CuGenDBv2

Gene ID	CsGy3G038190
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	CDT1-like protein a
Genome location	Gy14Chr3:35937272..35939085
RNA-Seq Expression	CsGy3G038190
Synteny	CsGy3G038190
Gene Ontology terms	GO:0000076 - DNA replication checkpoint (biological process) GO:0000278 - mitotic cell cycle (biological process) GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process) GO:0071163 - DNA replication preinitiation complex assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0070182 - DNA polymerase binding (molecular function)
InterPro domains	IPR014939 - CDT1 Geminin-binding domain-like IPR036390 - Winged helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0051017.1 CDT1-like protein b [Cucumis melo var. makuwa]

5.60e-99

62.22

Show/hide

Query:  MAGASNKISSPSS-TLPFKSNKNVSSNSTSLLKDPQSSS---------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR
        MA AS KISS SS TLPFK  K + SN  SLL+D QS S         L  R+R RK VALSIKEV++AA+SV E N QL P DL TE  K VRR++DS 
Subjt:  MAGASNKISSPSS-TLPFKSNKNVSSNSTSLLKDPQSSS---------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR

Query:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP
        SNESQS       V+NK S KLPEKFE+LCKFF  L+ AMRLLRCKGVASNFSNVC K+E LTDRRFSY HLAQ KFILPEAIV+KKV V+DE T   KP
Subjt:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP

Query:  EFHISFNFGVLAVDSKENHYRQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQG
        + HISFNF VL  ++KE+ Y QLRKLFR +LSEF+       DVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI  NH+SEENQG
Subjt:  EFHISFNFGVLAVDSKENHYRQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQG

Query:  FPMIKSTMTGHGPNK
        F ++KSTM+  G +K
Subjt:  FPMIKSTMTGHGPNK

XP_004151978.3 CDT1-like protein a, chloroplastic [Cucumis sativus]

7.46e-127

72.67

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQS S        ER RKRK VALSIKEV++AAQSVHE N QL  HDLTT GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI
        QSS S  TCVDNK SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFS+VC+KIEVLTDRRFSYSHLAQLKFILPEAI++KKV VFDE T+  KP+ HI
Subjt:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI

Query:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI
        SFNFGVL  +SKE+ Y QLRKLFR +LSEF      IDD+P       FNFR+ +L  +T +LS VKTSIEQLAP QP+PSA+ I SNH+SE NQGF +I
Subjt:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI

Query:  KSTMTGHGPNK
        KSTMTGHGPNK
Subjt:  KSTMTGHGPNK

XP_008447443.1 PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo]

8.81e-122

71.38

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA AS+ ISSPSSTLPFKS KN+ SN  SLLKDPQS S        ERTRKRK VALSIKEV+RAAQSV+E N QL PHDLTT+GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI
         SS S  TCVD K SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFSNVC+KIEVLTDRRFSY+HLAQLKFILPEAI++KKV VFDE T+  KP+ HI
Subjt:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI

Query:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI
        SFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+ SNH+ EENQGF +I
Subjt:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI

Query:  KSTMTGHGPNK
        KST   HGPNK
Subjt:  KSTMTGHGPNK

XP_031737520.1 CDT1-like protein a, chloroplastic [Cucumis sativus]

2.40e-125

72.03

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQS S        ER RKRK VALSIKEV++AAQSVHE N QL  HDLTT GSK+VRR+MDS S ES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI
        QSS S  TCVDNK SNK PEKFELLCKFFDCL+ AMRLLR KGVASNFS+VC+KIEVLTDRRFSYSHLAQLKFILPEAI++KKV VFDE T+  KP+ HI
Subjt:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI

Query:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI
        SFNFGVL  +SKE+ Y QLRKLFR +LSEF      IDD+P       FNFR+ +L  +T +LS VKTSIEQLAP QP+PSA+ I SNH+SE NQGF +I
Subjt:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI

Query:  KSTMTGHGPNK
        KSTMTGHGPNK
Subjt:  KSTMTGHGPNK

XP_031739146.1 CDT1-like protein a, chloroplastic [Cucumis sativus]

4.00e-192

94.31

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQS S        ERTRKRKKVALSI+EVERAAQSVHE NSQLLPHDLTTEGSKVVRRRMDSRSNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI
        QSSSS+STCVDNK+SNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFS+VCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE HI
Subjt:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI

Query:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMIKSTMTGHGPNK
        SFNFGVLAVDSKENHY QLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFP+IKSTMTGHGPNK
Subjt:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMIKSTMTGHGPNK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7I7 CDT1 domain-containing protein

4.65e-125

72.03

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQS S        ER RKRK VALSIKEV++AAQSVHE N QL  HDLTT GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI
        QSS S  TCVDNK SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFS+VC+KIEVLTDRRFSYSHLAQLKFILPEAI++KKV VF   T+  KP+ HI
Subjt:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI

