; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G001100 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G001100
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionE3 ubiquitin-protein ligase RNF181-like protein
Genome locationGy14Chr4:684156..684719
RNA-Seq ExpressionCsGy4G001100
SyntenyCsGy4G001100
Gene Ontology termsGO:0031507 - heterochromatin assembly (biological process)
GO:0048587 - regulation of short-day photoperiodism, flowering (biological process)
GO:0070734 - histone H3-K27 methylation (biological process)
GO:0005677 - chromatin silencing complex (cellular component)
GO:0031519 - PcG protein complex (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52856.2 hypothetical protein Csa_014722 [Cucumis sativus]6.56e-11598.2Show/hide
Query:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR
        FGNGVLEVQLSYLERAISVSSFSQR LYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIAS+VAHMCNGNTGWNSNFYVIARVDLVR
Subjt:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR

Query:  VIRIEEQPRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSS
        VIRIEEQPRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWL+S
Subjt:  VIRIEEQPRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSS

XP_004144954.1 uncharacterized protein LOC101214496 [Cucumis sativus]1.40e-5450.97Show/hide
Query:  GNGVLEVQLSYLERAISVSSFSQR---TLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASYVAHMCNGNTGWNSNFYVIAR
        GNGVL+V +S++++ ISVS  + R    L++T   P++NALFYLS+ QLQ PLF+I Q L SLNIR    + +AR+IAS++  M + N+   +NF+++A 
Subjt:  GNGVLEVQLSYLERAISVSSFSQR---TLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASYVAHMCNGNTGWNSNFYVIAR

Query:  VDLVRVIRI----------------EEQPRAEGWRGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS
        VD +R+I +                +E P A   RGV V R  +L+SEE   E GDCS+CLDEL CEKREV+RIPCGHVYHESCIFKWL + NSCPLCR 
Subjt:  VDLVRVIRI----------------EEQPRAEGWRGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS

Query:  SFPLHN
          PLH+
Subjt:  SFPLHN

XP_016899530.1 PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo]4.29e-5652.45Show/hide
Query:  GNGVLEVQLSYLERAISVSSFSQRT---LYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASYVAHMCNGNTGWNSNFYVIAR
        GNG+LEV++S+ E+ IS+S  + R    L++T   P++NAL YL++ QLQ PLF+I QFL SLNIR    +++ARQIAS++  M + N   + NF++IA 
Subjt:  GNGVLEVQLSYLERAISVSSFSQRT---LYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASYVAHMCNGNTGWNSNFYVIAR

Query:  VDLVRVI--RIEEQPRAEGW--------------RGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS
        VD +RVI   +EEQ    G               RGV   R  +LKSEE   + GDCS+CLDEL CEKREVIRIPCGHVYHESCIFKWL + NSCPLCR 
Subjt:  VDLVRVI--RIEEQPRAEGW--------------RGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS

Query:  SFPL
          PL
Subjt:  SFPL

XP_016901482.1 PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo]4.11e-9875Show/hide
Query:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR
        FGNGVLE+QLSY+ER IS+SS SQR LYETQP PFNNA FYLSVH LQ PLF+IRQFL+SLNIRRE IARQIASYVAHMCNGNTG NSNFYVIARVDLVR
Subjt:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR

Query:  VIRIEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSF
         IRIEE+                     PRA   RGV V ERL KLKSEEE+GDCSVCLDELDC KREVIRIPCGHVYHESCIF+WL+++NSCPLCR+SF
Subjt:  VIRIEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSF

Query:  PLHN
        PL N
Subjt:  PLHN

XP_038883574.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]6.37e-6557.28Show/hide
Query:  GNGVLEVQLSYLERAISVSSFS---QRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNI---RRETIARQIASYVAHMCNGNTGWNSNFYVIAR
        GNGVLEVQ SY ER ISVS  +    R L+ET   PF+NALFYLS+HQLQ+PLF+I QFL SLNI     E +ARQIASY+  M N N    SNF +IA 
Subjt:  GNGVLEVQLSYLERAISVSSFS---QRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNI---RRETIARQIASYVAHMCNGNTGWNSNFYVIAR

Query:  VDLVRVIRIEEQ-------------------PRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS
        VD  RVI +EE                    P   G   VAVER+ +LKS+EE GDC +CL+EL CEKREVIRIPCGHVYHESC+FKWL  +NSCPLCR 
Subjt:  VDLVRVIRIEEQ-------------------PRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS

Query:  SFPLHN
          PL++
Subjt:  SFPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KYC0 RING-type domain-containing protein3.36e-13198.38Show/hide
Query:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR
        FGNGVLEVQLSYLERAISVSSFSQR LYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIAS+VAHMCNGNTGWNSNFYVIARVDLVR
Subjt:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR

