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CsGy3G042845 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G042845
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRNase H domain-containing protein
Genome locationGy14Chr3:39857823..39858320
RNA-Seq ExpressionCsGy3G042845
SyntenyCsGy3G042845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038679.1 hypothetical protein E6C27_scaffold92G002210 [Cucumis melo var. makuwa]2.65e-3065.91Show/hide
Query:  MTSESPRSQEIWMASNADFWKFNLDASWNDVEEIT------------FILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLI
        MTSES RSQ+IWM+    FW+FNLDASWNDVEEI+            FILA C R EVKWP EVLEALA  RGL V+SDYFGHE VLI
Subjt:  MTSESPRSQEIWMASNADFWKFNLDASWNDVEEIT------------FILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLI
KGN60244.1 hypothetical protein Csa_002227 [Cucumis sativus]1.90e-83100Show/hide
Query:  MLMTSESPRSQEIWMASNADFWKFNLDASWNDVEEITFILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLIWLWNLIVAHHPSRIAVWGLEEF
        MLMTSESPRSQEIWMASNADFWKFNLDASWNDVEEITFILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLIWLWNLIVAHHPSRIAVWGLEEF
Subjt:  MLMTSESPRSQEIWMASNADFWKFNLDASWNDVEEITFILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLIWLWNLIVAHHPSRIAVWGLEEF

Query:  FFSRHNDMVRILCNI
        FFSRHNDMVRILCNI
Subjt:  FFSRHNDMVRILCNI
TrEMBL top hitse value%identityAlignment
A0A0A0LGW5 Uncharacterized protein9.18e-84100Show/hide
Query:  MLMTSESPRSQEIWMASNADFWKFNLDASWNDVEEITFILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLIWLWNLIVAHHPSRIAVWGLEEF
        MLMTSESPRSQEIWMASNADFWKFNLDASWNDVEEITFILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLIWLWNLIVAHHPSRIAVWGLEEF
Subjt:  MLMTSESPRSQEIWMASNADFWKFNLDASWNDVEEITFILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLIWLWNLIVAHHPSRIAVWGLEEF

Query:  FFSRHNDMVRILCNI
        FFSRHNDMVRILCNI
Subjt:  FFSRHNDMVRILCNI
A0A5D3E6P6 RNase H domain-containing protein1.28e-3065.91Show/hide
Query:  MTSESPRSQEIWMASNADFWKFNLDASWNDVEEIT------------FILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLI
        MTSES RSQ+IWM+    FW+FNLDASWNDVEEI+            FILA C R EVKWP EVLEALA  RGL V+SDYFGHE VLI
Subjt:  MTSESPRSQEIWMASNADFWKFNLDASWNDVEEIT------------FILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATGACAAGCGAGAGCCCAAGAAGTCAGGAGATTTGGATGGCGTCTAATGCTGATTTTTGGAAGTTCAACTTGGATGCTTCTTGGAATGATGTTGAGGAGATCAC
CTTTATCCTAGCTGGTTGTGCGAGAGTGGAGGTTAAATGGCCTAAAGAGGTTCTTGAAGCATTAGCCAGGATTAGAGGTTTGAGTGTACATTCTGATTACTTCGGTCATG
AGTATGTTCTCATATGGTTGTGGAATCTGATTGTTGCTCATCACCCAAGTCGCATTGCTGTTTGGGGATTAGAAGAGTTTTTTTTTTCTAGGCATAATGATATGGTTAGG
ATCCTGTGTAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATGACAAGCGAGAGCCCAAGAAGTCAGGAGATTTGGATGGCGTCTAATGCTGATTTTTGGAAGTTCAACTTGGATGCTTCTTGGAATGATGTTGAGGAGATCAC
CTTTATCCTAGCTGGTTGTGCGAGAGTGGAGGTTAAATGGCCTAAAGAGGTTCTTGAAGCATTAGCCAGGATTAGAGGTTTGAGTGTACATTCTGATTACTTCGGTCATG
AGTATGTTCTCATATGGTTGTGGAATCTGATTGTTGCTCATCACCCAAGTCGCATTGCTGTTTGGGGATTAGAAGAGTTTTTTTTTTCTAGGCATAATGATATGGTTAGG
ATCCTGTGTAATATTTGA
Protein sequenceShow/hide protein sequence
MLMTSESPRSQEIWMASNADFWKFNLDASWNDVEEITFILAGCARVEVKWPKEVLEALARIRGLSVHSDYFGHEYVLIWLWNLIVAHHPSRIAVWGLEEFFFSRHNDMVR
ILCNI