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CsGy3G041480 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G041480
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCoatomer subunit zeta
Genome locationGy14Chr3:38770288..38774598
RNA-Seq ExpressionCsGy3G041480
SyntenyCsGy3G041480
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
InterPro domainsIPR011012 - Longin-like domain superfamily
IPR039652 - Coatomer subunit zeta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038809.1 SNARE-like superfamily protein [Cucumis melo var. makuwa]1.31e-8097.58Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGD+AVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
XP_004136347.1 TSET complex member tstD [Cucumis sativus]7.90e-82100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
XP_008466411.1 PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo]9.22e-8198.39Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
XP_022134177.1 uncharacterized protein LOC111006502 [Momordica charantia]2.64e-8097.58Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
XP_038896955.1 TSET complex member tstD [Benincasa hispida]2.64e-8097.58Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        +PTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
TrEMBL top hitse value%identityAlignment
A0A0A0LHA5 Coatomer subunit zeta3.82e-82100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
A0A1S3CRC6 Coatomer subunit zeta4.46e-8198.39Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
A0A5A7TBS4 Coatomer subunit zeta6.34e-8197.58Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGD+AVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
A0A5D3E691 Coatomer subunit zeta4.46e-8198.39Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
A0A6J1BYX2 Coatomer subunit zeta1.28e-8097.58Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWT
        APTERLFLDKYGKICLCLDEIVWT
Subjt:  APTERLFLDKYGKICLCLDEIVWT
SwissProt top hitse value%identityAlignment
C0HLF1 TSET complex member tstD4.1e-1333.06Show/hide
Query:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDAC-
        M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V        V+T +GD+ +++ G +E DELAL++V F I  ++KD C 
Subjt:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDAC-

Query:  GKAPTERLFLDKYGKICLCLDEIV
         K  TE+ F+++  K  L LDEI+
Subjt:  GKAPTERLFLDKYGKICLCLDEIV
Q5NA06 Coatomer subunit zeta-33.5e-0426.27Show/hide
Query:  VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTE
        +L+ +S G  +  +++          ++F   + A   K +   E  +    S ++VY  + D+  +V G DE +EL LA V+   + AI          
Subjt:  VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTE

Query:  RLFLDKYGKICLCLDEIV
        R  L+    I LCLDE+V
Subjt:  RLFLDKYGKICLCLDEIV
Arabidopsis top hitse value%identityAlignment
AT1G15370.1 SNARE-like superfamily protein2.8e-5782.11Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVYIVYT LGDV++++VGKDEYDELALAE I++IT+A+KD CGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVW
         PTER+FLDKYG+ICLCLDEIVW
Subjt:  APTERLFLDKYGKICLCLDEIVW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTGGCTGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTTTCATGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCT
GGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATTTGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGCTCTTGGCGATGTTGCAGTTTATGTTGTTG
GGAAGGACGAATATGATGAATTGGCTTTGGCAGAAGTGATCTTTGTAATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTCGACAAA
TATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGTATGCCCTTCTTTTCTCCCTCACTCAAAATCTTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
CGAACAAGTTGAGCCACTTGATCGAACAAGTTGAGTGATAGATAGAATTATATTGAGTTGATGTGTAGAGCTATTGTAATTCACAAATATGGTTCCATTATCTCTGTTTC
CAAACAATCCCTAATTGGTGCCTTAAAGAACAAAAACGAAAAACAGGTGCGAGAGAAAATCTGGGAATCTAATATTCATTTCGAAGCTTCGAATTTTCCCATCCGAAATT
CCGATCGGAGAGTTGAAATCTGACTGCGAGAGATCACCCATGTTGCTGGCTGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTTTCATGGAGTTCCGGC
AGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATTTGTTGCTTCACACAAGTCTGTATATATTG
TTTACACTGCTCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAATATGATGAATTGGCTTTGGCAGAAGTGATCTTTGTAATAACATCAGCGATAAAGGATGCC
TGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTCGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGTATGCCCTTCTTTTCTCCCTCACTCAAA
ATCTTTCTTCTAGGTCTTAATCCAACCAGATATAGTGATAGACATACTAAAAACATAGAAAGATCTGCAATTCAAGAAATTTCTTCTGTCACAATTCGATCCTTGGATTT
CAATCTAAGATTATTTTGACTGTACTAGTGCTCTTACTGATCTGATACGATGTTTGTGAAGGGCATCTTGGAAAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGT
TAAAACCTCCCAATGAGTTTTGATCAATGAAACGGATGCACACTATCTTGTTGGTTGCTGCTTTCAACTATTTTACTCAACTTATGCCAAAGAATTGTTTCAAGCACTGT
GGAATTTCCATCGTGATCGATAAGTTTACTTTACTTACCTATTCTATTTGGCTCTCATACCTGAACTTTATCGGACCCATTCAGTTTGTAAGTTAGAACTTGAAGATGTG
TAAAGAATTGAAGATTTGATCAAGATTTTGATACTGGGAACAAACTAGTTTATTGAGTGATTTTGAAATAGTTAAAATCACTTTTGTTATATTTAAATATACGTTTTTAA
TCCCTCAAAATTAGTTTAGGGTTTGATTAGCCACACATGCCCTACATTCGTATATTGCAGTGGAATCGTGGAGTAAATTTGTAGTATTCTATCAATTTGCTTCACAACTA
ACTGTGGTTGGATAAGATGGTTGATGCGTATGAGCTCATCCGTCCTAGTGGCCCTTTGAACATTAGTAATACGACTTTGAAGGAGATGAGTTCTAATTACAGCGATCTTT
CTGTTTAGTAGTTAATGTTTAATCAAATTTTAGTAGGTTTAGACCGTTATCTCGATGCAGATACGTTTACGTTTACTTCTCACACACGGGAGAAATCTTTTTTAGTGCTA
ATATAAATTGTTTGTTTGAACCAAATTTCATTTTATCGTAATACTAAAATATTTCTATGTTATTGTTGGTAATAAAAAAATACGAATTGAATCGATCAAGTTTAGTTGAT
ATACTTGGTGGAAGAAAACACTCCTTTTTCTTTTTCCCGACTTGAACGTCTAATTATCATTTCCACTTTTGTAATGTTAAAAGAAATAGATCACGCCAATCATCGTTAAG
TAGCTATGTTCATGTTGTCCATAATTAATATTTTGAAGTTATATTACCTCCACCATAACGTGTCGTTATACTTAAATAAAAGAGCTAAAATACGTCTAATTAACTTGTAC
TCTTTTTTTTTATTACAACAACTATGGTGATGCAAAATCAAACTTCTCATATGAGAAAAATATCCCGTCGATTACTACTTTTTTGAACACACAATATTGGAGCTTTGTAC
TGTTATGGGAGAAAAGTACGAAACAATCCATCCACAGAAAGAAAAGTTGAGATAATGGTGGTGATTAGGTTTTTATTGGCAGCTTCTTCACAAAACTCCGACTCAAACTT
TAAAGGAAGAAATCCATTGGAGGAACTTCCAATCATCGATGCTATAATTTCTT
Protein sequenceShow/hide protein sequence
MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDK
YGKICLCLDEIVWTVCPSFLPHSKSFF