Query:  VIRIEEQPRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFPLHNVTN
        VIRIEEQPRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWL+SSNSCPLCRSSFPLHNVTN
Subjt:  VIRIEEQPRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFPLHNVTN

A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like2.08e-5652.45Show/hide
Query:  GNGVLEVQLSYLERAISVSSFSQRT---LYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASYVAHMCNGNTGWNSNFYVIAR
        GNG+LEV++S+ E+ IS+S  + R    L++T   P++NAL YL++ QLQ PLF+I QFL SLNIR    +++ARQIAS++  M + N   + NF++IA 
Subjt:  GNGVLEVQLSYLERAISVSSFSQRT---LYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASYVAHMCNGNTGWNSNFYVIAR

Query:  VDLVRVI--RIEEQPRAEGW--------------RGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS
        VD +RVI   +EEQ    G               RGV   R  +LKSEE   + GDCS+CLDEL CEKREVIRIPCGHVYHESCIFKWL + NSCPLCR 
Subjt:  VDLVRVI--RIEEQPRAEGW--------------RGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS

Query:  SFPL
          PL
Subjt:  SFPL

A0A1S4DZR1 uncharacterized protein LOC1079912691.99e-9875Show/hide
Query:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR
        FGNGVLE+QLSY+ER IS+SS SQR LYETQP PFNNA FYLSVH LQ PLF+IRQFL+SLNIRRE IARQIASYVAHMCNGNTG NSNFYVIARVDLVR
Subjt:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR

Query:  VIRIEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSF
         IRIEE+                     PRA   RGV V ERL KLKSEEE+GDCSVCLDELDC KREVIRIPCGHVYHESCIF+WL+++NSCPLCR+SF
Subjt:  VIRIEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSF

Query:  PLHN
        PL N
Subjt:  PLHN

A0A5A7TLM1 E3 ubiquitin-protein ligase RNF181-like protein1.99e-9875Show/hide
Query:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR
        FGNGVLE+QLSY+ER IS+SS SQR LYETQP PFNNA FYLSVH LQ PLF+IRQFL+SLNIRRE IARQIASYVAHMCNGNTG NSNFYVIARVDLVR
Subjt:  FGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVR

Query:  VIRIEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSF
         IRIEE+                     PRA   RGV V ERL KLKSEEE+GDCSVCLDELDC KREVIRIPCGHVYHESCIF+WL+++NSCPLCR+SF
Subjt:  VIRIEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSF

Query:  PLHN
        PL N
Subjt:  PLHN

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein2.08e-5652.45Show/hide
Query:  GNGVLEVQLSYLERAISVSSFSQRT---LYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASYVAHMCNGNTGWNSNFYVIAR
        GNG+LEV++S+ E+ IS+S  + R    L++T   P++NAL YL++ QLQ PLF+I QFL SLNIR    +++ARQIAS++  M + N   + NF++IA 
Subjt:  GNGVLEVQLSYLERAISVSSFSQRT---LYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASYVAHMCNGNTGWNSNFYVIAR

Query:  VDLVRVI--RIEEQPRAEGW--------------RGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS
        VD +RVI   +EEQ    G               RGV   R  +LKSEE   + GDCS+CLDEL CEKREVIRIPCGHVYHESCIFKWL + NSCPLCR 
Subjt:  VDLVRVI--RIEEQPRAEGW--------------RGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS

Query:  SFPL
          PL
Subjt:  SFPL

SwissProt top hitse value%identityAlignment
Q3T0W3 E3 ubiquitin-protein ligase RNF1814.9e-0941.43Show/hide
Query:  AVERLSK--LKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFPLHNVT
        AVE L +  ++  + +  C VCL E + E+   I +PC H++H +CI  WLS +NSCPLCR   P  + T
Subjt:  AVERLSK--LKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFPLHNVT

Q5M974 E3 ubiquitin-protein ligase RNF1811.1e-0846.27Show/hide
Query:  VERLSKLKSEEEKGD----CSVCLDELDCEKREVIR-IPCGHVYHESCIFKWLSSSNSCPLCRSSFP
        VE L K+    E+ D    C VCL  L+ E+ E +R +PC H++H SCI  WL  +NSCPLCR   P
Subjt:  VERLSKLKSEEEKGD----CSVCLDELDCEKREVIR-IPCGHVYHESCIFKWLSSSNSCPLCRSSFP

Q6AXU4 E3 ubiquitin-protein ligase RNF1814.9e-0946.43Show/hide
Query:  LKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFP
        ++S + +  C VCL E + E+  VI +PC H++H +CI  WLS +NSCPLCR   P
Subjt:  LKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFP

Q9CY62 E3 ubiquitin-protein ligase RNF1814.9e-0946.88Show/hide
Query:  VERLSKLKSEEEKGD--CSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFP
        VE L +      K D  C VCL E + E+  VI +PC H++H +CI  WLS +NSCPLCR   P
Subjt:  VERLSKLKSEEEKGD--CSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFP

