CuGenDBv2

Gene ID	CsGy4G006850
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	embryo defective 3006
Genome location	Gy14Chr4:4952083..4957355
RNA-Seq Expression	CsGy4G006850
Synteny	CsGy4G006850
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domains	IPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008451872.1 PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo]

4.48e-101

92.73

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        MG+KHE+D PV+SRQIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLV DNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNIVEI NFLSM K EEIQHLKDMLKTAEEQN VIQGRID LRKGVQDASGMADAVKKLR+
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

XP_011653244.1 uncharacterized protein LOC101212745 [Cucumis sativus]

6.20e-113

100

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]

2.68e-95

87.88

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        M +KHE+  PVSS QIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQVGLV DNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNI+EI N+LSMTKK EIQHLKDMLKTAEEQN  +QGRID LRKGVQDAS M DAV+KLRN
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]

1.27e-93

86.67

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        M +KHE+  PVSS QIDLKKSFKLAVR LLTSCSR EFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET+VGLV DNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNI+EI N+LSMTKK EIQHLKDMLKTAEEQN  +QGRID LRKGVQDAS M DAV+KLRN
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

XP_038876216.1 uncharacterized protein LOC120068468 [Benincasa hispida]

1.23e-93

87.8

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        M +K E+D PVSS QIDLKKSFKLAVR LLTSCSREEFRECFS+FT AEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQVGLV DNVEQLLEEQ+LDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLR
        YSKKTNI+EI NFLS+TKK EIQHLKDMLKTAEEQN +IQGRID LRKGVQDAS MADAVKKLR
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV94 Uncharacterized protein

3.00e-113

100

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

A0A1S3BTB0 uncharacterized protein LOC103493030

2.17e-101

92.73

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        MG+KHE+D PV+SRQIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLV DNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNIVEI NFLSM K EEIQHLKDMLKTAEEQN VIQGRID LRKGVQDASGMADAVKKLR+
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

A0A5A7TAS4 Uncharacterized protein

2.17e-101

92.73

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        MG+KHE+D PV+SRQIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLV DNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNIVEI NFLSM K EEIQHLKDMLKTAEEQN VIQGRID LRKGVQDASGMADAVKKLR+
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X1

1.30e-95

87.88

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        M +KHE+  PVSS QIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQVGLV DNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNI+EI N+LSMTKK EIQHLKDMLKTAEEQN  +QGRID LRKGVQDAS M DAV+KLRN
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X1

6.15e-94

86.67

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Query:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL
        M +KHE+  PVSS QIDLKKSFKLAVR LLTSCSR EFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET+VGLV DNVEQLLEEQDLDPL
Subjt:  MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPL

Query:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN
        YSKKTNI+EI N+LSMTKK EIQHLKDMLKTAEEQN  +QGRID LRKGVQDAS M DAV+KLRN
Subjt:  YSKKTNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G19350.1 embryo defective 3006

4.2e-36

49.69

Show/hide

Query:  HELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPLYSKK
        HE D    SR+  LKKSFK  +R LLT+CS+++F + FS+F+ AEQ+ L +L+ +V+ +LH  IE+EF+  C ETQVG + D VE+L+EEQ LDPL+S K
Subjt:  HELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPLYSKK

Query:  TNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKL
        T+++ I   L+ +KK EIQ L  +L+ AEEQN   + RI  L+K  QD SG AD ++KL
Subjt:  TNIVEIYNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKL

Sequences

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CDS sequence

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ATGGGGGAGAAGCACGAGCTTGATGCTCCGGTGAGCTCCAGACAGATCGATCTGAAGAAGTCCTTCAAGCTTGCTGTTCGTCCTCTCCTTACTTCCTGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGACTGCAGAGCAAGATTATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTCTTCATGGAAACATAGAGGACGAGTTTGAGT
CATTATGTGTTGAAACACAGGTGGGACTTGTATTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCAAAGAAGACCAATATAGTGGAAATA
TATAATTTTCTGTCCATGACAAAGAAGGAGGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACTGGGTTATTCAAGGCCGTATTGATGATTTAAG
GAAAGGAGTGCAAGATGCCTCTGGCATGGCAGATGCTGTTAAAAAGCTAAGAAACTAA

mRNA sequence

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CCGCTAACTACTTCAGAATTTTCGGACTTCAATTTCTTTGTCAGCTTGCCGTTCCTCTATTCGTCGCCGCCAATCGACGGCACTGACGGGGCTCAACTCACCAACTCGTT
TCACTTACAGCCGCTTTCGAATTTCTTCTTCCCGTCGTTGTTCCGCCATTTTTATCAAGTTTAATGTCAGCGCAGATTTTAGCAAGATAGGGTTGGGAATCGTAGTGTAC
AAAAATTTTGAATATGGGGGAGAAGCACGAGCTTGATGCTCCGGTGAGCTCCAGACAGATCGATCTGAAGAAGTCCTTCAAGCTTGCTGTTCGTCCTCTCCTTACTTCCT
GTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGAGATTTACGACTGCAGAGCAAGATTATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTCTTCATGGAAACATAGAG
GACGAGTTTGAGTCATTATGTGTTGAAACACAGGTGGGACTTGTATTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCAAAGAAGACCAA
TATAGTGGAAATATATAATTTTCTGTCCATGACAAAGAAGGAGGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACTGGGTTATTCAAGGCCGTA
TTGATGATTTAAGGAAAGGAGTGCAAGATGCCTCTGGCATGGCAGATGCTGTTAAAAAGCTAAGAAACTAATGCAGATCTTATGGAACTGATGGTGTTAATGAGACCTTC
GATATACTTAACTGATGCTGTTAAATAGCAAGGCTTTATCATCCTCTTTGCAATGAAGATTGTAATCACAATGCAGTGGCATCTATCAAGCACAAACACTCTATTTTAGG
TAGAGTGCCTGACACGTAAGTGTGCATGTCCTATTTTTATTTAAGATAATTGCAATGAGTATCATTTTTAATAATTAAGTGCATACGAACATTTTAAAAAAATTGCAACT
TTAGTAATGGACTCAATCGTGGATAGACTTTGAAAGTGCATCTAGTTTTGGGTTTGATTGTAAACTTGCAACTCTGGTACAAATCCATTTTTTAAACCAAGGATATAACA
TAAACATAAAAGACTGAAGTTTGAATCCAAAACGTTTCATCTCTTATGATTGATAGTTAACT

Protein sequence

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MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPLYSKKTNIVEI
YNFLSMTKKEEIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN

CsGy4G006850 (gene) of Cucumber (Gy14) v2.1 genome