CuGenDBv2

Gene ID	CsGy4G004960
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	sigma intracellular receptor 2-like
Genome location	Gy14Chr4:3507751..3508434
RNA-Seq Expression	CsGy4G004960
Synteny	CsGy4G004960
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR016964 - Sigma intracellular receptor 2 IPR033118 - EXPERA domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577250.1 Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]

5.00e-84

77.84

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG +LKLFDSVLFV F VHA+APPLISAQLLLP  LFP++ I  K  YI  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        GVSLFSAMAAIAAELIGSQRASG+LL +Y PFL +GVLA LRGL+PRC+KAT TG   GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

XP_004149168.1 sigma intracellular receptor 2 [Cucumis sativus]

2.72e-113

100

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

XP_008453730.1 PREDICTED: transmembrane protein 97-like [Cucumis melo]

7.10e-100

88.69

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQTLFP+I IH KN+YITHSGDYLMA+ PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIY PFL +GV AMLRGLLP C KATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

XP_022929300.1 sigma intracellular receptor 2-like [Cucurbita moschata]

7.10e-84

76.65

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG +LKLFDSVLFVF  VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        GVSLFSAM AIAAELIGSQRASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

XP_038876784.1 sigma intracellular receptor 2-like [Benincasa hispida]

5.13e-93

82.14

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA+LKLFDS+LFV FLVHALAPPLI AQLLLPQTLFP++ IH KN YIT SGDYLMA+ PPFF+GLLWLELLLQWPLTLLNLYAI  +K WLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAEL+GSQ+ASGILL +Y PFL +GV A LRGL+PRC+KAT  GHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZE5 EXPERA domain-containing protein

1.32e-113

100

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

A0A1S3BWY8 transmembrane protein 97-like

3.44e-100

88.69

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQTLFP+I IH KN+YITHSGDYLMA+ PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIY PFL +GV AMLRGLLP C KATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

A0A5D3CY30 Transmembrane protein 97-like

3.44e-100

88.69

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQTLFP+I IH KN+YITHSGDYLMA+ PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIY PFL +GV AMLRGLLP C KATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

A0A6J1EU13 sigma intracellular receptor 2-like

3.44e-84

76.65

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG +LKLFDSVLFVF  VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        GVSLFSAM AIAAELIGSQRASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

A0A6J1JCI5 sigma intracellular receptor 2-like

1.63e-82

75.45

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG +LKLFDSVLFV   VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        GVSLF+AM AIAAELIGSQRASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

SwissProt top hits

e value

%identity

Alignment

Q6DFQ5 Sigma intracellular receptor 2

3.5e-06

25.97

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYA-IPTSKSWLHTTCLI
        M    +L + + F +F  H     L+  Q +LP +L+P   + L   Y     D+LMA+ PP+F   ++ E +LQ P   +  YA       W+    ++
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYA-IPTSKSWLHTTCLI

Query:  YGVSLFSAMAAIAAELIG------------SQRASGILLTIYFPFLAVGVLAML
        Y   + + + AI   ++             +Q+    L++IY P+L V VL +L
Subjt:  YGVSLFSAMAAIAAELIG------------SQRASGILLTIYFPFLAVGVLAML

Arabidopsis top hits

e value

%identity

Alignment

AT1G05210.1 Transmembrane protein 97, predicted

9.6e-36

48.5

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA+ KL D  LFV+F+  A+  PLI  Q  LP  ++P     LK+KYI   GDYL+ + P F VGL+W ELL  WPL++ N+YAI   KSW  TTCL+Y
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        G SL ++MAAI  ++IGS +AS  LL +Y PF+  G+LA+LRGL+ R  K  T   G   +I  ++K
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

AT1G05220.1 Transmembrane protein 97, predicted

3.0e-29

44.44

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA+ KL +  LF FF + A+  PL++ Q+L P  ++P +   LK+ Y +   DYL  + P FFVGL+W E++   PL+++N+YAI TSKSW  TT L+Y
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATT
        G S  ++MAAI  ++IGS++ +  LL  Y PF+ + +LAMLRGL+    K +T
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATT

AT1G05220.2 Transmembrane protein 97, predicted

3.0e-29

44.44

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA+ KL +  LF FF + A+  PL++ Q+L P  ++P +   LK+ Y +   DYL  + P FFVGL+W E++   PL+++N+YAI TSKSW  TT L+Y
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATT
        G S  ++MAAI  ++IGS++ +  LL  Y PF+ + +LAMLRGL+    K +T
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATT

AT2G32380.1 Transmembrane protein 97, predicted

3.3e-36

48.5

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA  KL D+VLF++F + A+  PLI  Q  LP  +FP   + L   YI   GDYL+ + P F VGL+W ELLL WPL+++N+YAI   KSW  TT ++Y
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        G S+ ++MAAI  E+IGS +AS  LL +Y PF+ VG+LA+LRGLL + NK +    G  P+I  ++K
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGGCTGTTCTCAAGCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAAACCCTTTT
CCCCAATATTTTCATTCATTTAAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTC
TTCAATGGCCACTCACGCTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCT
ATAGCTGCTGAATTGATTGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGGTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCG
TTGCAACAAGGCTACAACCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

mRNA sequence

Show/hide mRNA sequence

ATCTGAGAATCAATCTCACACGGTTCAAAAACAAAAAGAAGACAATCTCCGTAGTCTCTTCCGGCAAGAGAAGAAGTTGTGGAAAGTGAAACGATGGGGGCTGTTCTCAA
GCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAAACCCTTTTCCCCAATATTTTCATTC
ATTTAAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTCTTCAATGGCCACTCACG
CTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCTGCTGAATTGAT
TGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGGTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCGTTGCAACAAGGCTACAA
CCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

Protein sequence

Show/hide protein sequence

MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAA
IAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

CsGy4G004960 (gene) of Cucumber (Gy14) v2.1 genome