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CsGy4G002940 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G002940
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTransmembrane protein
Genome locationGy14Chr4:1882902..1885162
RNA-Seq ExpressionCsGy4G002940
SyntenyCsGy4G002940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044571.1 uncharacterized protein E6C27_scaffold46G003210 [Cucumis melo var. makuwa]9.01e-10090.11Show/hide
Query:  MELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKK
        MELISLAIRRLMEENR+RT SHRSSD D DAD  DMQLLS+LLSEVESTR EQRLNH SKQEDGEIIETNLEAE ENNVERSE+K+KTEEIVKELKEVKK
Subjt:  MELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKK

Query:  QNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        QNF+THCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSL TILKRKTTSAIQHQIEATELP LNIPA+PHV+LPDFDD 
Subjt:  QNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

KAE8649098.1 hypothetical protein Csa_015237 [Cucumis sativus]1.27e-115100Show/hide
Query:  MELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQ
        MELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQ
Subjt:  MELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQ

Query:  NFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        NFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
Subjt:  NFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

TYK17012.1 uncharacterized protein E5676_scaffold130G001570 [Cucumis melo var. makuwa]6.28e-9389.47Show/hide
Query:  MEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQNFITHCLVSA
        MEENR+RT SHRSSD D DAD  DMQLLS+LLSEVESTR EQRLNH SKQEDGEIIETNLEAE ENNVERSE+K+KTEEIVKELKEVKKQNF+THCLVSA
Subjt:  MEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQNFITHCLVSA

Query:  MIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        MIILTVAWQISEVSFILKLRDGLLSNPFKSL TILKRKTTSAIQHQIEATELP LNIPA+PHV+LPDFDD 
Subjt:  MIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

XP_004152113.1 uncharacterized protein LOC101214522 [Cucumis sativus]1.57e-120100Show/hide
Query:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVK
        MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVK
Subjt:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVK

Query:  ELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        ELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
Subjt:  ELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

XP_008454012.1 PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo]1.24e-10188.42Show/hide
Query:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIV
        M +AA  EMELISLAIRRLMEENR+RT SHRSSD D DAD  DMQLLS+LLSEVESTR EQRLNH SKQEDGEIIETNLEAE ENNVERSE+K+KTEEIV
Subjt:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIV

Query:  KELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        KELKEVKKQNF+THCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSL TILKRKTTSAIQHQIEATELP LNIPA+PHV+LPDFDD 
Subjt:  KELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

TrEMBL top hitse value%identityAlignment
A0A0A0KTW6 Uncharacterized protein7.61e-121100Show/hide
Query:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVK
        MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVK
Subjt:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVK

Query:  ELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        ELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
Subjt:  ELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

A0A1S3BXR6 uncharacterized protein LOC1034945626.01e-10288.42Show/hide
Query:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIV
        M +AA  EMELISLAIRRLMEENR+RT SHRSSD D DAD  DMQLLS+LLSEVESTR EQRLNH SKQEDGEIIETNLEAE ENNVERSE+K+KTEEIV
Subjt:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIV

Query:  KELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        KELKEVKKQNF+THCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSL TILKRKTTSAIQHQIEATELP LNIPA+PHV+LPDFDD 
Subjt:  KELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

A0A5A7TSP6 Uncharacterized protein4.36e-10090.11Show/hide
Query:  MELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKK
        MELISLAIRRLMEENR+RT SHRSSD D DAD  DMQLLS+LLSEVESTR EQRLNH SKQEDGEIIETNLEAE ENNVERSE+K+KTEEIVKELKEVKK
Subjt:  MELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKK

Query:  QNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        QNF+THCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSL TILKRKTTSAIQHQIEATELP LNIPA+PHV+LPDFDD 
Subjt:  QNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

A0A5D3CZN3 Uncharacterized protein3.04e-9389.47Show/hide
Query:  MEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQNFITHCLVSA
        MEENR+RT SHRSSD D DAD  DMQLLS+LLSEVESTR EQRLNH SKQEDGEIIETNLEAE ENNVERSE+K+KTEEIVKELKEVKKQNF+THCLVSA
Subjt:  MEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNH-SKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQNFITHCLVSA

Query:  MIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
        MIILTVAWQISEVSFILKLRDGLLSNPFKSL TILKRKTTSAIQHQIEATELP LNIPA+PHV+LPDFDD 
Subjt:  MIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS

A0A6J1IS75 uncharacterized protein LOC1114794851.25e-6367.2Show/hide
Query:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVK
        MAEAAA EMELISLAIRRLMEE  +RT SHRSS  +      D+Q LSRLLS+VESTR + R  HS+Q+D +II+ NL  +               EIVK
Subjt:  MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVK

Query:  ELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDF
        E+KEVK+QNFITHCLVSAM++LTVAWQ+SEVSFILKLRDGL SNPFKSLA ILKR TTSAIQH+IEATELP     ALPHV LPDF
Subjt:  ELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein2.6e-1337.84Show/hide
Query:  EMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVES--TRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEV
        ++E +S AI +L+ E R R     S DA  + DADD   LS L+S++ES   +G++ +   ++E+ E    +    +  +  + +++   EEI K++K+V
Subjt:  EMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVES--TRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEV

Query:  KKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATIL
        KKQN ITH L+SA IILT+ WQ+SE S I  L+D  +S+P +S+  +L
Subjt:  KKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGCGGCGGCGGTGGAGATGGAACTCATCAGCCTTGCGATTCGGAGGCTGATGGAGGAGAATCGCCACAGAACCAACTCTCATCGGAGCTCCGATGCCGATGC
CGATGCCGACGCCGACGATATGCAACTTCTTTCCCGATTACTCTCTGAGGTGGAATCAACAAGAGGAGAACAGAGGCTTAACCACTCGAAGCAAGAGGATGGGGAAATAA
TTGAAACAAACTTAGAGGCAGAAAGAGAAAATAATGTGGAAAGAAGTGAAATGAAATTGAAAACAGAGGAGATAGTGAAAGAGCTAAAAGAAGTGAAGAAGCAAAATTTC
ATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTGGCAAATCTCTGAAGTGTCTTTCATTTTGAAACTCAGAGATGGGTTGTTGAGCAATCCATTCAA
ATCCCTAGCAACAATTCTGAAAAGAAAGACAACTTCAGCAATACAACATCAGATTGAAGCTACTGAATTGCCTCATCTTAATATACCTGCCTTACCTCACGTGACCTTAC
CCGACTTCGATGATTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGGCGGCGGCGGTGGAGATGGAACTCATCAGCCTTGCGATTCGGAGGCTGATGGAGGAGAATCGCCACAGAACCAACTCTCATCGGAGCTCCGATGCCGATGC
CGATGCCGACGCCGACGATATGCAACTTCTTTCCCGATTACTCTCTGAGGTGGAATCAACAAGAGGAGAACAGAGGCTTAACCACTCGAAGCAAGAGGATGGGGAAATAA
TTGAAACAAACTTAGAGGCAGAAAGAGAAAATAATGTGGAAAGAAGTGAAATGAAATTGAAAACAGAGGAGATAGTGAAAGAGCTAAAAGAAGTGAAGAAGCAAAATTTC
ATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTGGCAAATCTCTGAAGTGTCTTTCATTTTGAAACTCAGAGATGGGTTGTTGAGCAATCCATTCAA
ATCCCTAGCAACAATTCTGAAAAGAAAGACAACTTCAGCAATACAACATCAGATTGAAGCTACTGAATTGCCTCATCTTAATATACCTGCCTTACCTCACGTGACCTTAC
CCGACTTCGATGATTCATAG
Protein sequenceShow/hide protein sequence
MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQNF
ITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS