| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6600626.1 DNA-directed RNA polymerases II, IV and V subunit 8B, partial [Cucurbita argyrosperma subsp. sororia] | 2.34e-92 | 90.41 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA LLF+DIFKVKCVNPDGKKYDKVSRIEARSEKLSM+MLLDVNTEIYPIDEG+K+LMVLSPTLNYDG+PVT Y Q+GKKSLADKFEYIMHGK YKL+D
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
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| XP_004149143.1 DNA-directed RNA polymerases II, IV and V subunit 8B isoform X1 [Cucumis sativus] | 1.65e-101 | 100 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
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| XP_008453774.1 PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Cucumis melo] | 1.86e-98 | 97.26 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFND+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPI+CAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
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| XP_022929200.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 8.20e-95 | 94.48 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA LLFND+FKVKCVNPDGKKYDKVSRIEARSEKLSM+MLLDVNTEIYPIDEGEK+LMVLSPTLNYDG+PVTSY QEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
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| XP_022983196.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita maxima] | 4.04e-93 | 91.1 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA +LF+DIFKVKCVNPDGKKYDKVSRIEARSEKLSM+MLLDVNTEIYPIDEG+K+LMVLSPTLNYDG+PVTSY QEGKKSLADKFEYIMHGK YKL+D
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KZC2 Uncharacterized protein | 7.99e-102 | 100 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
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| A0A1S3BY97 DNA-directed RNA polymerases II and V subunit 8A-like | 8.98e-99 | 97.26 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFND+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPI+CAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
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| A0A5A7TNG5 DNA-directed RNA polymerases II and V subunit 8A-like | 8.98e-99 | 97.26 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFND+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPI+CAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKLT
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| A0A6J1ETP8 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 3.97e-95 | 94.48 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA LLFND+FKVKCVNPDGKKYDKVSRIEARSEKLSM+MLLDVNTEIYPIDEGEK+LMVLSPTLNYDG+PVTSY QEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
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| A0A6J1J454 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 3.97e-95 | 94.48 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA LLFND+FKVKCVNPDGKKYDKVSRIEARSEKLSM+MLLDVNTEIYPIDEGEK+LMVLSPTLNYDG+PVTSY QEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XT81 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 1.6e-31 | 43.45 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAG++F+D+F VK V+PDGKK+D+VSR +E M +++D+N++IYP+ + +K +VL+ TL DG D + + ++EY+M+GK Y+L D
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSD-LKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRK
+ SG+D ++ YASFGGL M LKG+ I+ F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRK
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| O81097 DNA-directed RNA polymerases II and V subunit 8A | 3.4e-42 | 58.45 | Show/hide |
Query: LLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGS
+LF DIF V ++PDGKK+DKV+R++A S L M M LDVNTE+YP+ G+K + L+PTLN DG+P T Y KK+LADK+EYIMHGK YK+S E
Subjt: LLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGS
Query: GSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
G K E+Y SFGGL MLLKGDP H + F +DQ +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
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| P52434 DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 1.3e-30 | 42.57 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGS-PVTSYKDQEGKKSLADKFEYIMHGKTYKLS
MAG+LF DIF VK ++P+GKK+D+VSR+ SE M ++LDVN +IYP+D G+K +V++ TL DG+ Y + + S AD+FEY+M+GK Y++
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGS-PVTSYKDQEGKKSLADKFEYIMHGKTYKLS
Query: DEGSGSD--LKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
+ + ++ ++ Y S+GGL M L+GD + F VD ++LL++KL
Subjt: DEGSGSD--LKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
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| Q19826 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 2.4e-32 | 44.14 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAG++F+D+FKVK V+PDGKK+D+VSR +E M +++D+N++IYP+ + +K+ +VL+ TL DG D + + ++EY+M+GK Y+L D
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSD-LKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRK
+ +G+D K+ YASFGGL M LKG+ I+ F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRK
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| Q9M1A8 DNA-directed RNA polymerases II, IV and V subunit 8B | 2.6e-42 | 57.75 | Show/hide |
Query: LLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGS
++F DIF V ++PDGKK+DKV+R+EARS L M M LDVNTE+YP+ G+K + ++PTLN DG+P T Y KK+LADK+EYIMHGK YK+S E
Subjt: LLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGS
Query: GSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
G K E+Y SFGGL MLL+GDP H + F +DQ +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL
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