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CsGy4G005600 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G005600
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein SPIRAL1-like 5
Genome locationGy14Chr4:4004838..4005753
RNA-Seq ExpressionCsGy4G005600
SyntenyCsGy4G005600
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146520.1 protein SPIRAL1-like 5 [Cucumis sativus]5.52e-71100Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  ITKQ
        ITKQ
Subjt:  ITKQ

XP_008452039.1 PREDICTED: protein SPIRAL1-like 5 [Cucumis melo]2.68e-6497.03Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD-HNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD H+NNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD-HNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  D
        D
Subjt:  D

XP_022136791.1 protein SPIRAL1-like 5 [Momordica charantia]1.11e-5889Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DDQP KPQVS+V+LPPPYGID++PDD +NNPSPSPKQLVSNN YPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

XP_022941576.1 protein SPIRAL1-like 5 [Cucurbita moschata]4.38e-5891Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD NN PSPSPKQ  SNN YPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

XP_038883008.1 protein SPIRAL1-like 5 [Benincasa hispida]1.76e-6297.03Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNN-PSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD+NNN PSPSPKQLVSNN YPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNN-PSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  D
        D
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A0A0KUV0 Uncharacterized protein2.67e-71100Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  ITKQ
        ITKQ
Subjt:  ITKQ

A0A1S3BTQ0 protein SPIRAL1-like 51.30e-6497.03Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD-HNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD H+NNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD-HNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  D
        D
Subjt:  D

A0A5D3CZ49 Protein SPIRAL1-like 51.30e-6497.03Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD-HNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD H+NNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD-HNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  D
        D
Subjt:  D

A0A6J1C4I1 protein SPIRAL1-like 55.37e-5989Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DDQP KPQVS+V+LPPPYGID++PDD +NNPSPSPKQLVSNN YPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

A0A6J1J7K0 protein SPIRAL1-like 52.12e-5891Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD NN PSPSPKQ  SNN YPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.1e-1747.41Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLV-----------------SNNNYPRAHGQNSGNFITDRPSTK
        M RG S GGG+SSLGYLFG  + P KP ++    P    + ++ D       PSPK +                  S NNY RA GQN+GNF+TDRPSTK
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLV-----------------SNNNYPRAHGQNSGNFITDRPSTK

Query:  VKSAPGGDSSLGYLFG
        V +APGG SSL YLFG
Subjt:  VKSAPGGDSSLGYLFG

Q2QQ99 Protein SPIRAL1-like 37.4e-1550Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        M RG S GGG+SSLGYLFG  + P+  +    V  P       P          P  + S+  NNY RA GQN GNF+TDRPSTKV++APGG SSL YLF
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Q7Y1L9 Protein SPIRAL1-like 13.2e-1850Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPR---KPQVSKVVLP-----PPYGIDLNPDDHNNNPSPSPKQLV-------SNNNYPRAHGQNSGNFITDRPSTKVK
        MSRGGS GGG+SSLGYLFG ++ P+   KP  +    P     P   +    +  +   + + KQ+        SNNNY RA GQN+GNF+TDRPSTKV 
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPR---KPQVSKVVLP-----PPYGIDLNPDDHNNNPSPSPKQLV-------SNNNYPRAHGQNSGNFITDRPSTKVK

Query:  SAPGGDSSLGYLFG
        +APGG SSLGYLFG
Subjt:  SAPGGDSSLGYLFG

Q8LGD1 Protein SPIRAL1-like 58.4e-2761.76Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        MSRGGS+GGG+SSLGYLFG D++ P+ P       P PPYG+D   +DH  +  P     +SNNNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLF
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Query:  GD
        GD
Subjt:  GD

Q9LE54 Protein SPIRAL1-like 26.0e-1752.34Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS
        M RG S GGG+SSLGYLFG  + P+   V+K           PP      N  D +    P+     S NNY RA GQN+GNFITDRPSTKV SAPGG S
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS

Query:  SLGYLFG
        SL YLFG
Subjt:  SLGYLFG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.5e-1847.41Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLV-----------------SNNNYPRAHGQNSGNFITDRPSTK
        M RG S GGG+SSLGYLFG  + P KP ++    P    + ++ D       PSPK +                  S NNY RA GQN+GNF+TDRPSTK
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLV-----------------SNNNYPRAHGQNSGNFITDRPSTK

Query:  VKSAPGGDSSLGYLFG
        V +APGG SSL YLFG
Subjt:  VKSAPGGDSSLGYLFG

AT1G69230.1 SPIRAL1-like24.3e-1852.34Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS
        M RG S GGG+SSLGYLFG  + P+   V+K           PP      N  D +    P+     S NNY RA GQN+GNFITDRPSTKV SAPGG S
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS

Query:  SLGYLFG
        SL YLFG
Subjt:  SLGYLFG

AT1G69230.2 SPIRAL1-like24.3e-1852.34Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS
        M RG S GGG+SSLGYLFG  + P+   V+K           PP      N  D +    P+     S NNY RA GQN+GNFITDRPSTKV SAPGG S
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS

Query:  SLGYLFG
        SL YLFG
Subjt:  SLGYLFG

AT2G03680.1 spiral12.6e-1545.16Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSP-----------------SPKQLVSN---------NNYPRAHGQNSGN
        M RG S GGG+SSL YLFG D    KP    V  P P      P + NN P+P                  P +L            NNY RA GQN+GN
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSP-----------------SPKQLVSN---------NNYPRAHGQNSGN

Query:  FITDRPSTKVKSAPGGDSSLGYLF
        F+TDRPSTKV +APGG SSL YLF
Subjt:  FITDRPSTKVKSAPGGDSSLGYLF

AT4G23496.1 SPIRAL1-like56.0e-2861.76Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        MSRGGS+GGG+SSLGYLFG D++ P+ P       P PPYG+D   +DH  +  P     +SNNNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLF
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Query:  GD
        GD
Subjt:  GD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAAGGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTCTTCCTCCTCC
TTATGGTATTGATCTTAACCCTGATGATCATAATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCACGGCCAAAACTCCGGCA
ACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCTCCGGGTGGCGATTCGTCGTTAGGGTATCTGTTTGGTGATATCACCAAACAGTGA
mRNA sequenceShow/hide mRNA sequence
CTTCACACTCATAAAGATTATATATATAAATTAACCAACCAAAATTAGGGTTTTAAACTTTCTTTTGTGTTCTTGGTGTAGTAAAGCTGAAGATCAGATCCAGCCACAAA
TCCAAATATCATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAAGGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTC
TTCCTCCTCCTTATGGTATTGATCTTAACCCTGATGATCATAATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCACGGCCAA
AACTCCGGCAACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCTCCGGGTGGCGATTCGTCGTTAGGGTATCTGTTTGGTGATATCACCAAACAGTGAAATAT
ATGAATGAGTATGTCTTTTGATTTACTCTCTCTAGCTGACTATATATGAAAAAAAATCTAAAGGGGTATGGTTTAGTATGAGTGGTTCTTTTACTAAATAAATGTGTGCA
ATTATTATGTTTAGTATTTGAAAGGAAACATATGTAGCTTGAATTTGTGTAGCCTATGCCTATATATTTGTGTGTATGTATATATAGTTTGGCGTAGTTTGTACTTGTGT
TTATATAGTGATCTATTTGTTAAACAAATCTGATGATTCAGATATCTATGTATTGAAAAATAGCATCATGATGATTGTAGTTCTTTATTGTGTCAATTTCTCAAAAAATG
TGAGGACCATATACACCTGAAATTGCTC
Protein sequenceShow/hide protein sequence
MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDITKQ