; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G003040 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G003040
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description30S ribosomal protein S1-like
Genome locationGy14Chr4:1927358..1933729
RNA-Seq ExpressionCsGy4G003040
SyntenyCsGy4G003040
Gene Ontology termsGO:0000481 - maturation of 5S rRNA (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0034337 - RNA folding (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR003029 - S1 domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044578.1 30S ribosomal protein S1 isoform X1 [Cucumis melo var. makuwa]1.44e-16392.42Show/hide
Query:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
        MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSSS ILPLKSPSKR SIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
Subjt:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKV-IQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAF
        IEGSNAGGLLVRFYSL+GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKV IQADE+N+KLIFSEKEA  SKFSGQV VGDVYE KVGS+EDYGAF
Subjt:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKV-IQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAF

Query:  VHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNK--NKSRITLSIRQLEEDPLLETLDKVIPQ
        VHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV++  +KSRITLSIRQLEEDPLLETLDKVIPQ
Subjt:  VHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNK--NKSRITLSIRQLEEDPLLETLDKVIPQ

XP_004152109.1 uncharacterized protein LOC101213559 isoform X2 [Cucumis sativus]9.66e-18099.64Show/hide
Query:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
        MPIFVATIASVSAHSFLSLLASTSDASST SSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
Subjt:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV
        IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV
Subjt:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV

Query:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
        HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
Subjt:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ

XP_008454000.1 PREDICTED: 30S ribosomal protein S1 isoform X1 [Cucumis melo]9.59e-16793.43Show/hide
Query:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
        MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSSS ILPLKSPSKR SIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
Subjt:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV
        IEGSNAGGLLVRFYSL+GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV VGDVYE KVGS+EDYGAFV
Subjt:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV

Query:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
        HLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV+++KSRITLSIRQLEEDPLLETLDKVIPQ
Subjt:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ

XP_011653045.1 uncharacterized protein LOC101213559 isoform X1 [Cucumis sativus]1.11e-17999.64Show/hide
Query:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
        MPIFVATIASVSAHSFLSLLASTSDASST SSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
Subjt:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV
        IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV
Subjt:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV

Query:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
        HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
Subjt:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ

XP_038897871.1 30S ribosomal protein S1 homolog B [Benincasa hispida]7.55e-15887.36Show/hide
Query:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSP---ESVRRARRSADWKAAREYLDSGFIY
        MPIF AT+ SV AHSFLSLLAST+D +     SS+SFILP KSPSKR S FP+RVSLSGKPDPIAGVLDTSP   ES+RRARRSADWKAAREYLD+GFIY
Subjt:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSP---ESVRRARRSADWKAAREYLDSGFIY

Query:  EGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYG
        EGRIEGSNAGGLLVRFYSL+GFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADE+N+KLIFSEKEAA SKFS QV VGDVYE +VGSVEDYG
Subjt:  EGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYG

Query:  AFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
        AFVHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV+++KSRITLSI+QLEEDPLLETLDKVIPQ
Subjt:  AFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ

TrEMBL top hitse value%identityAlignment
A0A0A0KTX2 Uncharacterized protein4.68e-18099.64Show/hide
Query:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
        MPIFVATIASVSAHSFLSLLASTSDASST SSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
Subjt:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV
        IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV
Subjt:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV

Query:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
        HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
Subjt:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ

A0A1S3BXL4 30S ribosomal protein S1 isoform X14.64e-16793.43Show/hide
Query:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
        MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSSS ILPLKSPSKR SIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
Subjt:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV
        IEGSNAGGLLVRFYSL+GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV VGDVYE KVGS+EDYGAFV
Subjt:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFV

Query:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
        HLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV+++KSRITLSIRQLEEDPLLETLDKVIPQ
Subjt:  HLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ

A0A5A7TNY0 30S ribosomal protein S1 isoform X16.99e-16492.42Show/hide
Query:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
        MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSSS ILPLKSPSKR SIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR
Subjt:  MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKV-IQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAF
        IEGSNAGGLLVRFYSL+GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKV IQADE+N+KLIFSEKEA  SKFSGQV VGDVYE KVGS+EDYGAF
Subjt:  IEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKV-IQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAF

Query:  VHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNK--NKSRITLSIRQLEEDPLLETLDKVIPQ
        VHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV++  +KSRITLSIRQLEEDPLLETLDKVIPQ
Subjt:  VHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNK--NKSRITLSIRQLEEDPLLETLDKVIPQ

A0A6J1GVD7 LOW QUALITY PROTEIN: uncharacterized protein LOC1114575275.17e-14382.01Show/hide
Query:  MPIFVAT-IASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSP---ESVRRARRSADWKAAREYLDSGFI
        MPIF AT + S+SAHSFLSL AS +DAS   +S S+SF+L  KSPSKR S F +RVSLSGKP+PIAGVL++SP   ESVRRARRSADWK AREYLDSGFI
Subjt:  MPIFVAT-IASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSP---ESVRRARRSADWKAAREYLDSGFI

Query:  YEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDY
        ++GRIEGSNAGGLLVRFYSLVGFLPFP LSP+HSCKEPYKSIQDIAKSLIGSLI VKVIQADEKN+ LIFSEKEAA SKFS +V VGDVYE +VGS+EDY
Subjt:  YEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDY

Query:  GAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
        GAFVHLR SDGLYHLTGLVH+SEVSWDLVQDVRDILSEGDEV VKVI+V+++KSRITLSI+QLEEDPLLETLDKVIPQ
Subjt:  GAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ

A0A6J1IUF3 uncharacterized protein LOC1114794061.14e-14583.09Show/hide
Query:  MPIFVAT-IASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSP---ESVRRARRSADWKAAREYLDSGFI
        MPIF AT + S+SAHSFLSLLAST DAS    S SSSF+L  KSPSKR S F +RVSLSGKP+PIAGVL++SP   ESVRRARRSADWK AREYLDSGFI
Subjt:  MPIFVAT-IASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSP---ESVRRARRSADWKAAREYLDSGFI

Query:  YEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDY
        ++GRIEGSNAGGLLVRFYSLVGFLPFP LSP+HSCKEPYKSIQDIAKSLIGSLI VKVIQADEKN+ LIFSEKEAA SKFS QV VGDVYE +VGSVEDY
Subjt:  YEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDY

Query:  GAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ
        GAFVHLR SDG YHLTGLVH+SEVSWDLVQDVRDILSEGDEV VKV++V+++KSRITLSI+QLEEDPLLETLDKVIPQ
Subjt:  GAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ

SwissProt top hitse value%identityAlignment
P29344 30S ribosomal protein S1, chloroplastic3.3e-2029.47Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR
        S+R+ +    W+  R+      + +G+I G+N GG++     L GF+PF Q+S   S +E           L+   I +K ++ DE+  +L+ S ++A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR

Query:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP
             Q+ +G V  G V S++ YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ ++ + R++LS ++LE  P
Subjt:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP

P46228 30S ribosomal protein S12.4e-1828.95Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR
        S+RR      W+  R+           +  +N GG LVR   L GF+P   +S +   KE           L+G  + +K ++ DE   +L+ S + A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR

Query:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP
         +   ++ VG+V  G V  ++ YGAF+ +        ++GL+H+SE+S D ++    + +  DEV V +I+++  + RI+LS +QLE +P
Subjt:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP

P74142 30S ribosomal protein S1 homolog B2.8e-1929.35Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR
        S R+ +    W+   E  +SG   E  + G+N GG++     L GF+P   L             +D   +L+G ++   +++A++ N KL+ +++   +
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR

Query:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP--LLETLDKV
        ++  G++A G++YEGKV  ++ YG FV +        +TGL+HVS+VS   V  +  + + G  ++V V  +++ K+RI+LS R LE  P  L+E  D++
Subjt:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP--LLETLDKV

Query:  I
        +
Subjt:  I

Q93VC7 30S ribosomal protein S1, chloroplastic2.1e-1929.47Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR
        S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E           L+   I +K ++ DE+  KL+ S ++A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR

Query:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP
             Q+ +G V  G V S++ YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ ++++ R++LS ++LE  P
Subjt:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP

Q9JZ44 30S ribosomal protein S16.9e-1831.98Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEA--
        S  +A+R+ADW A  E +++G I  G I G   GGL V   S+  FLP   +          + ++D      G  I  KVI+ D+K   ++ S +    
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEA--

Query:  -----ARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP
              R      +  G V +G V ++ DYGAFV L   DGL H+T      +++W  V+   ++L  G EV  KV+  ++ K R++L ++QL EDP
Subjt:  -----ARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP

Arabidopsis top hitse value%identityAlignment
AT1G12800.1 Nucleic acid-binding, OB-fold-like protein8.4e-1132.62Show/hide
Query:  QDIAKSLIGSLISVKVIQADEKNRKLIFS------EKEAARSK-FSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDI
        Q    S +G  I V V+ A+  +RKLIFS      E+E  + +    ++ VGDV +  +  +  +G F  L        +  LVH SEVSWD   D    
Subjt:  QDIAKSLIGSLISVKVIQADEKNRKLIFS------EKEAARSK-FSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDI

Query:  LSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVI
           G  V  KV  ++    RI LS++++  DPL E L+ V+
Subjt:  LSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVI

AT3G23700.1 Nucleic acid-binding proteins superfamily8.2e-7558.94Show/hide
Query:  SFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAG-----VLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGL
        +FLS       +SS+SSS+ +S +  +KS S  ++    R S       +       + DTS E+   A   +DWK A+ Y  SG  +EG ++G N GGL
Subjt:  SFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAG-----VLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGL

Query:  LVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLY
        L+RF+SLVGFLP+PQLSPS SCKEP KSI +IAK+L+GS + VKV+QADE+NRKLI SEK A   K+S  V VGDV+ G+VGSVEDYGAF+HLR  DGLY
Subjt:  LVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLY

Query:  HLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVI
        HLTGLVHVSEVSWD VQDVRD+L +GDEV V V N++K KSRITLSI+QLE+DPLLETLDKVI
Subjt:  HLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVI

AT4G29060.1 elongation factor Ts family protein7.3e-0731.96Show/hide
Query:  SEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP
        SE  A +++   ++  G  + GKV +++ +GAFV     D      GLVHVS++S + V+DV  +++ G EV V+++  +    RI+L++R+ ++ P
Subjt:  SEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP

AT4G29060.2 elongation factor Ts family protein7.3e-0731.96Show/hide
Query:  SEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP
        SE  A +++   ++  G  + GKV +++ +GAFV     D      GLVHVS++S + V+DV  +++ G EV V+++  +    RI+L++R+ ++ P
Subjt:  SEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP

AT5G30510.1 ribosomal protein S11.5e-2029.47Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR
        S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E           L+   I +K ++ DE+  KL+ S ++A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAAR

Query:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP
             Q+ +G V  G V S++ YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ ++++ R++LS ++LE  P
Subjt:  SKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATCTTTGTTGCAACCATCGCCTCTGTCTCTGCTCATTCCTTTCTCTCACTCCTTGCTTCCACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCTCCTT
CATTTTACCACTCAAATCCCCCTCTAAACGCTCTTCCATTTTCCCCTCCAGAGTCTCCCTCTCCGGAAAACCTGACCCCATTGCCGGAGTTCTAGACACCTCCCCGGAAT
CCGTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTATGAGGGTAGGATTGAAGGTTCAAATGCTGGAGGTTTACTT
GTACGATTTTATTCTCTTGTTGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGAACCATACAAGAGTATTCAAGATATTGCAAAAAGCTTAATTGG
TTCGCTTATATCAGTAAAGGTAATCCAAGCAGATGAGAAAAACAGGAAATTGATATTTTCAGAGAAGGAAGCTGCGCGGTCAAAGTTTTCTGGGCAAGTGGCTGTGGGGG
ATGTTTATGAAGGCAAAGTTGGATCTGTGGAGGATTATGGTGCTTTTGTACATCTACGTCTCTCTGATGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTT
TCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAGGTCATTAATGTTAACAAGAATAAGTCTCGGATCACATTGTCGATCAG
ACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGTTTGTAAAACATTATTGTATGCATTTAGTCAACCTTTTCAACTACTCTCATCTCCTA
ACTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAAGAGAGACGTGTATGTTTATGCGTCACGCAAATAAGCGATGTGTTCCCATTCGGATTTGCAGCAGTTGGTGGCTTTCCATATCCGAATCCTTTCCCATTGCGCTC
CTCCCCGCCATTTTCTTCCCTTCTCTCCACTCCCACAATCATGCCAATCTTTGTTGCAACCATCGCCTCTGTCTCTGCTCATTCCTTTCTCTCACTCCTTGCTTCCACTT
CTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCTCCTTCATTTTACCACTCAAATCCCCCTCTAAACGCTCTTCCATTTTCCCCTCCAGAGTCTCCCTCTCCGGAAAA
CCTGACCCCATTGCCGGAGTTCTAGACACCTCCCCGGAATCCGTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTA
TGAGGGTAGGATTGAAGGTTCAAATGCTGGAGGTTTACTTGTACGATTTTATTCTCTTGTTGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGAAC
CATACAAGAGTATTCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATATCAGTAAAGGTAATCCAAGCAGATGAGAAAAACAGGAAATTGATATTTTCAGAGAAGGAA
GCTGCGCGGTCAAAGTTTTCTGGGCAAGTGGCTGTGGGGGATGTTTATGAAGGCAAAGTTGGATCTGTGGAGGATTATGGTGCTTTTGTACATCTACGTCTCTCTGATGG
TCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAGGTCATTA
ATGTTAACAAGAATAAGTCTCGGATCACATTGTCGATCAGACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGTTTGTAAAACATTATTG
TATGCATTTAGTCAACCTTTTCAACTACTCTCATCTCCTAACTGAGCTTTAGCTATATGATGAACATCATAATTAACAGGACAGTTCTGCTGAACCTGATTCTTTTGGAC
CTAAAGGCGACAGCGAAATAATACCCCTCCCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGAGGGGTATGTTACTATTTTTAGTTTGACATATTGAGGGTCA
TTTCTGAAAAGCTTTGAAAGTATCACGTGCAGTCTTTAAAGATTACTGATAACAACAATGTATCAGCATCAACAGTACGCATAAATATGCTGTGGCTTGTTCTGAGTACT
TGAGGTTTAACTTTTATGCTCTTTGTTATGTCTAAATCAAAAGCTAAGATTCTAGTGATATTTGGGCATGTGCAATTTTATGGACATACCAAATTTCCTTAAGCATGGAC
GAAGTAATTTCACACATACAAAACGAGGAGATATGACAACCAACTAAAAAGAGCTTTTTAACTTTCTCGCTTACTTTCTCTCCATCGATTACACTTTTTGGGGTTTTAGT
CATCGGTGGAGATCATATTATGTGTTTGTGGCATCTCAAGATATCTTGACCCTGAGTCACAATATGATCTTAATTTGGCTAGTTTGAATATCAGTATAGTAGATGTTCGT
GTCAATCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCAAATGCACCTCCCGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAG
GCAGGTTCAAGAAATTCAGCTGACAACATCACTCGATCAGGAAGGTATAAAAAGGGCATTGCAGCGTGTGTTGGAACGTGTCCCGTGATTTTGGAAACAAAGTTCGTTTT
GTTCGATTTTGTATGAAGCTGTGTGTAAAGATGATGATGCCAATTCAATTGTTTCCAGTAAGTTGTATATTTTGTCTGATCTCTACATCTATTCTAATGGTAAAAGTAAA
AGGTGTTGTAAGCATGAAGGCTCTATCCTTGTATGTACATATTCTTTGTTTCATTGAATTCAAAGAAAATTTCAACTAACCTTTGTTTCTTATATTCTTTACTTTCTATA
TCTTATTGTTCTC
Protein sequenceShow/hide protein sequence
MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSSFILPLKSPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLL
VRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEV
SWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQVCKTLLYAFSQPFQLLSSPN