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CsGy3G043050 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G043050
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGeranylgeranyl transferase type-2 subunit alpha
Genome locationGy14Chr3:40011182..40011830
RNA-Seq ExpressionCsGy3G043050
SyntenyCsGy3G043050
Gene Ontology termsGO:0018342 - protein prenylation (biological process)
GO:0008318 - protein prenyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038661.1 geranylgeranyl transferase type-2 subunit alpha [Cucumis melo var. makuwa]3.31e-1783.67Show/hide
Query:  RLKVFCVRTSSRRVVSSKMDFEQGAFVHRSGVANARNFYAWNYRTYLLA
        +LKV CVRTSSRRVVSSKMDFEQGAFVHRSGVANA+NF AWNYR  + A
Subjt:  RLKVFCVRTSSRRVVSSKMDFEQGAFVHRSGVANARNFYAWNYRTYLLA
TrEMBL top hitse value%identityAlignment
A0A0A0LE25 Geranylgeranyl transferase type-2 subunit alpha1.92e-60100Show/hide
Query:  MCLVTQHYCPLLILATDFGSVDPSFDRLKVFCVRTSSRRVVSSKMDFEQGAFVHRSGVANARNFYAWNYRTYLLAFFRFSPSRLIAAVCMYILK
        MCLVTQHYCPLLILATDFGSVDPSFDRLKVFCVRTSSRRVVSSKMDFEQGAFVHRSGVANARNFYAWNYRTYLLAFFRFSPSRLIAAVCMYILK
Subjt:  MCLVTQHYCPLLILATDFGSVDPSFDRLKVFCVRTSSRRVVSSKMDFEQGAFVHRSGVANARNFYAWNYRTYLLAFFRFSPSRLIAAVCMYILK
A0A5D3E6U6 Geranylgeranyl transferase type-2 subunit alpha1.60e-1783.67Show/hide
Query:  RLKVFCVRTSSRRVVSSKMDFEQGAFVHRSGVANARNFYAWNYRTYLLA
        +LKV CVRTSSRRVVSSKMDFEQGAFVHRSGVANA+NF AWNYR  + A
Subjt:  RLKVFCVRTSSRRVVSSKMDFEQGAFVHRSGVANARNFYAWNYRTYLLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTGGTAACTCAACACTATTGTCCATTGTTAATTCTGGCCACTGATTTTGGTTCTGTCGATCCATCTTTTGATAGGCTGAAAGTTTTCTGCGTCAGAACGTCAAG
TCGGCGTGTGGTATCATCGAAAATGGATTTTGAACAAGGAGCATTCGTCCACCGATCAGGAGTTGCGAACGCCAGGAATTTTTATGCATGGAACTACAGAACGTACCTGC
TTGCATTCTTCCGATTCAGTCCTTCTAGGCTGATAGCCGCAGTTTGCATGTACATTTTAAAGGATAGTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTGGTAACTCAACACTATTGTCCATTGTTAATTCTGGCCACTGATTTTGGTTCTGTCGATCCATCTTTTGATAGGCTGAAAGTTTTCTGCGTCAGAACGTCAAG
TCGGCGTGTGGTATCATCGAAAATGGATTTTGAACAAGGAGCATTCGTCCACCGATCAGGAGTTGCGAACGCCAGGAATTTTTATGCATGGAACTACAGAACGTACCTGC
TTGCATTCTTCCGATTCAGTCCTTCTAGGCTGATAGCCGCAGTTTGCATGTACATTTTAAAGGATAGTACTTAG
Protein sequenceShow/hide protein sequence
MCLVTQHYCPLLILATDFGSVDPSFDRLKVFCVRTSSRRVVSSKMDFEQGAFVHRSGVANARNFYAWNYRTYLLAFFRFSPSRLIAAVCMYILKDST