Query:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI
        SFNFGVL  +SKE+ Y QLRKLFR +LSEF      IDD+P       FNFR+ +L  +T +LS VKTSIEQLAP QP+PSA+ I SNH+SE NQGF +I
Subjt:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI

Query:  KSTMTGHGPNK
        KSTMTGHGPNK
Subjt:  KSTMTGHGPNK

A0A1S3BGW9 CDT1-like protein a, chloroplastic

4.27e-122

71.38

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA AS+ ISSPSSTLPFKS KN+ SN  SLLKDPQS S        ERTRKRK VALSIKEV+RAAQSV+E N QL PHDLTT+GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI
         SS S  TCVD K SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFSNVC+KIEVLTDRRFSY+HLAQLKFILPEAI++KKV VFDE T+  KP+ HI
Subjt:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI

Query:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI
        SFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+ SNH+ EENQGF +I
Subjt:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI

Query:  KSTMTGHGPNK
        KST   HGPNK
Subjt:  KSTMTGHGPNK

A0A1S3CEP6 CDT1-like protein b

2.71e-99

62.22

Show/hide

Query:  MAGASNKISSPSS-TLPFKSNKNVSSNSTSLLKDPQSSS---------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR
        MA AS KISS SS TLPFK  K + SN  SLL+D QS S         L  R+R RK VALSIKEV++AA+SV E N QL P DL TE  K VRR++DS 
Subjt:  MAGASNKISSPSS-TLPFKSNKNVSSNSTSLLKDPQSSS---------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR

Query:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP
        SNESQS       V+NK S KLPEKFE+LCKFF  L+ AMRLLRCKGVASNFSNVC K+E LTDRRFSY HLAQ KFILPEAIV+KKV V+DE T   KP
Subjt:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP

Query:  EFHISFNFGVLAVDSKENHYRQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQG
        + HISFNF VL  ++KE+ Y QLRKLFR +LSEF+       DVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI  NH+SEENQG
Subjt:  EFHISFNFGVLAVDSKENHYRQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQG

Query:  FPMIKSTMTGHGPNK
        F ++KSTM+  G +K
Subjt:  FPMIKSTMTGHGPNK

A0A5A7T8X4 CDT1-like protein a

4.27e-122

71.38

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA AS+ ISSPSSTLPFKS KN+ SN  SLLKDPQS S        ERTRKRK VALSIKEV+RAAQSV+E N QL PHDLTT+GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLW------ERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI
         SS S  TCVD K SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFSNVC+KIEVLTDRRFSY+HLAQLKFILPEAI++KKV VFDE T+  KP+ HI
Subjt:  QSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHI

Query:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI
        SFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+ SNH+ EENQGF +I
Subjt:  SFNFGVLAVDSKENHYRQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMI

Query:  KSTMTGHGPNK
        KST   HGPNK
Subjt:  KSTMTGHGPNK

A0A5D3BZJ0 CDT1-like protein b

2.71e-99

62.22

Show/hide

Query:  MAGASNKISSPSS-TLPFKSNKNVSSNSTSLLKDPQSSS---------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR
        MA AS KISS SS TLPFK  K + SN  SLL+D QS S         L  R+R RK VALSIKEV++AA+SV E N QL P DL TE  K VRR++DS 
Subjt:  MAGASNKISSPSS-TLPFKSNKNVSSNSTSLLKDPQSSS---------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR

Query:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP
        SNESQS       V+NK S KLPEKFE+LCKFF  L+ AMRLLRCKGVASNFSNVC K+E LTDRRFSY HLAQ KFILPEAIV+KKV V+DE T   KP
Subjt:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP

Query:  EFHISFNFGVLAVDSKENHYRQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQG
        + HISFNF VL  ++KE+ Y QLRKLFR +LSEF+       DVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI  NH+SEENQG
Subjt:  EFHISFNFGVLAVDSKENHYRQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQG

Query:  FPMIKSTMTGHGPNK
        F ++KSTM+  G +K
Subjt:  FPMIKSTMTGHGPNK

SwissProt top hits

e value

%identity

Alignment

Q9M1S9 CDT1-like protein b

7.8e-22

47.41

Show/hide

Query:  KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHISFNFGVLAVDSK--EN
        KLPE+FE+L +FF+ L+ A+RLL+ KG ++ ++N+C KIE LT+R FSY HLAQ+K I PEAI +K+V  F E T   KP  HI  N   + V+      
Subjt:  KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHISFNFGVLAVDSK--EN

Query:  HYRQLRKLFRIQLSEF
         Y +LRK+F  +L +F
Subjt:  HYRQLRKLFRIQLSEF

Q9SJW9 CDT1-like protein a, chloroplastic

4.4e-25

35.03

Show/hide

Query:  ISSPSS--TLPFKSNKNV---SSNSTSLLKDPQSSS------------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR
        +S+P S  ++PFKS K +   S +S S   +P  SS            +  R+R R  VALS+KE+ +AA       S+    D     +K       S 
Subjt:  ISSPSS--TLPFKSNKNV---SSNSTSLLKDPQSSS------------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR

Query:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP
        S+ S+  SSN     N    KLPEK+E L KFF+ L+ +M L + +G    FSN+  +IE LT+RRF YSHLAQ+K ILPEAI +K+V + DE T   KP
Subjt:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP

Query:  EFHISFNFGVLAVDSK---ENHYRQLRKLFRIQLSEFI------DDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISS
        + H++ N   +  + K   E+    LRK+FR +L++F+      D+VP       FN R + + +    +  V + +E++A    +P++K  SS
Subjt:  EFHISFNFGVLAVDSK---ENHYRQLRKLFRIQLSEFI------DDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISS

Arabidopsis top hits

e value

%identity

Alignment

AT2G31270.1 homolog of yeast CDT1 A

3.2e-26

35.03

Show/hide

Query:  ISSPSS--TLPFKSNKNV---SSNSTSLLKDPQSSS------------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR
        +S+P S  ++PFKS K +   S +S S   +P  SS            +  R+R R  VALS+KE+ +AA       S+    D     +K       S 
Subjt:  ISSPSS--TLPFKSNKNV---SSNSTSLLKDPQSSS------------LWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSR

Query:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP
        S+ S+  SSN     N    KLPEK+E L KFF+ L+ +M L + +G    FSN+  +IE LT+RRF YSHLAQ+K ILPEAI +K+V + DE T   KP
Subjt:  SNESQSSSSNSTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKP

Query:  EFHISFNFGVLAVDSK---ENHYRQLRKLFRIQLSEFI------DDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISS
        + H++ N   +  + K   E+    LRK+FR +L++F+      D+VP       FN R + + +    +  V + +E++A    +P++K  SS
Subjt:  EFHISFNFGVLAVDSK---ENHYRQLRKLFRIQLSEFI------DDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISS

AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B

5.6e-23

47.41

Show/hide

Query:  KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHISFNFGVLAVDSK--EN
        KLPE+FE+L +FF+ L+ A+RLL+ KG ++ ++N+C KIE LT+R FSY HLAQ+K I PEAI +K+V  F E T   KP  HI  N   + V+      
Subjt:  KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHISFNFGVLAVDSK--EN

Query:  HYRQLRKLFRIQLSEF
         Y +LRK+F  +L +F
Subjt:  HYRQLRKLFRIQLSEF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGGTGCTTCAAACAAGATTTCTTCACCTTCATCAACTTTACCCTTCAAATCCAACAAAAATGTGAGCTCCAACTCCACATCATTGCTTAAGGATCCGCAGTCTTC
GAGTCTCTGGGAGCGAACTAGGAAACGGAAGAAGGTTGCGCTTTCCATTAAAGAGGTTGAACGAGCTGCTCAGAGCGTCCATGAATTTAATAGTCAGTTGCTGCCTCATG
ATCTGACCACTGAAGGGAGTAAAGTAGTTAGAAGACGGATGGATTCGCGGTCGAATGAAAGTCAATCTAGTAGCTCCAATAGTACTTGTGTTGATAATAAGTTCTCCAAT
AAATTGCCTGAGAAATTTGAGCTGCTGTGTAAGTTCTTTGATTGCTTGAATTTTGCAATGCGGTTGTTACGATGTAAAGGTGTAGCCTCCAACTTCTCCAACGTTTGCTC
TAAAATTGAAGTCCTCACTGATAGGAGGTTTTCATACAGTCATTTGGCTCAACTGAAGTTTATTTTACCTGAAGCAATTGTGGTTAAGAAAGTTGCGGTCTTTGATGAGT
GTACCAACTGGAAGAAGCCAGAATTTCATATATCTTTCAATTTTGGTGTCCTAGCTGTAGACAGTAAGGAAAACCATTATAGGCAATTGAGGAAGTTGTTTAGGATACAG
CTTTCAGAATTTATTGATGACGTTCCAGCATTCAATTTCAGAACCCAAGATCTTCTCTCAAAAACCAAGACGTTATCTTATGTCAAGACATCAATTGAGCAACTAGCGCC
TGGGCAACCAATGCCATCAGCAAAAGGCATTTCCTCTAATCATAATTCAGAAGAAAATCAAGGTTTCCCAATGATTAAATCTACCATGACTGGTCATGGCCCAAATAAAT
AG

mRNA sequence

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Protein sequence

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MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSSSLWERTRKRKKVALSIKEVERAAQSVHEFNSQLLPHDLTTEGSKVVRRRMDSRSNESQSSSSNSTCVDNKFSN
KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPEFHISFNFGVLAVDSKENHYRQLRKLFRIQ
LSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPMIKSTMTGHGPNK

CsGy3G038190 (gene) of Cucumber (Gy14) v2.1 genome