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CsGy4G004500 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G004500
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein UPSTREAM OF FLC
Genome locationGy14Chr4:2982605..2983636
RNA-Seq ExpressionCsGy4G004500
SyntenyCsGy4G004500
Gene Ontology termsGO:0051258 - protein polymerization (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain
IPR010369 - Protein SOSEKI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637152.1 hypothetical protein CSA_004634 [Cucumis sativus]2.00e-3772.28Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K                      DVLDRLAVLRGNAMPFLYSWSC
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC

Query:  K
        K
Subjt:  K

XP_011653119.2 protein UPSTREAM OF FLC isoform X2 [Cucumis sativus]1.37e-3671.7Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K                      DVLDRLAVLRGNAMPFLYSWSC
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC

Query:  KR-YKN
        KR YK+
Subjt:  KR-YKN

XP_031739670.1 protein UPSTREAM OF FLC isoform X1 [Cucumis sativus]5.57e-4672.73Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K                      DVLDRLAVLRGNAMPFLYSWSC
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC

Query:  KRYKNEKEKGGKIKQGENEGC
        KRYKNEKEKGGKIK G +  C
Subjt:  KRYKNEKEKGGKIKQGENEGC

XP_031745649.1 uncharacterized protein LOC116406091 isoform X1 [Cucumis sativus]9.94e-4872.73Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K                      DVLDRLAVLRGNAMPFLYSWSC
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC

Query:  KRYKNEKEKGGKIKQGENEGC
        KRYKNEKEKGGKIK G +  C
Subjt:  KRYKNEKEKGGKIKQGENEGC

XP_031745651.1 protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus]2.82e-3871.7Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K                      DVLDRLAVLRGNAMPFLYSWSC
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC

Query:  KR-YKN
        KR YK+
Subjt:  KR-YKN

TrEMBL top hitse value%identityAlignment
A0A0A0KXS9 Uncharacterized protein6.64e-3771.7Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K                      DVLDRLAVLRGNAMPFLYSWSC
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSC

Query:  KR-YKN
        KR YK+
Subjt:  KR-YKN

A0A5A7SXF0 Protein UPSTREAM OF FLC1.65e-1585.71Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP
        MEEKDRDH  RHH  RDSPTPMKKA   YYISRNGRLEQPHFLEIPLFP
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP

A0A5D3DGY6 Egg cell-secreted protein 1.2-like4.22e-2560.76Show/hide
Query:  ARQYKLDGMAFSCLNSLLKIRTCIKDVRVIFRNGGKWKVSLNCCNAIKSIERECLPDLLNLMGFSPKEVRIIDDHCNIG
        A + KLDG AF CL SL ++  CI D+R IFRN  KWK+SLNCC+AIK+IE EC P+ LNLMGF+ KE+ IID++C I 
Subjt:  ARQYKLDGMAFSCLNSLLKIRTCIKDVRVIFRNGGKWKVSLNCCNAIKSIERECLPDLLNLMGFSPKEVRIIDDHCNIG

A0A6J1FUF7 protein UPSTREAM OF FLC isoform X21.28e-1654.12Show/hide
Query:  SPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR
        +P PMKK QVFYY+SRNGRLEQPHFLEI LFP      K                      DV+DRL +LRG AM  LYSWSCKR
Subjt:  SPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR

A0A6J1IY41 protein UPSTREAM OF FLC isoform X22.88e-1453.09Show/hide
Query:  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR
        MKK QVFYY+SRNGRLEQPHF+EI LFP      K                      DV+DRL VLRG AM  LY+WSCKR
Subjt:  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR

SwissProt top hitse value%identityAlignment
Q8GY65 Protein SOSEKI 42.3e-0843.18Show/hide
Query:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN
        P+  +   V YY+SRNGRL+ PHF+E+PL                  H  L L       DV++RL  LRGN M  LYSWS KR YKN
Subjt:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN

Q8GYT8 Protein SOSEKI 31.3e-0637.65Show/hide
Query:  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN
        +KK Q+ YY+S+N +LE PHF+E+        +S     Y                 DV++RL VLRG  M  +YSWS KR Y+N
Subjt:  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN

Q9FJF5 Protein SOSEKI 51.6e-0639.56Show/hide
Query:  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN
        R  P   +K  V YY+ RNG+L+ PHF+E+ L                  H  L L       DV++RL  LRG  M  LYSWS KR YKN
Subjt:  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN

Q9LX14 Protein SOSEKI 27.4e-0736.54Show/hide
Query:  HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR
        +HH+H    +     KK      QV YY++RNG LE PHF+E+        +S V        +  L L       DV++RL +LRG  M   Y+WSCKR
Subjt:  HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR

Query:  -YKN
         Y+N
Subjt:  -YKN

Q9SRD8 Egg cell-secreted protein 1.14.8e-0630.14Show/hide
Query:  KLDGMAFSCLNSLLKIRTCIKDVRVIFRNGGKWKVSLNCCNAIKSIERECLPDLLNLMGFSPKEVRIIDDHCN
        KLD     C +SL++++ C  ++ + F NG  + +   CC+AI++I R+C P ++ ++GF+ +E  ++  +C+
Subjt:  KLDGMAFSCLNSLLKIRTCIKDVRVIFRNGGKWKVSLNCCNAIKSIERECLPDLLNLMGFSPKEVRIIDDHCN

Arabidopsis top hitse value%identityAlignment
AT2G28150.1 Domain of unknown function (DUF966)8.9e-0837.65Show/hide
Query:  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN
        +KK Q+ YY+S+N +LE PHF+E+        +S     Y                 DV++RL VLRG  M  +YSWS KR Y+N
Subjt:  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN

AT3G46110.1 Domain of unknown function (DUF966)1.6e-0943.18Show/hide
Query:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN
        P+  +   V YY+SRNGRL+ PHF+E+PL                  H  L L       DV++RL  LRGN M  LYSWS KR YKN
Subjt:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN

AT3G46110.2 Domain of unknown function (DUF966)1.6e-0943.18Show/hide
Query:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN
        P+  +   V YY+SRNGRL+ PHF+E+PL                  H  L L       DV++RL  LRGN M  LYSWS KR YKN
Subjt:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN

AT5G10150.1 Domain of unknown function (DUF966)5.2e-0836.54Show/hide
Query:  HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR
        +HH+H    +     KK      QV YY++RNG LE PHF+E+        +S V        +  L L       DV++RL +LRG  M   Y+WSCKR
Subjt:  HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR

Query:  -YKN
         Y+N
Subjt:  -YKN

AT5G59790.1 Domain of unknown function (DUF966)1.2e-0739.56Show/hide
Query:  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN
        R  P   +K  V YY+ RNG+L+ PHF+E+ L                  H  L L       DV++RL  LRG  M  LYSWS KR YKN
Subjt:  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCT
GGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTAT
TCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGTATAAAAATGAAAAAGAGAAAGGA
GGAAAAATAAAACAGGGAGAAAACGAAGGGTGTGAAGCTATTGCTTCTTCATCCCATGATCTAGAAGCGAGGCAATATAAGTTGGATGGCATTGCTTCCTCGTCCCATGA
TCTAGAAGCGAGGCAATATAAGTTGGATGGCATGGCATTCTCATGTTTGAATTCCTTGCTTAAAATTCGTACGTGCATCAAGGATGTTCGAGTAATATTTCGAAATGGCG
GTAAATGGAAAGTAAGTCTCAACTGTTGCAATGCAATTAAGAGTATAGAGCGTGAGTGTTTGCCAGATTTGTTGAATCTCATGGGCTTCTCACCAAAGGAGGTCAGGATT
ATTGATGACCATTGCAATATTGGGACCAAGATCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCT
GGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTAT
TCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGTATAAAAATGAAAAAGAGAAAGGA
GGAAAAATAAAACAGGGAGAAAACGAAGGGTGTGAAGCTATTGCTTCTTCATCCCATGATCTAGAAGCGAGGCAATATAAGTTGGATGGCATTGCTTCCTCGTCCCATGA
TCTAGAAGCGAGGCAATATAAGTTGGATGGCATGGCATTCTCATGTTTGAATTCCTTGCTTAAAATTCGTACGTGCATCAAGGATGTTCGAGTAATATTTCGAAATGGCG
GTAAATGGAAAGTAAGTCTCAACTGTTGCAATGCAATTAAGAGTATAGAGCGTGAGTGTTTGCCAGATTTGTTGAATCTCATGGGCTTCTCACCAAAGGAGGTCAGGATT
ATTGATGACCATTGCAATATTGGGACCAAGATCCACTAA
Protein sequenceShow/hide protein sequence
MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKRYKNEKEKG
GKIKQGENEGCEAIASSSHDLEARQYKLDGIASSSHDLEARQYKLDGMAFSCLNSLLKIRTCIKDVRVIFRNGGKWKVSLNCCNAIKSIERECLPDLLNLMGFSPKEVRI
IDDHCNIGTKIH