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CsGy3G041265 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G041265
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTPD1 protein-like protein 1-like
Genome locationGy14Chr3:38590839..38591426
RNA-Seq ExpressionCsGy3G041265
SyntenyCsGy3G041265
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60075.1 hypothetical protein Csa_001952 [Cucumis sativus]2.84e-86100Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVACS
        SFTYAWDNAFPFSPLFSQVACS
Subjt:  SFTYAWDNAFPFSPLFSQVACS

XP_022137438.1 uncharacterized protein LOC111008881 isoform X1 [Momordica charantia]4.54e-4254.55Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        M  S+  F +L  F LL KGNC+CS+ +I++SQS TG +V GK +WR TI N C CSQ S+  DC G+ TVE VD +IL  A +VCL N+G+P+  S+PI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVAC
        SFTYAWDN +PF+PL S   C
Subjt:  SFTYAWDNAFPFSPLFSQVAC

XP_022137447.1 uncharacterized protein LOC111008881 isoform X2 [Momordica charantia]1.84e-4153.72Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        M   +  F +L  F LL KGNC+CS+ +I++SQS TG +V GK +WR TI N C CSQ S+  DC G+ TVE VD +IL  A +VCL N+G+P+  S+PI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVAC
        SFTYAWDN +PF+PL S   C
Subjt:  SFTYAWDNAFPFSPLFSQVAC

XP_022141896.1 uncharacterized protein At1g05835-like [Momordica charantia]2.73e-5063.11Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        MVASI     LFFFCLLSKGNC+CS+ DI I Q  T + V G+QEW  T+ N CVCSQY+VK DC GF++ E VD S L   G+ CL+N G+PIF S PI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVACS
        SFTYAWD  FPF PL SQVACS
Subjt:  SFTYAWDNAFPFSPLFSQVACS

XP_038896903.1 TPD1 protein homolog 1-like [Benincasa hispida]7.24e-7184.43Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        MVASI +  +LFFFCLLSKG  +CSMNDI ISQSTTG+EVNGKQEWRATI N CVCSQYSVKFDCNGFN+VEKVDESILMVAGS CLVNNGQP+F S+PI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVACS
        SFTYAWDNAF F PLFSQVACS
Subjt:  SFTYAWDNAFPFSPLFSQVACS

TrEMBL top hitse value%identityAlignment
A0A0A0LDN0 Uncharacterized protein1.37e-86100Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVACS
        SFTYAWDNAFPFSPLFSQVACS
Subjt:  SFTYAWDNAFPFSPLFSQVACS

A0A0A0LEA1 Uncharacterized protein3.88e-5972.13Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        MVASI +  +LFFFCLLSKGNCEC +NDI ISQ+TTG  V GKQ W+ATI N C+C Q S+K DCNGFNTV+ VD SIL V+GSVCLVN GQPIF S+PI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVACS
        SFTYA DNAFPF PL SQ++CS
Subjt:  SFTYAWDNAFPFSPLFSQVACS

A0A6J1C8A1 uncharacterized protein LOC111008881 isoform X28.92e-4253.72Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        M   +  F +L  F LL KGNC+CS+ +I++SQS TG +V GK +WR TI N C CSQ S+  DC G+ TVE VD +IL  A +VCL N+G+P+  S+PI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVAC
        SFTYAWDN +PF+PL S   C
Subjt:  SFTYAWDNAFPFSPLFSQVAC

A0A6J1CAC8 uncharacterized protein LOC111008881 isoform X12.20e-4254.55Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        M  S+  F +L  F LL KGNC+CS+ +I++SQS TG +V GK +WR TI N C CSQ S+  DC G+ TVE VD +IL  A +VCL N+G+P+  S+PI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVAC
        SFTYAWDN +PF+PL S   C
Subjt:  SFTYAWDNAFPFSPLFSQVAC

A0A6J1CKK7 uncharacterized protein At1g05835-like1.32e-5063.11Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        MVASI     LFFFCLLSKGNC+CS+ DI I Q  T + V G+QEW  T+ N CVCSQY+VK DC GF++ E VD S L   G+ CL+N G+PIF S PI
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQVACS
        SFTYAWD  FPF PL SQVACS
Subjt:  SFTYAWDNAFPFSPLFSQVACS

