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CsGy3G044560 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G044560
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCytochrome c oxidase
Genome locationGy14Chr3:41243994..41245861
RNA-Seq ExpressionCsGy3G044560
SyntenyCsGy3G044560
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465918.1 PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo]9.93e-9590.07Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRD--NKVVMDEGVGTAPSDIRFPFTNQTRHCYA
        MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQTN    DD RR GSED+D  NKVVMDEGV TAPSD+RFPFTNQTRHCYA
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRD--NKVVMDEGVGTAPSDIRFPFTNQTRHCYA

Query:  RYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        RYLEYHRCVQKKGEHAPECKKFA YYRSLCPGEWVEKWNEQRELGVFPGP+
Subjt:  RYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

XP_022932983.1 cytochrome c oxidase subunit 6b-3-like [Cucurbita moschata]1.67e-7881.02Show/hide
Query:  RSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGE
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSSSS  SAQTNLDGN D RR G +D+D+KVV++EGV TAP+D+RFPFTNQTRHCY RYLEYH  +QKKGE
Subjt:  RSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGE

Query:  HAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        HAPEC KFAKYYRSLCP EW+EKWNEQRELG+FPGP+
Subjt:  HAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

XP_031737980.1 putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus]1.41e-93100Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
        MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWV
        LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWV
Subjt:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWV

XP_031737981.1 cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus]1.40e-108100Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
        MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
Subjt:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

XP_038886888.1 putative cytochrome c oxidase subunit 6b-like [Benincasa hispida]7.03e-9789.26Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
        MSA+Q+DPHDKMRSRD+SKV RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRG ED DNK   DEG+ TAP+D+RFPFTNQTRHCYARY
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        LEYHRCVQK+GEHAPECKKFAKYYRSLCPGEW+EKWNEQRELGVFPGP+
Subjt:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

TrEMBL top hitse value%identityAlignment
A0A0A0LEH8 Uncharacterized protein6.79e-109100Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
        MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
Subjt:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

A0A1S3CQ05 putative cytochrome c oxidase subunit 6b-like4.81e-9590.07Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRD--NKVVMDEGVGTAPSDIRFPFTNQTRHCYA
        MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQTN    DD RR GSED+D  NKVVMDEGV TAPSD+RFPFTNQTRHCYA
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRD--NKVVMDEGVGTAPSDIRFPFTNQTRHCYA

Query:  RYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        RYLEYHRCVQKKGEHAPECKKFA YYRSLCPGEWVEKWNEQRELGVFPGP+
Subjt:  RYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

A0A5D3E4S8 Putative cytochrome c oxidase subunit 6b-like4.81e-9590.07Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRD--NKVVMDEGVGTAPSDIRFPFTNQTRHCYA
        MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQTN    DD RR GSED+D  NKVVMDEGV TAPSD+RFPFTNQTRHCYA
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRD--NKVVMDEGVGTAPSDIRFPFTNQTRHCYA

Query:  RYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        RYLEYHRCVQKKGEHAPECKKFA YYRSLCPGEWVEKWNEQRELGVFPGP+
Subjt:  RYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

A0A6J1F3D0 cytochrome c oxidase subunit 6b-3-like8.08e-7981.02Show/hide
Query:  RSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGE
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSSSS  SAQTNLDGN D RR G +D+D+KVV++EGV TAP+D+RFPFTNQTRHCY RYLEYH  +QKKGE
Subjt:  RSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGE

Query:  HAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        HAPEC KFAKYYRSLCP EW+EKWNEQRELG+FPGP+
Subjt:  HAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

A0A6J1IE20 cytochrome c oxidase subunit 6b-3-like3.63e-7376.81Show/hide
Query:  RSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSS-VPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKG
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSSSS   SAQTNLDGN +  R G +D   KVV++EGV TAP+D+RFPFTNQTRHCY RYLEYH C+QKKG
Subjt:  RSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSS-VPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKG

Query:  EHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        EH PEC KFAKYYRSLCP +W+EKWNEQRELG+FPG +
Subjt:  EHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

SwissProt top hitse value%identityAlignment
O94581 Cytochrome c oxidase subunit 12, mitochondrial2.9e-2050.59Show/hide
Query:  SEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        SE  D +       GT   D RFP TNQT+HC+  Y++Y RC++ KGE    CK+F   Y+SLCP EWVE+W+EQRE G FP P+
Subjt:  SEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

Q945L0 Cytochrome c oxidase subunit 6b-22.2e-2870Show/hide
Query:  TAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        TAP+D RFP TNQTRHC+ RY+E+HRC   KGE + +C++FAKYYR+LCPGEWV+KWNEQRE G FPGP+
Subjt:  TAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

Q9LPJ2 Putative cytochrome c oxidase subunit 6b-like2.0e-2646.67Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
        MS++Q+DPHDKMRSRD+SKVARG+QAPRPAH  GTVS  PPP + +   A           +RG   R+    ++E         RFP TN+TRHC+ R+
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEK
        ++YH+C++K G  A +C     Y RS+CP E V K
Subjt:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEK

Q9S7L9 Cytochrome c oxidase subunit 6b-14.9e-2847.66Show/hide
Query:  RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFA
        + E AP         S+ P  +  +        + N+D+    SE+   +   +  + TAP+D RFP TNQTRHC+ RY+EYHRCV  KG+ APEC KFA
Subjt:  RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFA

Query:  KYYRSLCPGEWVEKWNEQRELGVFPGPM
        K+YRSLCP EWV++WNEQRE G FPGP+
Subjt:  KYYRSLCPGEWVEKWNEQRELGVFPGPM

Q9SUD3 Cytochrome c oxidase subunit 6b-34.4e-2972.86Show/hide
Query:  TAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        TAP+D RFP TNQTRHC+ RY+E+HRC   KGE A EC++FAKYYR+LCPGEWV+KWNEQRE G FPGP+
Subjt:  TAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

Arabidopsis top hitse value%identityAlignment
AT1G22450.1 cytochrome C oxidase 6B3.5e-2947.66Show/hide
Query:  RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFA
        + E AP         S+ P  +  +        + N+D+    SE+   +   +  + TAP+D RFP TNQTRHC+ RY+EYHRCV  KG+ APEC KFA
Subjt:  RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFA

Query:  KYYRSLCPGEWVEKWNEQRELGVFPGPM
        K+YRSLCP EWV++WNEQRE G FPGP+
Subjt:  KYYRSLCPGEWVEKWNEQRELGVFPGPM

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein1.5e-2746.67Show/hide
Query:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY
        MS++Q+DPHDKMRSRD+SKVARG+QAPRPAH  GTVS  PPP + +   A           +RG   R+    ++E         RFP TN+TRHC+ R+
Subjt:  MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEK
        ++YH+C++K G  A +C     Y RS+CP E V K
Subjt:  LEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEK

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein3.1e-3072.86Show/hide
Query:  TAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        TAP+D RFP TNQTRHC+ RY+E+HRC   KGE A EC++FAKYYR+LCPGEWV+KWNEQRE G FPGP+
Subjt:  TAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein1.6e-2970Show/hide
Query:  TAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM
        TAP+D RFP TNQTRHC+ RY+E+HRC   KGE + +C++FAKYYR+LCPGEWV+KWNEQRE G FPGP+
Subjt:  TAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCGTCTCAGATAGATCCTCACGACAAGATGAGATCTAGAGACATGAGCAAGGTGGCACGTGGCGAACAAGCACCAAGGCCAGCTCATGAATACGGCACCGTTTC
AAAGCCTCCACCGCCTTCTTCCTCCTCCGTTCCTTCCGCTCAGACCAACCTCGACGGCAACGACGATGATCGCCGCCGCGGTAGTGAAGACAGAGATAATAAGGTGGTAA
TGGATGAGGGAGTAGGGACAGCGCCAAGCGATATTCGTTTTCCTTTCACTAATCAAACTCGCCATTGCTATGCACGATATTTGGAATATCATAGGTGCGTGCAGAAGAAG
GGGGAACACGCACCTGAATGCAAGAAGTTCGCCAAGTATTATCGATCTCTATGTCCTGGTGAATGGGTTGAGAAATGGAATGAGCAAAGGGAGCTTGGGGTCTTTCCTGG
TCCAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCGTCTCAGATAGATCCTCACGACAAGATGAGATCTAGAGACATGAGCAAGGTGGCACGTGGCGAACAAGCACCAAGGCCAGCTCATGAATACGGCACCGTTTC
AAAGCCTCCACCGCCTTCTTCCTCCTCCGTTCCTTCCGCTCAGACCAACCTCGACGGCAACGACGATGATCGCCGCCGCGGTAGTGAAGACAGAGATAATAAGGTGGTAA
TGGATGAGGGAGTAGGGACAGCGCCAAGCGATATTCGTTTTCCTTTCACTAATCAAACTCGCCATTGCTATGCACGATATTTGGAATATCATAGGTGCGTGCAGAAGAAG
GGGGAACACGCACCTGAATGCAAGAAGTTCGCCAAGTATTATCGATCTCTATGTCCTGGTGAATGGGTTGAGAAATGGAATGAGCAAAGGGAGCTTGGGGTCTTTCCTGG
TCCAATGTAA
Protein sequenceShow/hide protein sequence
MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDDRRRGSEDRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKK
GEHAPECKKFAKYYRSLCPGEWVEKWNEQRELGVFPGPM