Q9P0P0 E3 ubiquitin-protein ligase RNF1811.1e-0842.03Show/hide
Query:  VERLSK--LKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFPLHNVT
        VE L +  ++  + +  C VCL E + E+   I +PC H++H SCI  WLS +NSCPLCR   P  + T
Subjt:  VERLSK--LKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFPLHNVT

Arabidopsis top hitse value%identityAlignment
AT1G35330.1 RING/U-box superfamily protein2.2e-0945.83Show/hide
Query:  DCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFP
        +C++CL+E + E+   +  PC H +H SCI  WLSS ++CP+CR+S P
Subjt:  DCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFP

AT3G19950.1 RING/U-box superfamily protein2.2e-0938.33Show/hide
Query:  RLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFP
        +++K   + E   C+VC+DE + +  +V ++PC HV+H+ C+  WL   NSCP+CR   P
Subjt:  RLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFP

AT4G05350.1 RING/U-box superfamily protein1.7e-0929.82Show/hide
Query:  ETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVRVIRIEEQPRAEGWRG-VAVERLSKLKSEEEKGDCSVCLDEL--DCEKREVIRIPCGHVYHESCIF
        + +A +I++    +  G+ G+            V V+  +E+       G +  E    LK E E   CS+CL+ L    + R+V R+ C HV+H  C+ 
Subjt:  ETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVRVIRIEEQPRAEGWRG-VAVERLSKLKSEEEKGDCSVCLDEL--DCEKREVIRIPCGHVYHESCIF

Query:  KWLSSSNSCPLCRS
        +WL   N+CPLCR+
Subjt:  KWLSSSNSCPLCRS

AT4G12190.1 RING/U-box superfamily protein1.7e-0941.27Show/hide
Query:  VAVERLSKLKSEEEKGDCSVCLDEL--DCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS
        +  E L  LK E E   CS+CL+ L    + R++ R+ C HV+H  C+ +WL   N+CPLCR+
Subjt:  VAVERLSKLKSEEEKGDCSVCLDEL--DCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRS

AT5G37200.1 RING/U-box superfamily protein1.2e-1041.27Show/hide
Query:  RGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIP-CGHVYHESCIFKWLSSSNSCPLCR
        R V  +R+     EEE   CS+C+++      ++IR+P C H++H+ C+F+WL   NSCPLCR
Subjt:  RGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIP-CGHVYHESCIFKWLSSSNSCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCGGCAATGGAGTATTGGAAGTTCAGTTAAGTTATCTGGAACGTGCAATTTCCGTTTCTTCATTCTCCCAACGAACCCTCTACGAAACTCAACCCACTCCATT
CAACAATGCACTCTTCTATCTCTCCGTGCACCAACTTCAACATCCCTTGTTCCACATTCGGCAATTTCTCTACTCACTCAACATTCGAAGGGAAACCATAGCCCGGCAAA
TCGCTTCCTACGTCGCCCACATGTGTAACGGGAACACGGGGTGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTCCGAGTGATCCGGATAGAAGAACAACCA
AGGGCGGAAGGATGGAGAGGAGTGGCGGTGGAGAGGTTGAGTAAGTTGAAATCGGAGGAGGAAAAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGAAAAGAG
GGAGGTCATAAGGATTCCTTGCGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTAGCAGCAGTAACTCTTGCCCTTTGTGTAGAAGCTCATTCCCACTACACA
ATGTCACAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCGGCAATGGAGTATTGGAAGTTCAGTTAAGTTATCTGGAACGTGCAATTTCCGTTTCTTCATTCTCCCAACGAACCCTCTACGAAACTCAACCCACTCCATT
CAACAATGCACTCTTCTATCTCTCCGTGCACCAACTTCAACATCCCTTGTTCCACATTCGGCAATTTCTCTACTCACTCAACATTCGAAGGGAAACCATAGCCCGGCAAA
TCGCTTCCTACGTCGCCCACATGTGTAACGGGAACACGGGGTGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTCCGAGTGATCCGGATAGAAGAACAACCA
AGGGCGGAAGGATGGAGAGGAGTGGCGGTGGAGAGGTTGAGTAAGTTGAAATCGGAGGAGGAAAAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGAAAAGAG
GGAGGTCATAAGGATTCCTTGCGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTAGCAGCAGTAACTCTTGCCCTTTGTGTAGAAGCTCATTCCCACTACACA
ATGTCACAAACTGA
Protein sequenceShow/hide protein sequence
MSFGNGVLEVQLSYLERAISVSSFSQRTLYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVRVIRIEEQP
RAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLSSSNSCPLCRSSFPLHNVTN