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CsGy3G041470 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G041470
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionEthylene-responsive transcription factor SHINE 2-like
Genome locationGy14Chr3:38763869..38765124
RNA-Seq ExpressionCsGy3G041470
SyntenyCsGy3G041470
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038810.1 ethylene-responsive transcription factor SHINE 2-like [Cucumis melo var. makuwa]8.79e-8593.01Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q
        MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD D AHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS Q
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q

Query:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
        EAD      GDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
Subjt:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

XP_004136348.1 ethylene-responsive transcription factor SHINE 2 [Cucumis sativus]6.73e-97100Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE
        MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE

Query:  ADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
        ADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
Subjt:  ADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

XP_008466408.1 PREDICTED: ethylene-responsive transcription factor SHINE 2-like [Cucumis melo]1.45e-8392.31Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q
        MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD D AHIGVWQKRAGTRATSNWVMRIELGKKEVPS ESTS Q
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q

Query:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
        EAD      GDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
Subjt:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

XP_038899931.1 ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hispida]1.18e-8189.58Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ES
        MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD DNAHIGVWQKRAGTRATSNWVMRIELGKK+VPSP    ES
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ES

Query:  TSQEADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPST
        TSQEADGDG      H+N IDEEDRIAMQMIEELLNWNCPLPST
Subjt:  TSQEADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPST

XP_038899932.1 ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida]7.12e-8289.58Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ES
        MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD DNAHIGVWQKRAGTRATSNWVMRIELGKK+VPSP    ES
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ES

Query:  TSQEADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPST
        TSQEADGDG      H+N IDEEDRIAMQMIEELLNWNCPLPST
Subjt:  TSQEADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPST

TrEMBL top hitse value%identityAlignment
A0A0A0LJA8 AP2/ERF domain-containing protein3.26e-97100Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE
        MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE

Query:  ADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
        ADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
Subjt:  ADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

A0A1S3CR71 ethylene-responsive transcription factor SHINE 2-like7.04e-8492.31Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q
        MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD D AHIGVWQKRAGTRATSNWVMRIELGKKEVPS ESTS Q
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q

Query:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
        EAD      GDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
Subjt:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

A0A5A7T6E0 Ethylene-responsive transcription factor SHINE 2-like4.25e-8593.01Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q
        MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD D AHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS Q
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q

Query:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
        EAD      GDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
Subjt:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

A0A5D3E5T0 Ethylene-responsive transcription factor SHINE 2-like7.04e-8492.31Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q
        MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD D AHIGVWQKRAGTRATSNWVMRIELGKKEVPS ESTS Q
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-Q

Query:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
        EAD      GDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
Subjt:  EADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

A0A6J1FE08 ethylene-responsive transcription factor SHINE 3 isoform X32.52e-7985.62Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ES
        MNGQNAKTNFPASKD S EASHGHGSSPM+PKALSELLSTKLRKCCKNPSPSLTCLRLD DNAHIGVWQKRAGTRATSNWVMRIELGKKE+PSP    ES
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ES

Query:  TSQEADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS
        TSQE DG        H+N IDEEDRIAMQMIEELLNWNCPLPS SS
Subjt:  TSQEADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

SwissProt top hitse value%identityAlignment
Q3E958 Ethylene-responsive transcription factor SHINE 37.9e-2853.28Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE
        MNGQ+AKTNFP  K +    S    S+  SPK+LSELL+ KLRK CK+ +P LTCLRLD D++HIGVWQKRAG++ + NWV  +ELG K    P      
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE

Query:  ADGDGDGDGDDHQNE-IDEEDRIAMQMIEELLNWNCP
          GD + +    +NE + E+D++AMQMIEELLNW CP
Subjt:  ADGDGDGDGDDHQNE-IDEEDRIAMQMIEELLNWNCP

Q9LFN7 Ethylene-responsive transcription factor SHINE 27.9e-2853.24Show/hide
Query:  MNGQNAKTNFPASKDHSEEAS---HGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPEST
        MNGQNAKTNFP  K  SEE S       S  MSPK+LSELL+ KLRK CK+ +PSLTCLRLD D++HIGVWQKRAG++ +  WVMR+ELG     S    
Subjt:  MNGQNAKTNFPASKDHSEEAS---HGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPEST

Query:  SQEADGDGDGDGDDHQNE--IDEEDRIAMQMIEELLNWN
                + + ++ + E  I +ED++AM+MIEELLNW+
Subjt:  SQEADGDGDGDGDDHQNE--IDEEDRIAMQMIEELLNWN

Q9XI33 Ethylene-responsive transcription factor WIN11.6e-2848.37Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHG--------SSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVP
        M+G+NAKTNFP + +++ E S G          SS  S  +LS +LS KLRKCCK+PSPSLTCLRLD  ++HIGVWQKRAG+++ S+WVM +ELG     
Subjt:  MNGQNAKTNFPASKDHSEEASHGHG--------SSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVP

Query:  SPESTSQEADGDGDGD-----------GDDHQNEIDEEDRIAMQMIEELLNWN
         P S+SQE       D           G   +  +DEE+++A+QMIEELLN N
Subjt:  SPESTSQEADGDGDGD-----------GDDHQNEIDEEDRIAMQMIEELLNWN

Arabidopsis top hitse value%identityAlignment
AT1G15360.1 Integrase-type DNA-binding superfamily protein1.1e-2948.37Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHG--------SSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVP
        M+G+NAKTNFP + +++ E S G          SS  S  +LS +LS KLRKCCK+PSPSLTCLRLD  ++HIGVWQKRAG+++ S+WVM +ELG     
Subjt:  MNGQNAKTNFPASKDHSEEASHGHG--------SSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVP

Query:  SPESTSQEADGDGDGD-----------GDDHQNEIDEEDRIAMQMIEELLNWN
         P S+SQE       D           G   +  +DEE+++A+QMIEELLN N
Subjt:  SPESTSQEADGDGDGD-----------GDDHQNEIDEEDRIAMQMIEELLNWN

AT5G11190.1 Integrase-type DNA-binding superfamily protein5.6e-2953.24Show/hide
Query:  MNGQNAKTNFPASKDHSEEAS---HGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPEST
        MNGQNAKTNFP  K  SEE S       S  MSPK+LSELL+ KLRK CK+ +PSLTCLRLD D++HIGVWQKRAG++ +  WVMR+ELG     S    
Subjt:  MNGQNAKTNFPASKDHSEEAS---HGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPEST

Query:  SQEADGDGDGDGDDHQNE--IDEEDRIAMQMIEELLNWN
                + + ++ + E  I +ED++AM+MIEELLNW+
Subjt:  SQEADGDGDGDGDDHQNE--IDEEDRIAMQMIEELLNWN

AT5G25390.1 Integrase-type DNA-binding superfamily protein5.6e-2953.28Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE
        MNGQ+AKTNFP  K +    S    S+  SPK+LSELL+ KLRK CK+ +P LTCLRLD D++HIGVWQKRAG++ + NWV  +ELG K    P      
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE

Query:  ADGDGDGDGDDHQNE-IDEEDRIAMQMIEELLNWNCP
          GD + +    +NE + E+D++AMQMIEELLNW CP
Subjt:  ADGDGDGDGDDHQNE-IDEEDRIAMQMIEELLNWNCP

AT5G25390.2 Integrase-type DNA-binding superfamily protein5.6e-2953.28Show/hide
Query:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE
        MNGQ+AKTNFP  K +    S    S+  SPK+LSELL+ KLRK CK+ +P LTCLRLD D++HIGVWQKRAG++ + NWV  +ELG K    P      
Subjt:  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQE

Query:  ADGDGDGDGDDHQNE-IDEEDRIAMQMIEELLNWNCP
          GD + +    +NE + E+D++AMQMIEELLNW CP
Subjt:  ADGDGDGDGDDHQNE-IDEEDRIAMQMIEELLNWNCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCACTCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCT
ACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGACTCGACTGTGACAACGCTCATATCGGTGTATGGCAGAAGCGTGCAGGCA
CTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGGCGATGGCGATGGTGAT
GACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAA
mRNA sequenceShow/hide mRNA sequence
CACTGGTTGCAAATTGCTCTGTTACTCTCATTTTCTGTCTCCTGCCCATAACGTGTTTGTTGATTTGCTTGGAATAAACTTTGGCGTCTGTGGCGGCGGATATTTTTGCA
GATTTGTACAACCCAATTGTTGAAGAGAAGGGTGTGGCTAGGGACATTCGACACGGCGGAGGATGCAGCACGAGCGTACGATCAAGCAGCCATTTTAATGAATGGCCAAA
ACGCCAAGACCAATTTCCCTGCATCAAAAGACCACTCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAG
CTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGACTCGACTGTGACAACGCTCATATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTC
CAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGGCGATGGCGATGGTGATGACCACCAAAATG
AAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAAGTACAGGATCTCAACACAAAACTC
TACTCCCAAAATTTAAAAATAAAAAAATAACACCCATTAGATTAAAACAAAGAGGCTTAATTAATCTGTGTTTGACTGTCTATGTGTGTATGTATATATTCATATATGTT
TTTATTCCTATTTTTCTGTTACTTTCAGCTTATATATAAAGCTGTTTATGGGACTTGGGAAGCTCAAAATCTGTATAGAGACGGAGCTTTTGCATATACATAAGTTTGCT
GTTTTATGTCATCTTTTGTAATTCACATATATATATTTGGAAAAGGTATATATAATATAAAG
Protein sequenceShow/hide protein sequence
MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGD
DHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS