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CsGy3G044580 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G044580
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRibosomal_L30 domain-containing protein
Genome locationGy14Chr3:41278291..41278641
RNA-Seq ExpressionCsGy3G044580
SyntenyCsGy3G044580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60438.1 hypothetical protein Csa_002032 [Cucumis sativus]1.69e-73100Show/hide
Query:  MSYLKMKLNQTLLQFASHFAFLRLRRQSFVFVFVFGASPSSSSFVNSSFVFLLHEFTWVRLLHSWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAIL
        MSYLKMKLNQTLLQFASHFAFLRLRRQSFVFVFVFGASPSSSSFVNSSFVFLLHEFTWVRLLHSWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAIL
Subjt:  MSYLKMKLNQTLLQFASHFAFLRLRRQSFVFVFVFGASPSSSSFVNSSFVFLLHEFTWVRLLHSWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAIL

Query:  ILIVDLLFLFLDRNRG
        ILIVDLLFLFLDRNRG
Subjt:  ILIVDLLFLFLDRNRG
TrEMBL top hitse value%identityAlignment
A0A0A0LC45 Ribosomal_L30 domain-containing protein6.76e-2064.56Show/hide
Query:  NSSFVFLLHEFTWVRL----LH----SWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAILILIVDLLFLFLDRNRG
        + SFVF++ +F ++RL    +H    +WV SP S+L SPFVAIRH PFSVGSFAAKFS Q I ILIVDLLFLFLDRN G
Subjt:  NSSFVFLLHEFTWVRL----LH----SWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAILILIVDLLFLFLDRNRG
A0A0A0LF89 Uncharacterized protein8.17e-74100Show/hide
Query:  MSYLKMKLNQTLLQFASHFAFLRLRRQSFVFVFVFGASPSSSSFVNSSFVFLLHEFTWVRLLHSWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAIL
        MSYLKMKLNQTLLQFASHFAFLRLRRQSFVFVFVFGASPSSSSFVNSSFVFLLHEFTWVRLLHSWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAIL
Subjt:  MSYLKMKLNQTLLQFASHFAFLRLRRQSFVFVFVFGASPSSSSFVNSSFVFLLHEFTWVRLLHSWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAIL

Query:  ILIVDLLFLFLDRNRG
        ILIVDLLFLFLDRNRG
Subjt:  ILIVDLLFLFLDRNRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTTAAAAATGAAATTAAATCAAACCCTCCTGCAGTTCGCTTCGCACTTCGCATTCCTTCGTCTTCGGCGCCAGTCCTTCGTTTTCGTTTTCGTCTTCGGCGC
CAGTCCTTCGTCTTCGTCCTTCGTTAATTCTTCATTCGTCTTCCTCCTACACGAGTTCACGTGGGTTCGTCTTCTTCATTCGTGGGTTCGTTCTCCACTCTCCGTTCTCC
ACTCTCCGTTCGTCGCCATTCGCCATTTTCCGTTCTCTGTGGGTTCGTTCGCTGCAAAATTTTCAGGCCAGGCCATCTTGATTCTCATCGTGGATCTTCTCTTTCTCTTC
TTGGATCGAAATCGCGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATTTAAAAATGAAATTAAATCAAACCCTCCTGCAGTTCGCTTCGCACTTCGCATTCCTTCGTCTTCGGCGCCAGTCCTTCGTTTTCGTTTTCGTCTTCGGCGC
CAGTCCTTCGTCTTCGTCCTTCGTTAATTCTTCATTCGTCTTCCTCCTACACGAGTTCACGTGGGTTCGTCTTCTTCATTCGTGGGTTCGTTCTCCACTCTCCGTTCTCC
ACTCTCCGTTCGTCGCCATTCGCCATTTTCCGTTCTCTGTGGGTTCGTTCGCTGCAAAATTTTCAGGCCAGGCCATCTTGATTCTCATCGTGGATCTTCTCTTTCTCTTC
TTGGATCGAAATCGCGGGTAA
Protein sequenceShow/hide protein sequence
MSYLKMKLNQTLLQFASHFAFLRLRRQSFVFVFVFGASPSSSSFVNSSFVFLLHEFTWVRLLHSWVRSPLSVLHSPFVAIRHFPFSVGSFAAKFSGQAILILIVDLLFLF
LDRNRG