+G +  L+N Y++ GKW EAA++RK  KD  +KK+ G 
Subjt:  MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC

Query:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH
        SWI+V + VH F V+D +H E   IY+ +  +  ++KK+G+
Subjt:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH

Q9SI53 Pentatricopeptide repeat-containing protein At2g03880, mitochondrial2.1e-1832.62Show/hide
Query:  IEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLP-DMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC
        +++A  L +  +   + VTW            R L G   +  +M +    A++++  +PE+AGT+ LLSN YA++ KW     +R + +D+G+KK+PGC
Subjt:  IEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLP-DMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC

Query:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH
        SWI+V   +HAF++ DNSH +   +   L+ L  ++  IG+
Subjt:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH

Q9ZUT4 Pentatricopeptide repeat-containing protein At2g373201.9e-1941.61Show/hide
Query:  MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC
        +++EA  L +      N V W     G L      LF      D++ GI+ AEE L  EP+ A T + L+N YAS G W+EAA VRK  KDKGLK  PGC
Subjt:  MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC

Query:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMK
        SWI++ N V  F  +D S+C    I  +LH L   M+
Subjt:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMK

Arabidopsis top hitse value%identityAlignment
AT1G25360.1 Pentatricopeptide repeat (PPR) superfamily protein2.9e-2347.96Show/hide
Query:  DMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH
        +M +GI  A++L    PE+ GT++LLSN +A+TG+W E ARVRK  +D+G+KK+  CSWI++   VH F+VDD SH E E +Y+ L DL  +M+++G+
Subjt:  DMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH

AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-1932.62Show/hide
Query:  IEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLP-DMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC
        +++A  L +  +   + VTW            R L G   +  +M +    A++++  +PE+AGT+ LLSN YA++ KW     +R + +D+G+KK+PGC
Subjt:  IEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLP-DMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC

Query:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH
        SWI+V   +HAF++ DNSH +   +   L+ L  ++  IG+
Subjt:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH

AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein6.1e-2136.88Show/hide
Query:  MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC
        +++EA+   ++     +VVTW     G L S+ R         ++ +G   AE LL  EPEN+G +  L+N Y++ GKW EAA++RK  KD  +KK+ G 
Subjt:  MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC

Query:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH
        SWI+V + VH F V+D +H E   IY+ +  +  ++KK+G+
Subjt:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKKIGH

AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein9.4e-2252.81Show/hide
Query:  KTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKK
        +  +++LET  ++AGT++L+SN YA+ GK  EAA +R K K+KGLKKQPGCSW+ VG   H FVV D SH +FE +  +L DL  KM+K
Subjt:  KTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMKK

AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein4.7e-0532.98Show/hide
Query:  IEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPE-NAGTFLLLSNTYASTGKWREAARVRKKTKDKGL
        + EA+ LFDR D+ KNVVTWTA VSG LRS                 +  AE L +  PE N  ++  + + YA +G+  +A  +  +  ++ +
Subjt:  IEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPE-NAGTFLLLSNTYASTGKWREAARVRKKTKDKGL

AT2G37320.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-2041.61Show/hide
Query:  MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC
        +++EA  L +      N V W     G L      LF      D++ GI+ AEE L  EP+ A T + L+N YAS G W+EAA VRK  KDKGLK  PGC
Subjt:  MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGC

Query:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMK
        SWI++ N V  F  +D S+C    I  +LH L   M+
Subjt:  SWIDVGNTVHAFVVDDNSHCEFENIYLLLHDLHTKMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAGGAAGCCAAGACGTTATTTGATAGAAATGATGCTATAAAGAATGTTGTTACTTGGACAGCATGGGTTAGTGGGGGCTTGAGGTCAAGCCTTCGGCACCTGTT
TGGGCAGCTCTTCTTGCCAGATATGTTCATGGGCATAAAAACGGCTGAAGAACTCTTAGAAACAGAGCCAGAGAATGCAGGAACCTTTTTGCTGCTATCTAACACATATG
CTTCAACTGGAAAATGGAGAGAAGCTGCCAGAGTAAGAAAGAAAACCAAGGACAAAGGATTGAAGAAGCAGCCTGGTTGCAGTTGGATAGACGTTGGAAATACAGTGCAT
GCATTCGTAGTGGATGACAATTCTCATTGCGAATTTGAAAATATTTACCTTTTACTTCACGATCTACATACGAAAATGAAGAAGATTGGTCATACATTGCATGAGGATTT
AACAATGGATTTCAATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAGGAAGCCAAGACGTTATTTGATAGAAATGATGCTATAAAGAATGTTGTTACTTGGACAGCATGGGTTAGTGGGGGCTTGAGGTCAAGCCTTCGGCACCTGTT
TGGGCAGCTCTTCTTGCCAGATATGTTCATGGGCATAAAAACGGCTGAAGAACTCTTAGAAACAGAGCCAGAGAATGCAGGAACCTTTTTGCTGCTATCTAACACATATG
CTTCAACTGGAAAATGGAGAGAAGCTGCCAGAGTAAGAAAGAAAACCAAGGACAAAGGATTGAAGAAGCAGCCTGGTTGCAGTTGGATAGACGTTGGAAATACAGTGCAT
GCATTCGTAGTGGATGACAATTCTCATTGCGAATTTGAAAATATTTACCTTTTACTTCACGATCTACATACGAAAATGAAGAAGATTGGTCATACATTGCATGAGGATTT
AACAATGGATTTCAATTTATGA
Protein sequenceShow/hide protein sequence
MIEEAKTLFDRNDAIKNVVTWTAWVSGGLRSSLRHLFGQLFLPDMFMGIKTAEELLETEPENAGTFLLLSNTYASTGKWREAARVRKKTKDKGLKKQPGCSWIDVGNTVH
AFVVDDNSHCEFENIYLLLHDLHTKMKKIGHTLHEDLTMDFNL