SwissProt top hitse value%identityAlignment
Q6TLJ2 Protein TAPETUM DETERMINANT 19.6e-0629.13Show/hide
Query:  ECSMNDIEISQSTTGREVNGKQEWRATIRNKCV--CSQYSVKFDCNGFNTVEKVDESIL-MVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQV
        +C   DI ++Q+ T    NG   +   I N+C+  C    +  +C  F++ + ++  +   +    CLVNNG+P+   S +SF YA  N FP+    + V
Subjt:  ECSMNDIEISQSTTGREVNGKQEWRATIRNKCV--CSQYSVKFDCNGFNTVEKVDESIL-MVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQV

Query:  ACS
         C+
Subjt:  ACS

Arabidopsis top hitse value%identityAlignment
AT4G24972.1 tapetum determinant 16.8e-0729.13Show/hide
Query:  ECSMNDIEISQSTTGREVNGKQEWRATIRNKCV--CSQYSVKFDCNGFNTVEKVDESIL-MVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQV
        +C   DI ++Q+ T    NG   +   I N+C+  C    +  +C  F++ + ++  +   +    CLVNNG+P+   S +SF YA  N FP+    + V
Subjt:  ECSMNDIEISQSTTGREVNGKQEWRATIRNKCV--CSQYSVKFDCNGFNTVEKVDESIL-MVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQV

Query:  ACS
         C+
Subjt:  ACS

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.3e-1331.93Show/hide
Query:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI
        M  ++  F ++    ++S G C C+   I+I    TGRE+ G+ EW+ T+ N C C Q  V   C GF   + V   +L   G+ CL+  G  +   +  
Subjt:  MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPI

Query:  SFTYAWDNAFPFSPLFSQV
         FTYA    + F P+ S+V
Subjt:  SFTYAWDNAFPFSPLFSQV

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein8.9e-1532.74Show/hide
Query:  LLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKC-VCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDN
        L+ F   +++G  +C +N + + QS TG+ V  K EW   + N C  C     K  C GF +V  V  S+L  +G +CL+N G  IF      F Y WD 
Subjt:  LLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKC-VCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDN

Query:  AFPFSPLFSQVAC
        +F    +   + C
Subjt:  AFPFSPLFSQVAC

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.1e-1634.51Show/hide
Query:  LLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKC-VCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDN
        L+ F   +++G  +CS+N + + QS TG+ V  K EW   + N C  C   + +  C GFN+V  +D S+L+ +G  CLVN G+ I     I F Y WD 
Subjt:  LLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKC-VCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDN

Query:  AFPFSPLFSQVAC
        +F    +   + C
Subjt:  AFPFSPLFSQVAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCCTCCATCAACTACTTTTATCTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGGAATTGCGAATGCTCGATGAATGACATAGAAATAAGTCAAAGTACAACTGG
AAGAGAAGTGAATGGGAAGCAAGAATGGAGAGCAACAATCAGAAACAAATGTGTTTGTTCTCAATACAGTGTGAAATTTGATTGCAATGGGTTTAACACAGTTGAAAAGG
TTGATGAATCCATACTAATGGTTGCTGGGTCAGTGTGTTTGGTTAACAATGGTCAACCAATCTTCAACTCATCACCAATCTCCTTCACTTATGCTTGGGATAATGCCTTC
CCTTTCAGCCCTCTCTTCTCTCAAGTTGCCTGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCCTCCATCAACTACTTTTATCTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGGAATTGCGAATGCTCGATGAATGACATAGAAATAAGTCAAAGTACAACTGG
AAGAGAAGTGAATGGGAAGCAAGAATGGAGAGCAACAATCAGAAACAAATGTGTTTGTTCTCAATACAGTGTGAAATTTGATTGCAATGGGTTTAACACAGTTGAAAAGG
TTGATGAATCCATACTAATGGTTGCTGGGTCAGTGTGTTTGGTTAACAATGGTCAACCAATCTTCAACTCATCACCAATCTCCTTCACTTATGCTTGGGATAATGCCTTC
CCTTTCAGCCCTCTCTTCTCTCAAGTTGCCTGTTCTTAG
Protein sequenceShow/hide protein sequence
MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAF
PFSPLFSQVACS